RNA–Protein interactions for RNA: ENST00000583213.1

TNFAIP1-206, Transcript of TNF alpha induced protein 1, humanhuman

TSL 3

Gene TNFAIP1, Length 582 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-206ENST00000583213 NISCHQ9Y2I1 1504 aa40.62■■■■■ 4.09
TNFAIP1-206ENST00000583213 CCDC180Q9P1Z9 1646 aa36.5■■■■□ 3.43
TNFAIP1-206ENST00000583213 ABCC9O60706 1549 aa36.28■■■■□ 3.4
TNFAIP1-206ENST00000583213 RB1CC1Q8TDY2 1594 aa34.66■■■■□ 3.14
TNFAIP1-206ENST00000583213 NACADO15069 1562 aa34.47■■■■□ 3.11
TNFAIP1-206ENST00000583213 MYO15BQ96JP2 1530 aa34.11■■■■□ 3.05
TNFAIP1-206ENST00000583213 DNAJC5BQ9UF47 199 aa34.01■■■■□ 3.03
TNFAIP1-206ENST00000583213 DCAF8L2P0C7V8 631 aa33.96■■■■□ 3.03
TNFAIP1-206ENST00000583213 UNC13AQ9UPW8 1703 aa33.88■■■■□ 3.01
TNFAIP1-206ENST00000583213 ZCCHC6Q5VYS8 1495 aaKnown RBP33.71■■■□□ 2.99
TNFAIP1-206ENST00000583213 PABPN1Q86U42 306 aaKnown RBP eCLIP33.71■■■□□ 2.99
TNFAIP1-206ENST00000583213 BICRAQ9NZM4 1560 aa33.69■■■□□ 2.98
TNFAIP1-206ENST00000583213 DCAF1Q9Y4B6 1507 aa33.67■■■□□ 2.98
TNFAIP1-206ENST00000583213 SHROOM4Q9ULL8 1493 aa33.33■■■□□ 2.93
TNFAIP1-206ENST00000583213 SCRIBQ14160 1630 aa33.12■■■□□ 2.89
TNFAIP1-206ENST00000583213 CC2D2AQ9P2K1 1620 aa32.85■■■□□ 2.85
TNFAIP1-206ENST00000583213 EIF4G1Q04637 1599 aaKnown RBP32.82■■■□□ 2.84
TNFAIP1-206ENST00000583213 CECR2Q9BXF3 1484 aa32.73■■■□□ 2.83
TNFAIP1-206ENST00000583213 NCAPD3P42695 1498 aa31.82■■■□□ 2.68
TNFAIP1-206ENST00000583213 ATAD2BQ9ULI0 1458 aa31.7■■■□□ 2.66
TNFAIP1-206ENST00000583213 SMARCA4P51532 1647 aa31.68■■■□□ 2.66
TNFAIP1-206ENST00000583213 SMARCA2P51531 1590 aa31.62■■■□□ 2.65
TNFAIP1-206ENST00000583213 HMGXB3Q12766 1538 aa31.61■■■□□ 2.65
TNFAIP1-206ENST00000583213 BAZ1AQ9NRL2 1556 aaPredicted RBP31.53■■■□□ 2.64
TNFAIP1-206ENST00000583213 PEG3Q9GZU2 1588 aa31.47■■■□□ 2.63
TNFAIP1-206ENST00000583213 CUX2O14529 1486 aa31.37■■■□□ 2.61
TNFAIP1-206ENST00000583213 BAZ1BQ9UIG0 1483 aaKnown RBP31.34■■■□□ 2.61
TNFAIP1-206ENST00000583213 ERCC6Q03468 1493 aa31.31■■■□□ 2.6
TNFAIP1-206ENST00000583213 MROH2BQ7Z745 1585 aa31.27■■■□□ 2.6
TNFAIP1-206ENST00000583213 DNAJC5Q9H3Z4 198 aa31.23■■■□□ 2.59
TNFAIP1-206ENST00000583213 NESP48681 1621 aa31.2■■■□□ 2.59
TNFAIP1-206ENST00000583213 LAMC3Q9Y6N6 1575 aa31.08■■■□□ 2.57
TNFAIP1-206ENST00000583213 THOC2Q8NI27 1593 aaKnown RBP30.98■■■□□ 2.55
TNFAIP1-206ENST00000583213 WIZO95785 1651 aa30.87■■■□□ 2.53
TNFAIP1-206ENST00000583213 PDS5BQ9NTI5 1447 aa30.85■■■□□ 2.53
TNFAIP1-206ENST00000583213 KIF21AQ7Z4S6 1674 aa30.84■■■□□ 2.53
TNFAIP1-206ENST00000583213 CADPSQ9ULU8 1353 aa30.79■■■□□ 2.52
TNFAIP1-206ENST00000583213 RSF1Q96T23 1441 aaPredicted RBP30.64■■■□□ 2.5
TNFAIP1-206ENST00000583213 MRC2Q9UBG0 1479 aa30.59■■■□□ 2.49
TNFAIP1-206ENST00000583213 WDR62O43379 1518 aa30.57■■■□□ 2.49
TNFAIP1-206ENST00000583213 TOP2AP11388 1531 aaKnown RBP30.54■■■□□ 2.48
TNFAIP1-206ENST00000583213 CFTRP13569 1480 aa30.5■■■□□ 2.47
TNFAIP1-206ENST00000583213 CEP164Q9UPV0 1460 aa30.46■■■□□ 2.47
TNFAIP1-206ENST00000583213 FANCD2Q9BXW9 1451 aa30.44■■■□□ 2.46
TNFAIP1-206ENST00000583213 PRDM2Q13029 1718 aa30.22■■■□□ 2.43
TNFAIP1-206ENST00000583213 URB2Q14146 1524 aaKnown RBP30.21■■■□□ 2.43
TNFAIP1-206ENST00000583213 CCDC88BA6NC98 1476 aa30.15■■■□□ 2.42
TNFAIP1-206ENST00000583213 IFT140Q96RY7 1462 aa29.88■■■□□ 2.37
TNFAIP1-206ENST00000583213 TOPBP1Q92547 1522 aa29.88■■■□□ 2.37
TNFAIP1-206ENST00000583213 ABCC8Q09428 1581 aa29.85■■■□□ 2.37
TNFAIP1-206ENST00000583213 OSCARQ8IYS5 282 aa29.82■■■□□ 2.36
TNFAIP1-206ENST00000583213 DNMBPQ6XZF7 1577 aa29.8■■■□□ 2.36
TNFAIP1-206ENST00000583213 ZNF608Q9ULD9 1512 aaPredicted RBP29.8■■■□□ 2.36
TNFAIP1-206ENST00000583213 TRIM41Q8WV44 630 aa29.69■■■□□ 2.34
TNFAIP1-206ENST00000583213 EIF4G3O43432 1585 aaKnown RBP29.66■■■□□ 2.34
TNFAIP1-206ENST00000583213 TARBP1Q13395 1621 aaKnown RBP29.66■■■□□ 2.34
TNFAIP1-206ENST00000583213 POLA1P09884 1462 aaPredicted RBP29.59■■■□□ 2.33
TNFAIP1-206ENST00000583213 RIMBP3CA6NJZ7 1639 aa29.49■■■□□ 2.31
TNFAIP1-206ENST00000583213 RIMBP3BA6NNM3 1639 aa29.49■■■□□ 2.31
TNFAIP1-206ENST00000583213 RIMBP3Q9UFD9 1639 aa29.49■■■□□ 2.31
TNFAIP1-206ENST00000583213 AQRO60306 1485 aaKnown RBP eCLIP29.49■■■□□ 2.311e-11■■■■□ 24.7
TNFAIP1-206ENST00000583213 WDR97A6NE52 1622 aa29.42■■■□□ 2.3
TNFAIP1-206ENST00000583213 ARHGEF11O15085 1522 aa29.42■■■□□ 2.3
TNFAIP1-206ENST00000583213 RAD54L2Q9Y4B4 1467 aa29.42■■■□□ 2.3
TNFAIP1-206ENST00000583213 CHD1O14646 1710 aa29.41■■■□□ 2.3
TNFAIP1-206ENST00000583213 SOGA1O94964 1423 aa29.39■■■□□ 2.3
TNFAIP1-206ENST00000583213 CUX1P39880 1505 aa29.39■■■□□ 2.3
TNFAIP1-206ENST00000583213 FGD5Q6ZNL6 1462 aa29.38■■■□□ 2.29
TNFAIP1-206ENST00000583213 TDRD9Q8NDG6 1382 aaKnown RBP29.3■■■□□ 2.28
TNFAIP1-206ENST00000583213 SNAPC4Q5SXM2 1469 aa29.23■■■□□ 2.27
TNFAIP1-206ENST00000583213 MAGI1Q96QZ7 1491 aaPredicted RBP29.21■■■□□ 2.27
TNFAIP1-206ENST00000583213 GRIN2BQ13224 1484 aa29.18■■■□□ 2.26
TNFAIP1-206ENST00000583213 FBLN2P98095 1184 aa29.15■■■□□ 2.26
TNFAIP1-206ENST00000583213 CLASP1Q7Z460 1538 aa29.15■■■□□ 2.26
TNFAIP1-206ENST00000583213 ARAP1Q96P48 1450 aa29.14■■■□□ 2.26
TNFAIP1-206ENST00000583213 ABCA10Q8WWZ4 1543 aa29.1■■■□□ 2.25
TNFAIP1-206ENST00000583213 SUPT5HO00267 1087 aaKnown RBP29.09■■■□□ 2.25
TNFAIP1-206ENST00000583213 SYNJ2O15056 1496 aa29.09■■■□□ 2.25
TNFAIP1-206ENST00000583213 SYNJ1O43426 1573 aa29.08■■■□□ 2.25
TNFAIP1-206ENST00000583213 ABCA5Q8WWZ7 1642 aa29.08■■■□□ 2.25
TNFAIP1-206ENST00000583213 PBRM1Q86U86 1689 aa29.07■■■□□ 2.24
TNFAIP1-206ENST00000583213 GAPVD1Q14C86 1478 aa29.06■■■□□ 2.24
TNFAIP1-206ENST00000583213 CYB5RLQ6IPT4 315 aa29.06■■■□□ 2.24
TNFAIP1-206ENST00000583213 CHMP7Q8WUX9 453 aaPredicted RBP29.02■■■□□ 2.24
TNFAIP1-206ENST00000583213 BIVM-ERCC5R4GMW8 1640 aa28.97■■■□□ 2.23
TNFAIP1-206ENST00000583213 TOP2BQ02880 1626 aa28.95■■■□□ 2.23
TNFAIP1-206ENST00000583213 WRNQ14191 1432 aaPredicted RBP eCLIP28.94■■■□□ 2.22
TNFAIP1-206ENST00000583213 ADAMTS12P58397 1594 aa28.84■■■□□ 2.21
TNFAIP1-206ENST00000583213 GRIN2AQ12879 1464 aa28.81■■■□□ 2.2
TNFAIP1-206ENST00000583213 NUP160Q12769 1436 aa28.77■■■□□ 2.2
TNFAIP1-206ENST00000583213 ERICH3Q5RHP9 1530 aa28.74■■■□□ 2.19
TNFAIP1-206ENST00000583213 FHAD1B1AJZ9 1412 aa28.72■■■□□ 2.19
TNFAIP1-206ENST00000583213 CEP170Q5SW79 1584 aa28.71■■■□□ 2.19
TNFAIP1-206ENST00000583213 SHROOM2Q13796 1616 aa28.65■■■□□ 2.18
TNFAIP1-206ENST00000583213 TRHP20396 242 aaPredicted RBP28.65■■■□□ 2.18
TNFAIP1-206ENST00000583213 ERCC6L2Q5T890 1561 aa28.62■■■□□ 2.17
TNFAIP1-206ENST00000583213 RUSC2Q8N2Y8 1516 aa28.43■■■□□ 2.14
TNFAIP1-206ENST00000583213 PRG4Q92954 1404 aaPredicted RBP28.37■■■□□ 2.13
TNFAIP1-206ENST00000583213 JPH4Q96JJ6 628 aa28.34■■■□□ 2.13
TNFAIP1-206ENST00000583213 IGF1RP08069 1367 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms