RNA–Protein interactions for RNA: ENST00000582923.1

PDLIM1P2-201, Transcript of PDZ and LIM domain 1 pseudogene 2, humanhuman

BASIC

Gene PDLIM1P2, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P2-201ENST00000582923 NISCHQ9Y2I1 1504 aa21.44■■□□□ 1.02
PDLIM1P2-201ENST00000582923 CCDC180Q9P1Z9 1646 aa18.97■□□□□ 0.63
PDLIM1P2-201ENST00000582923 ABCC9O60706 1549 aa18.21■□□□□ 0.51
PDLIM1P2-201ENST00000582923 ZCCHC6Q5VYS8 1495 aaKnown RBP17.95■□□□□ 0.46
PDLIM1P2-201ENST00000582923 DCAF8L2P0C7V8 631 aa17.78■□□□□ 0.44
PDLIM1P2-201ENST00000582923 DCAF1Q9Y4B6 1507 aa17.74■□□□□ 0.43
PDLIM1P2-201ENST00000582923 NACADO15069 1562 aa17.71■□□□□ 0.43
PDLIM1P2-201ENST00000582923 RB1CC1Q8TDY2 1594 aa17.68■□□□□ 0.42
PDLIM1P2-201ENST00000582923 MYO15BQ96JP2 1530 aa17.67■□□□□ 0.42
PDLIM1P2-201ENST00000582923 SCRIBQ14160 1630 aa17.36■□□□□ 0.37
PDLIM1P2-201ENST00000582923 UNC13AQ9UPW8 1703 aa17.27■□□□□ 0.36
PDLIM1P2-201ENST00000582923 SHROOM4Q9ULL8 1493 aa17.18■□□□□ 0.34
PDLIM1P2-201ENST00000582923 BICRAQ9NZM4 1560 aa17.09■□□□□ 0.33
PDLIM1P2-201ENST00000582923 PABPN1Q86U42 306 aaKnown RBP eCLIP17.03■□□□□ 0.32
PDLIM1P2-201ENST00000582923 CECR2Q9BXF3 1484 aa16.65■□□□□ 0.26
PDLIM1P2-201ENST00000582923 EIF4G1Q04637 1599 aaKnown RBP16.64■□□□□ 0.25
PDLIM1P2-201ENST00000582923 BAZ1AQ9NRL2 1556 aaPredicted RBP16.63■□□□□ 0.25
PDLIM1P2-201ENST00000582923 SMARCA4P51532 1647 aa16.6■□□□□ 0.25
PDLIM1P2-201ENST00000582923 MROH2BQ7Z745 1585 aa16.53■□□□□ 0.24
PDLIM1P2-201ENST00000582923 CC2D2AQ9P2K1 1620 aa16.48■□□□□ 0.23
PDLIM1P2-201ENST00000582923 RSF1Q96T23 1441 aaPredicted RBP16.45■□□□□ 0.22
PDLIM1P2-201ENST00000582923 SMARCA2P51531 1590 aa16.42■□□□□ 0.22
PDLIM1P2-201ENST00000582923 WIZO95785 1651 aa16.4■□□□□ 0.22
PDLIM1P2-201ENST00000582923 PEG3Q9GZU2 1588 aa16.39■□□□□ 0.21
PDLIM1P2-201ENST00000582923 ATAD2BQ9ULI0 1458 aa16.38■□□□□ 0.21
PDLIM1P2-201ENST00000582923 HMGXB3Q12766 1538 aa16.31■□□□□ 0.2
PDLIM1P2-201ENST00000582923 BAZ1BQ9UIG0 1483 aaKnown RBP16.31■□□□□ 0.2
PDLIM1P2-201ENST00000582923 SUPT5HO00267 1087 aaKnown RBP16.31■□□□□ 0.2
PDLIM1P2-201ENST00000582923 NCAPD3P42695 1498 aa16.29■□□□□ 0.2
PDLIM1P2-201ENST00000582923 DNAJC5BQ9UF47 199 aa16.29■□□□□ 0.2
PDLIM1P2-201ENST00000582923 TOP2AP11388 1531 aaKnown RBP16.25■□□□□ 0.19
PDLIM1P2-201ENST00000582923 CCDC88BA6NC98 1476 aa16.02■□□□□ 0.15
PDLIM1P2-201ENST00000582923 LAMC3Q9Y6N6 1575 aa15.87■□□□□ 0.13
PDLIM1P2-201ENST00000582923 CADPSQ9ULU8 1353 aa15.85■□□□□ 0.13
PDLIM1P2-201ENST00000582923 NESP48681 1621 aa15.84■□□□□ 0.13
PDLIM1P2-201ENST00000582923 CFTRP13569 1480 aa15.84■□□□□ 0.13
PDLIM1P2-201ENST00000582923 PRDM2Q13029 1718 aa15.83■□□□□ 0.13
PDLIM1P2-201ENST00000582923 CHIC1Q5VXU3 224 aa15.81■□□□□ 0.12
PDLIM1P2-201ENST00000582923 PDS5BQ9NTI5 1447 aa15.73■□□□□ 0.11
PDLIM1P2-201ENST00000582923 KIF21AQ7Z4S6 1674 aa15.71■□□□□ 0.11
PDLIM1P2-201ENST00000582923 FANCD2Q9BXW9 1451 aa15.71■□□□□ 0.1
PDLIM1P2-201ENST00000582923 ERCC6Q03468 1493 aa15.7■□□□□ 0.1
PDLIM1P2-201ENST00000582923 CEP164Q9UPV0 1460 aa15.68■□□□□ 0.1
PDLIM1P2-201ENST00000582923 ABCC8Q09428 1581 aa15.58■□□□□ 0.09
PDLIM1P2-201ENST00000582923 MRC2Q9UBG0 1479 aa15.58■□□□□ 0.08
PDLIM1P2-201ENST00000582923 THOC2Q8NI27 1593 aaKnown RBP15.57■□□□□ 0.08
PDLIM1P2-201ENST00000582923 WRNQ14191 1432 aaPredicted RBP eCLIP15.53■□□□□ 0.08
PDLIM1P2-201ENST00000582923 DNMBPQ6XZF7 1577 aa15.53■□□□□ 0.08
PDLIM1P2-201ENST00000582923 URB2Q14146 1524 aaKnown RBP15.52■□□□□ 0.07
PDLIM1P2-201ENST00000582923 WDR62O43379 1518 aa15.51■□□□□ 0.07
PDLIM1P2-201ENST00000582923 CUX1P39880 1505 aa15.51■□□□□ 0.07
PDLIM1P2-201ENST00000582923 SYNJ1O43426 1573 aa15.49■□□□□ 0.07
PDLIM1P2-201ENST00000582923 TOPBP1Q92547 1522 aa15.49■□□□□ 0.07
PDLIM1P2-201ENST00000582923 BIVM-ERCC5R4GMW8 1640 aa15.48■□□□□ 0.07
PDLIM1P2-201ENST00000582923 TOP2BQ02880 1626 aa15.47■□□□□ 0.07
PDLIM1P2-201ENST00000582923 AEBP2Q6ZN18 517 aaPredicted RBP15.42■□□□□ 0.06
PDLIM1P2-201ENST00000582923 FGD5Q6ZNL6 1462 aa15.41■□□□□ 0.06
PDLIM1P2-201ENST00000582923 TRIM41Q8WV44 630 aa15.38■□□□□ 0.05
PDLIM1P2-201ENST00000582923 POLA1P09884 1462 aaPredicted RBP15.38■□□□□ 0.05
PDLIM1P2-201ENST00000582923 CUX2O14529 1486 aa15.37■□□□□ 0.05
PDLIM1P2-201ENST00000582923 IFT140Q96RY7 1462 aa15.31■□□□□ 0.04
PDLIM1P2-201ENST00000582923 SOGA1O94964 1423 aa15.3■□□□□ 0.04
PDLIM1P2-201ENST00000582923 TARBP1Q13395 1621 aaKnown RBP15.3■□□□□ 0.04
PDLIM1P2-201ENST00000582923 RAD54L2Q9Y4B4 1467 aa15.3■□□□□ 0.04
PDLIM1P2-201ENST00000582923 WDR97A6NE52 1622 aa15.29■□□□□ 0.04
PDLIM1P2-201ENST00000582923 ABCA10Q8WWZ4 1543 aa15.25■□□□□ 0.03
PDLIM1P2-201ENST00000582923 EIF4G3O43432 1585 aaKnown RBP15.22■□□□□ 0.03
PDLIM1P2-201ENST00000582923 ZNF608Q9ULD9 1512 aaPredicted RBP15.2■□□□□ 0.02
PDLIM1P2-201ENST00000582923 ABCA5Q8WWZ7 1642 aa15.2■□□□□ 0.02
PDLIM1P2-201ENST00000582923 TDRD9Q8NDG6 1382 aaKnown RBP15.18■□□□□ 0.02
PDLIM1P2-201ENST00000582923 KIF27Q86VH2 1401 aa15.17■□□□□ 0.02
PDLIM1P2-201ENST00000582923 PBRM1Q86U86 1689 aa15.16■□□□□ 0.02
PDLIM1P2-201ENST00000582923 GAPVD1Q14C86 1478 aa15.15■□□□□ 0.02
PDLIM1P2-201ENST00000582923 AQRO60306 1485 aaKnown RBP eCLIP15.14■□□□□ 0.01
PDLIM1P2-201ENST00000582923 RUSC2Q8N2Y8 1516 aa15.12■□□□□ 0.01
PDLIM1P2-201ENST00000582923 EEA1Q15075 1411 aa15.11■□□□□ 0.01
PDLIM1P2-201ENST00000582923 GRIN2BQ13224 1484 aa15.11■□□□□ 0.01
PDLIM1P2-201ENST00000582923 ERICH3Q5RHP9 1530 aa15.09■□□□□ 0.01
PDLIM1P2-201ENST00000582923 FAM9AQ8IZU1 332 aaPredicted RBP15.08■□□□□ 0
PDLIM1P2-201ENST00000582923 CUL7Q14999 1698 aa15.06■□□□□ 0
PDLIM1P2-201ENST00000582923 SNAPC4Q5SXM2 1469 aa15.06■□□□□ 0
PDLIM1P2-201ENST00000582923 ADAMTS12P58397 1594 aa15.05■□□□□ -0
PDLIM1P2-201ENST00000582923 MAGI1Q96QZ7 1491 aaPredicted RBP15.03■□□□□ -0
PDLIM1P2-201ENST00000582923 IGF1RP08069 1367 aa15.01□□□□□ -0.01
PDLIM1P2-201ENST00000582923 CSRNP3Q8WYN3 585 aa14.99□□□□□ -0.01
PDLIM1P2-201ENST00000582923 FHAD1B1AJZ9 1412 aa14.98□□□□□ -0.01
PDLIM1P2-201ENST00000582923 SYNJ2O15056 1496 aa14.97□□□□□ -0.01
PDLIM1P2-201ENST00000582923 CHD1O14646 1710 aa14.97□□□□□ -0.01
PDLIM1P2-201ENST00000582923 KIF21BO75037 1637 aa14.96□□□□□ -0.01
PDLIM1P2-201ENST00000582923 CARMIL1Q5VZK9 1371 aa14.96□□□□□ -0.02
PDLIM1P2-201ENST00000582923 PRXQ9BXM0 1461 aa14.95□□□□□ -0.02
PDLIM1P2-201ENST00000582923 RAPGEF2Q9Y4G8 1499 aa14.94□□□□□ -0.02
PDLIM1P2-201ENST00000582923 FBLN2P98095 1184 aa14.92□□□□□ -0.02
PDLIM1P2-201ENST00000582923 GRIN2AQ12879 1464 aa14.92□□□□□ -0.02
PDLIM1P2-201ENST00000582923 CHMP7Q8WUX9 453 aaPredicted RBP14.91□□□□□ -0.02
PDLIM1P2-201ENST00000582923 GOLGA3Q08378 1498 aa14.9□□□□□ -0.02
PDLIM1P2-201ENST00000582923 EHMT2Q96KQ7 1210 aa14.88□□□□□ -0.03
PDLIM1P2-201ENST00000582923 CTTNBP2Q8WZ74 1663 aa14.84□□□□□ -0.03
PDLIM1P2-201ENST00000582923 CEP170Q5SW79 1584 aa14.84□□□□□ -0.03
PDLIM1P2-201ENST00000582923 NUP160Q12769 1436 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms