RNA–Protein interactions for RNA: ENST00000583117.1

LINC00200-202, long intergenic non-protein coding RNA 200, humanhuman

TSL 3

Gene LINC00200, Length 632 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00200-202ENST00000583117 NISCHQ9Y2I1 1504 aa43.58■■■■■ 4.57
LINC00200-202ENST00000583117 CCDC180Q9P1Z9 1646 aa38.74■■■■□ 3.79
LINC00200-202ENST00000583117 ABCC9O60706 1549 aa37.71■■■■□ 3.63
LINC00200-202ENST00000583117 RB1CC1Q8TDY2 1594 aa36.4■■■■□ 3.42
LINC00200-202ENST00000583117 NACADO15069 1562 aa36.4■■■■□ 3.42
LINC00200-202ENST00000583117 ZCCHC6Q5VYS8 1495 aaKnown RBP36.32■■■■□ 3.41
LINC00200-202ENST00000583117 DCAF8L2P0C7V8 631 aa36.32■■■■□ 3.4
LINC00200-202ENST00000583117 MYO15BQ96JP2 1530 aa36.24■■■■□ 3.39
LINC00200-202ENST00000583117 DCAF1Q9Y4B6 1507 aa36.12■■■■□ 3.37
LINC00200-202ENST00000583117 UNC13AQ9UPW8 1703 aa35.52■■■■□ 3.28
LINC00200-202ENST00000583117 SCRIBQ14160 1630 aa35.28■■■■□ 3.24
LINC00200-202ENST00000583117 PABPN1Q86U42 306 aaKnown RBP eCLIP35.23■■■■□ 3.23
LINC00200-202ENST00000583117 BICRAQ9NZM4 1560 aa35.22■■■■□ 3.23
LINC00200-202ENST00000583117 SHROOM4Q9ULL8 1493 aa34.99■■■■□ 3.19
LINC00200-202ENST00000583117 DNAJC5BQ9UF47 199 aa34.44■■■■□ 3.1
LINC00200-202ENST00000583117 EIF4G1Q04637 1599 aaKnown RBP34.32■■■■□ 3.08
LINC00200-202ENST00000583117 CC2D2AQ9P2K1 1620 aa34.14■■■■□ 3.06
LINC00200-202ENST00000583117 CECR2Q9BXF3 1484 aa33.89■■■■□ 3.02
LINC00200-202ENST00000583117 BAZ1AQ9NRL2 1556 aaPredicted RBP33.81■■■■□ 3
LINC00200-202ENST00000583117 SMARCA4P51532 1647 aa33.79■■■■□ 3
LINC00200-202ENST00000583117 SMARCA2P51531 1590 aa33.59■■■□□ 2.97
LINC00200-202ENST00000583117 ATAD2BQ9ULI0 1458 aa33.57■■■□□ 2.97
LINC00200-202ENST00000583117 NCAPD3P42695 1498 aa33.56■■■□□ 2.96
LINC00200-202ENST00000583117 MROH2BQ7Z745 1585 aa33.55■■■□□ 2.96
LINC00200-202ENST00000583117 PEG3Q9GZU2 1588 aa33.49■■■□□ 2.95
LINC00200-202ENST00000583117 HMGXB3Q12766 1538 aa33.42■■■□□ 2.94
LINC00200-202ENST00000583117 BAZ1BQ9UIG0 1483 aaKnown RBP33.32■■■□□ 2.92
LINC00200-202ENST00000583117 RSF1Q96T23 1441 aaPredicted RBP33.22■■■□□ 2.91
LINC00200-202ENST00000583117 WIZO95785 1651 aa33.2■■■□□ 2.9
LINC00200-202ENST00000583117 TOP2AP11388 1531 aaKnown RBP32.89■■■□□ 2.86
LINC00200-202ENST00000583117 LAMC3Q9Y6N6 1575 aa32.67■■■□□ 2.82
LINC00200-202ENST00000583117 NESP48681 1621 aa32.64■■■□□ 2.82
LINC00200-202ENST00000583117 CADPSQ9ULU8 1353 aa32.58■■■□□ 2.81
LINC00200-202ENST00000583117 ERCC6Q03468 1493 aa32.54■■■□□ 2.8
LINC00200-202ENST00000583117 CCDC88BA6NC98 1476 aa32.48■■■□□ 2.79
LINC00200-202ENST00000583117 PDS5BQ9NTI5 1447 aa32.45■■■□□ 2.79
LINC00200-202ENST00000583117 SUPT5HO00267 1087 aaKnown RBP32.45■■■□□ 2.79
LINC00200-202ENST00000583117 CFTRP13569 1480 aa32.42■■■□□ 2.78
LINC00200-202ENST00000583117 KIF21AQ7Z4S6 1674 aa32.3■■■□□ 2.76
LINC00200-202ENST00000583117 PRDM2Q13029 1718 aa32.2■■■□□ 2.75
LINC00200-202ENST00000583117 FANCD2Q9BXW9 1451 aa32.2■■■□□ 2.75
LINC00200-202ENST00000583117 CUX2O14529 1486 aa32.18■■■□□ 2.74
LINC00200-202ENST00000583117 CEP164Q9UPV0 1460 aa32.16■■■□□ 2.74
LINC00200-202ENST00000583117 THOC2Q8NI27 1593 aaKnown RBP32.16■■■□□ 2.74
LINC00200-202ENST00000583117 MRC2Q9UBG0 1479 aa32.09■■■□□ 2.73
LINC00200-202ENST00000583117 WDR62O43379 1518 aa31.97■■■□□ 2.71
LINC00200-202ENST00000583117 URB2Q14146 1524 aaKnown RBP31.84■■■□□ 2.69
LINC00200-202ENST00000583117 ABCC8Q09428 1581 aa31.77■■■□□ 2.68
LINC00200-202ENST00000583117 TOPBP1Q92547 1522 aa31.7■■■□□ 2.66
LINC00200-202ENST00000583117 DNMBPQ6XZF7 1577 aa31.68■■■□□ 2.66
LINC00200-202ENST00000583117 IFT140Q96RY7 1462 aa31.49■■■□□ 2.63
LINC00200-202ENST00000583117 CUX1P39880 1505 aa31.48■■■□□ 2.63
LINC00200-202ENST00000583117 POLA1P09884 1462 aaPredicted RBP31.42■■■□□ 2.62
LINC00200-202ENST00000583117 FGD5Q6ZNL6 1462 aa31.36■■■□□ 2.61
LINC00200-202ENST00000583117 WRNQ14191 1432 aaPredicted RBP eCLIP31.35■■■□□ 2.61
LINC00200-202ENST00000583117 TARBP1Q13395 1621 aaKnown RBP31.33■■■□□ 2.61
LINC00200-202ENST00000583117 SOGA1O94964 1423 aa31.32■■■□□ 2.6
LINC00200-202ENST00000583117 TOP2BQ02880 1626 aa31.27■■■□□ 2.6
LINC00200-202ENST00000583117 ZNF608Q9ULD9 1512 aaPredicted RBP31.27■■■□□ 2.6
LINC00200-202ENST00000583117 BIVM-ERCC5R4GMW8 1640 aa31.27■■■□□ 2.6
LINC00200-202ENST00000583117 RAD54L2Q9Y4B4 1467 aa31.26■■■□□ 2.59
LINC00200-202ENST00000583117 SYNJ1O43426 1573 aa31.22■■■□□ 2.59
LINC00200-202ENST00000583117 EIF4G3O43432 1585 aaKnown RBP31.19■■■□□ 2.58
LINC00200-202ENST00000583117 WDR97A6NE52 1622 aa31.17■■■□□ 2.58
LINC00200-202ENST00000583117 AQRO60306 1485 aaKnown RBP eCLIP31.12■■■□□ 2.57
LINC00200-202ENST00000583117 ABCA10Q8WWZ4 1543 aa31.09■■■□□ 2.57
LINC00200-202ENST00000583117 TDRD9Q8NDG6 1382 aaKnown RBP31.09■■■□□ 2.57
LINC00200-202ENST00000583117 DNAJC5Q9H3Z4 198 aa31.01■■■□□ 2.55
LINC00200-202ENST00000583117 GRIN2BQ13224 1484 aa30.95■■■□□ 2.55
LINC00200-202ENST00000583117 GAPVD1Q14C86 1478 aa30.95■■■□□ 2.55
LINC00200-202ENST00000583117 ABCA5Q8WWZ7 1642 aa30.95■■■□□ 2.54
LINC00200-202ENST00000583117 PBRM1Q86U86 1689 aa30.88■■■□□ 2.53
LINC00200-202ENST00000583117 MAGI1Q96QZ7 1491 aaPredicted RBP30.87■■■□□ 2.53
LINC00200-202ENST00000583117 OSCARQ8IYS5 282 aa30.86■■■□□ 2.53
LINC00200-202ENST00000583117 SNAPC4Q5SXM2 1469 aa30.85■■■□□ 2.53
LINC00200-202ENST00000583117 CHD1O14646 1710 aa30.76■■■□□ 2.52
LINC00200-202ENST00000583117 ERICH3Q5RHP9 1530 aa30.74■■■□□ 2.51
LINC00200-202ENST00000583117 FBLN2P98095 1184 aa30.74■■■□□ 2.51
LINC00200-202ENST00000583117 SYNJ2O15056 1496 aa30.73■■■□□ 2.51
LINC00200-202ENST00000583117 CHMP7Q8WUX9 453 aaPredicted RBP30.71■■■□□ 2.51
LINC00200-202ENST00000583117 KIF27Q86VH2 1401 aa30.71■■■□□ 2.51
LINC00200-202ENST00000583117 TRIM41Q8WV44 630 aa30.69■■■□□ 2.5
LINC00200-202ENST00000583117 ADAMTS12P58397 1594 aa30.63■■■□□ 2.49
LINC00200-202ENST00000583117 FHAD1B1AJZ9 1412 aa30.62■■■□□ 2.49
LINC00200-202ENST00000583117 GRIN2AQ12879 1464 aa30.54■■■□□ 2.48
LINC00200-202ENST00000583117 IGF1RP08069 1367 aa30.54■■■□□ 2.48
LINC00200-202ENST00000583117 CUL7Q14999 1698 aa30.49■■■□□ 2.47
LINC00200-202ENST00000583117 CLASP1Q7Z460 1538 aa30.45■■■□□ 2.47
LINC00200-202ENST00000583117 NUP160Q12769 1436 aa30.39■■■□□ 2.46
LINC00200-202ENST00000583117 CARMIL1Q5VZK9 1371 aa30.37■■■□□ 2.45
LINC00200-202ENST00000583117 RUSC2Q8N2Y8 1516 aa30.37■■■□□ 2.45
LINC00200-202ENST00000583117 CHIC1Q5VXU3 224 aa30.36■■■□□ 2.45
LINC00200-202ENST00000583117 CEP170Q5SW79 1584 aa30.35■■■□□ 2.45
LINC00200-202ENST00000583117 ARHGEF11O15085 1522 aa30.32■■■□□ 2.44
LINC00200-202ENST00000583117 RIMBP3CA6NJZ7 1639 aa30.31■■■□□ 2.44
LINC00200-202ENST00000583117 RIMBP3BA6NNM3 1639 aa30.31■■■□□ 2.44
LINC00200-202ENST00000583117 RIMBP3Q9UFD9 1639 aa30.31■■■□□ 2.44
LINC00200-202ENST00000583117 EEA1Q15075 1411 aa30.23■■■□□ 2.43
LINC00200-202ENST00000583117 RAPGEF2Q9Y4G8 1499 aa30.22■■■□□ 2.43
LINC00200-202ENST00000583117 SHROOM2Q13796 1616 aa30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms