RNA–Protein interactions for RNA: ENST00000582880.6

RBFOX3-209, Transcript of RNA binding fox-1 homolog 3, humanhuman

TSL 3

Gene RBFOX3, Length 877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-209ENST00000582880 NISCHQ9Y2I1 1504 aa42.04■■■■■ 4.32
RBFOX3-209ENST00000582880 CCDC180Q9P1Z9 1646 aa37.75■■■■□ 3.63
RBFOX3-209ENST00000582880 ABCC9O60706 1549 aa37.06■■■■□ 3.52
RBFOX3-209ENST00000582880 RB1CC1Q8TDY2 1594 aa35.59■■■■□ 3.29
RBFOX3-209ENST00000582880 NACADO15069 1562 aa35.42■■■■□ 3.26
RBFOX3-209ENST00000582880 MYO15BQ96JP2 1530 aa35.06■■■■□ 3.2
RBFOX3-209ENST00000582880 DCAF8L2P0C7V8 631 aa35.04■■■■□ 3.2
RBFOX3-209ENST00000582880 ZCCHC6Q5VYS8 1495 aaKnown RBP35■■■■□ 3.19
RBFOX3-209ENST00000582880 UNC13AQ9UPW8 1703 aa35■■■■□ 3.19
RBFOX3-209ENST00000582880 DCAF1Q9Y4B6 1507 aa34.79■■■■□ 3.16
RBFOX3-209ENST00000582880 BICRAQ9NZM4 1560 aa34.51■■■■□ 3.12
RBFOX3-209ENST00000582880 PABPN1Q86U42 306 aaKnown RBP eCLIP34.41■■■■□ 3.1
RBFOX3-209ENST00000582880 SCRIBQ14160 1630 aa34.34■■■■□ 3.09
RBFOX3-209ENST00000582880 DNAJC5BQ9UF47 199 aa34.14■■■■□ 3.06
RBFOX3-209ENST00000582880 SHROOM4Q9ULL8 1493 aa34.13■■■■□ 3.05
RBFOX3-209ENST00000582880 EIF4G1Q04637 1599 aaKnown RBP33.64■■■□□ 2.98
RBFOX3-209ENST00000582880 CC2D2AQ9P2K1 1620 aa33.61■■■□□ 2.97
RBFOX3-209ENST00000582880 CECR2Q9BXF3 1484 aa33.33■■■□□ 2.93
RBFOX3-209ENST00000582880 SMARCA4P51532 1647 aa32.8■■■□□ 2.84
RBFOX3-209ENST00000582880 BAZ1AQ9NRL2 1556 aaPredicted RBP32.66■■■□□ 2.82
RBFOX3-209ENST00000582880 SMARCA2P51531 1590 aa32.61■■■□□ 2.81
RBFOX3-209ENST00000582880 ATAD2BQ9ULI0 1458 aa32.58■■■□□ 2.81
RBFOX3-209ENST00000582880 NCAPD3P42695 1498 aa32.57■■■□□ 2.8
RBFOX3-209ENST00000582880 HMGXB3Q12766 1538 aa32.55■■■□□ 2.8
RBFOX3-209ENST00000582880 PEG3Q9GZU2 1588 aa32.46■■■□□ 2.79
RBFOX3-209ENST00000582880 MROH2BQ7Z745 1585 aa32.39■■■□□ 2.78
RBFOX3-209ENST00000582880 BAZ1BQ9UIG0 1483 aaKnown RBP32.35■■■□□ 2.77
RBFOX3-209ENST00000582880 WIZO95785 1651 aa32.12■■■□□ 2.73
RBFOX3-209ENST00000582880 ERCC6Q03468 1493 aa32■■■□□ 2.71
RBFOX3-209ENST00000582880 NESP48681 1621 aa31.97■■■□□ 2.71
RBFOX3-209ENST00000582880 LAMC3Q9Y6N6 1575 aa31.93■■■□□ 2.7
RBFOX3-209ENST00000582880 CUX2O14529 1486 aa31.81■■■□□ 2.68
RBFOX3-209ENST00000582880 RSF1Q96T23 1441 aaPredicted RBP31.81■■■□□ 2.68
RBFOX3-209ENST00000582880 KIF21AQ7Z4S6 1674 aa31.8■■■□□ 2.68
RBFOX3-209ENST00000582880 TOP2AP11388 1531 aaKnown RBP31.74■■■□□ 2.67
RBFOX3-209ENST00000582880 THOC2Q8NI27 1593 aaKnown RBP31.73■■■□□ 2.67
RBFOX3-209ENST00000582880 PDS5BQ9NTI5 1447 aa31.58■■■□□ 2.65
RBFOX3-209ENST00000582880 CADPSQ9ULU8 1353 aa31.57■■■□□ 2.64
RBFOX3-209ENST00000582880 PRDM2Q13029 1718 aa31.49■■■□□ 2.63
RBFOX3-209ENST00000582880 CFTRP13569 1480 aa31.38■■■□□ 2.61
RBFOX3-209ENST00000582880 MRC2Q9UBG0 1479 aa31.36■■■□□ 2.61
RBFOX3-209ENST00000582880 CEP164Q9UPV0 1460 aa31.35■■■□□ 2.61
RBFOX3-209ENST00000582880 WDR62O43379 1518 aa31.33■■■□□ 2.61
RBFOX3-209ENST00000582880 FANCD2Q9BXW9 1451 aa31.31■■■□□ 2.6
RBFOX3-209ENST00000582880 CCDC88BA6NC98 1476 aa31.24■■■□□ 2.59
RBFOX3-209ENST00000582880 URB2Q14146 1524 aaKnown RBP31.03■■■□□ 2.56
RBFOX3-209ENST00000582880 DNAJC5Q9H3Z4 198 aa31.03■■■□□ 2.56
RBFOX3-209ENST00000582880 DNMBPQ6XZF7 1577 aa30.79■■■□□ 2.52
RBFOX3-209ENST00000582880 TOPBP1Q92547 1522 aa30.79■■■□□ 2.52
RBFOX3-209ENST00000582880 ABCC8Q09428 1581 aa30.73■■■□□ 2.51
RBFOX3-209ENST00000582880 IFT140Q96RY7 1462 aa30.66■■■□□ 2.5
RBFOX3-209ENST00000582880 SUPT5HO00267 1087 aaKnown RBP30.63■■■□□ 2.49
RBFOX3-209ENST00000582880 EIF4G3O43432 1585 aaKnown RBP30.58■■■□□ 2.49
RBFOX3-209ENST00000582880 TARBP1Q13395 1621 aaKnown RBP30.55■■■□□ 2.48
RBFOX3-209ENST00000582880 ZNF608Q9ULD9 1512 aaPredicted RBP30.55■■■□□ 2.48
RBFOX3-209ENST00000582880 POLA1P09884 1462 aaPredicted RBP30.5■■■□□ 2.47
RBFOX3-209ENST00000582880 CUX1P39880 1505 aa30.43■■■□□ 2.46
RBFOX3-209ENST00000582880 FGD5Q6ZNL6 1462 aa30.38■■■□□ 2.45
RBFOX3-209ENST00000582880 WDR97A6NE52 1622 aa30.36■■■□□ 2.45
RBFOX3-209ENST00000582880 CHD1O14646 1710 aa30.33■■■□□ 2.45
RBFOX3-209ENST00000582880 RAD54L2Q9Y4B4 1467 aa30.32■■■□□ 2.44
RBFOX3-209ENST00000582880 AQRO60306 1485 aaKnown RBP eCLIP30.27■■■□□ 2.44
RBFOX3-209ENST00000582880 SOGA1O94964 1423 aa30.26■■■□□ 2.43
RBFOX3-209ENST00000582880 OSCARQ8IYS5 282 aa30.21■■■□□ 2.43
RBFOX3-209ENST00000582880 PBRM1Q86U86 1689 aa30.2■■■□□ 2.43
RBFOX3-209ENST00000582880 BIVM-ERCC5R4GMW8 1640 aa30.2■■■□□ 2.43
RBFOX3-209ENST00000582880 TOP2BQ02880 1626 aa30.14■■■□□ 2.41
RBFOX3-209ENST00000582880 TDRD9Q8NDG6 1382 aaKnown RBP30.12■■■□□ 2.41
RBFOX3-209ENST00000582880 SYNJ1O43426 1573 aa30.11■■■□□ 2.41
RBFOX3-209ENST00000582880 ABCA5Q8WWZ7 1642 aa30.1■■■□□ 2.41
RBFOX3-209ENST00000582880 SNAPC4Q5SXM2 1469 aa30.08■■■□□ 2.41
RBFOX3-209ENST00000582880 RIMBP3CA6NJZ7 1639 aa30.06■■■□□ 2.4
RBFOX3-209ENST00000582880 RIMBP3BA6NNM3 1639 aa30.06■■■□□ 2.4
RBFOX3-209ENST00000582880 RIMBP3Q9UFD9 1639 aa30.06■■■□□ 2.4
RBFOX3-209ENST00000582880 ABCA10Q8WWZ4 1543 aa30.06■■■□□ 2.4
RBFOX3-209ENST00000582880 WRNQ14191 1432 aaPredicted RBP eCLIP30.05■■■□□ 2.4
RBFOX3-209ENST00000582880 GRIN2BQ13224 1484 aa30.03■■■□□ 2.4
RBFOX3-209ENST00000582880 MAGI1Q96QZ7 1491 aaPredicted RBP30.03■■■□□ 2.4
RBFOX3-209ENST00000582880 GAPVD1Q14C86 1478 aa29.98■■■□□ 2.39
RBFOX3-209ENST00000582880 ARHGEF11O15085 1522 aa29.95■■■□□ 2.38
RBFOX3-209ENST00000582880 TRIM41Q8WV44 630 aa29.92■■■□□ 2.38
RBFOX3-209ENST00000582880 FBLN2P98095 1184 aa29.91■■■□□ 2.38
RBFOX3-209ENST00000582880 SYNJ2O15056 1496 aa29.89■■■□□ 2.38
RBFOX3-209ENST00000582880 CLASP1Q7Z460 1538 aa29.86■■■□□ 2.37
RBFOX3-209ENST00000582880 ADAMTS12P58397 1594 aa29.84■■■□□ 2.37
RBFOX3-209ENST00000582880 CHMP7Q8WUX9 453 aaPredicted RBP29.76■■■□□ 2.35
RBFOX3-209ENST00000582880 ERICH3Q5RHP9 1530 aa29.73■■■□□ 2.35
RBFOX3-209ENST00000582880 GRIN2AQ12879 1464 aa29.68■■■□□ 2.34
RBFOX3-209ENST00000582880 ARAP1Q96P48 1450 aa29.67■■■□□ 2.34
RBFOX3-209ENST00000582880 CEP170Q5SW79 1584 aa29.61■■■□□ 2.33
RBFOX3-209ENST00000582880 FHAD1B1AJZ9 1412 aa29.6■■■□□ 2.33
RBFOX3-209ENST00000582880 NUP160Q12769 1436 aa29.53■■■□□ 2.32
RBFOX3-209ENST00000582880 CUL7Q14999 1698 aa29.5■■■□□ 2.31
RBFOX3-209ENST00000582880 CYB5RLQ6IPT4 315 aa29.48■■■□□ 2.31
RBFOX3-209ENST00000582880 SHROOM2Q13796 1616 aa29.48■■■□□ 2.31
RBFOX3-209ENST00000582880 KIF27Q86VH2 1401 aa29.43■■■□□ 2.3
RBFOX3-209ENST00000582880 RUSC2Q8N2Y8 1516 aa29.42■■■□□ 2.3
RBFOX3-209ENST00000582880 ERCC6L2Q5T890 1561 aa29.39■■■□□ 2.29
RBFOX3-209ENST00000582880 IGF1RP08069 1367 aa29.26■■■□□ 2.27
RBFOX3-209ENST00000582880 PRG4Q92954 1404 aaPredicted RBP29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms