RNA–Protein interactions for RNA: ENST00000582877.1

CACNB1-211, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 4

Gene CACNB1, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-211ENST00000582877 NISCHQ9Y2I1 1504 aa24.76■■□□□ 1.55
CACNB1-211ENST00000582877 CCDC180Q9P1Z9 1646 aa22.19■■□□□ 1.14
CACNB1-211ENST00000582877 ABCC9O60706 1549 aa21.89■■□□□ 1.09
CACNB1-211ENST00000582877 RB1CC1Q8TDY2 1594 aa20.95■□□□□ 0.94
CACNB1-211ENST00000582877 NACADO15069 1562 aa20.85■□□□□ 0.93
CACNB1-211ENST00000582877 DCAF8L2P0C7V8 631 aa20.69■□□□□ 0.9
CACNB1-211ENST00000582877 MYO15BQ96JP2 1530 aa20.61■□□□□ 0.89
CACNB1-211ENST00000582877 UNC13AQ9UPW8 1703 aa20.6■□□□□ 0.89
CACNB1-211ENST00000582877 ZCCHC6Q5VYS8 1495 aaKnown RBP20.6■□□□□ 0.89
CACNB1-211ENST00000582877 DCAF1Q9Y4B6 1507 aa20.45■□□□□ 0.86
CACNB1-211ENST00000582877 BICRAQ9NZM4 1560 aa20.36■□□□□ 0.85
CACNB1-211ENST00000582877 PABPN1Q86U42 306 aaKnown RBP eCLIP20.35■□□□□ 0.85
CACNB1-211ENST00000582877 SCRIBQ14160 1630 aa20.24■□□□□ 0.83
CACNB1-211ENST00000582877 DNAJC5BQ9UF47 199 aa20.23■□□□□ 0.83
CACNB1-211ENST00000582877 SHROOM4Q9ULL8 1493 aa20.05■□□□□ 0.8
CACNB1-211ENST00000582877 EIF4G1Q04637 1599 aaKnown RBP19.83■□□□□ 0.76
CACNB1-211ENST00000582877 CC2D2AQ9P2K1 1620 aa19.81■□□□□ 0.76
CACNB1-211ENST00000582877 CECR2Q9BXF3 1484 aa19.67■□□□□ 0.74
CACNB1-211ENST00000582877 SMARCA4P51532 1647 aa19.31■□□□□ 0.68
CACNB1-211ENST00000582877 BAZ1AQ9NRL2 1556 aaPredicted RBP19.21■□□□□ 0.67
CACNB1-211ENST00000582877 ATAD2BQ9ULI0 1458 aa19.21■□□□□ 0.67
CACNB1-211ENST00000582877 NCAPD3P42695 1498 aa19.19■□□□□ 0.66
CACNB1-211ENST00000582877 SMARCA2P51531 1590 aa19.18■□□□□ 0.66
CACNB1-211ENST00000582877 HMGXB3Q12766 1538 aa19.15■□□□□ 0.66
CACNB1-211ENST00000582877 MROH2BQ7Z745 1585 aa19.1■□□□□ 0.65
CACNB1-211ENST00000582877 PEG3Q9GZU2 1588 aa19.1■□□□□ 0.65
CACNB1-211ENST00000582877 BAZ1BQ9UIG0 1483 aaKnown RBP19.05■□□□□ 0.64
CACNB1-211ENST00000582877 WIZO95785 1651 aa18.92■□□□□ 0.62
CACNB1-211ENST00000582877 NESP48681 1621 aa18.89■□□□□ 0.61
CACNB1-211ENST00000582877 ERCC6Q03468 1493 aa18.87■□□□□ 0.61
CACNB1-211ENST00000582877 LAMC3Q9Y6N6 1575 aa18.79■□□□□ 0.6
CACNB1-211ENST00000582877 RSF1Q96T23 1441 aaPredicted RBP18.74■□□□□ 0.59
CACNB1-211ENST00000582877 CUX2O14529 1486 aa18.74■□□□□ 0.59
CACNB1-211ENST00000582877 KIF21AQ7Z4S6 1674 aa18.73■□□□□ 0.59
CACNB1-211ENST00000582877 THOC2Q8NI27 1593 aaKnown RBP18.71■□□□□ 0.59
CACNB1-211ENST00000582877 TOP2AP11388 1531 aaKnown RBP18.68■□□□□ 0.58
CACNB1-211ENST00000582877 CADPSQ9ULU8 1353 aa18.61■□□□□ 0.57
CACNB1-211ENST00000582877 PDS5BQ9NTI5 1447 aa18.6■□□□□ 0.57
CACNB1-211ENST00000582877 MRC2Q9UBG0 1479 aa18.49■□□□□ 0.55
CACNB1-211ENST00000582877 PRDM2Q13029 1718 aa18.49■□□□□ 0.55
CACNB1-211ENST00000582877 CFTRP13569 1480 aa18.48■□□□□ 0.55
CACNB1-211ENST00000582877 CEP164Q9UPV0 1460 aa18.46■□□□□ 0.55
CACNB1-211ENST00000582877 FANCD2Q9BXW9 1451 aa18.46■□□□□ 0.54
CACNB1-211ENST00000582877 WDR62O43379 1518 aa18.45■□□□□ 0.54
CACNB1-211ENST00000582877 CCDC88BA6NC98 1476 aa18.41■□□□□ 0.54
CACNB1-211ENST00000582877 DNAJC5Q9H3Z4 198 aa18.36■□□□□ 0.53
CACNB1-211ENST00000582877 URB2Q14146 1524 aaKnown RBP18.31■□□□□ 0.52
CACNB1-211ENST00000582877 TOPBP1Q92547 1522 aa18.14■□□□□ 0.49
CACNB1-211ENST00000582877 DNMBPQ6XZF7 1577 aa18.13■□□□□ 0.49
CACNB1-211ENST00000582877 ABCC8Q09428 1581 aa18.06■□□□□ 0.48
CACNB1-211ENST00000582877 SUPT5HO00267 1087 aaKnown RBP18.06■□□□□ 0.48
CACNB1-211ENST00000582877 IFT140Q96RY7 1462 aa18.06■□□□□ 0.48
CACNB1-211ENST00000582877 ZNF608Q9ULD9 1512 aaPredicted RBP18.03■□□□□ 0.48
CACNB1-211ENST00000582877 EIF4G3O43432 1585 aaKnown RBP18.02■□□□□ 0.48
CACNB1-211ENST00000582877 TARBP1Q13395 1621 aaKnown RBP18■□□□□ 0.47
CACNB1-211ENST00000582877 POLA1P09884 1462 aaPredicted RBP17.97■□□□□ 0.47
CACNB1-211ENST00000582877 CUX1P39880 1505 aa17.94■□□□□ 0.46
CACNB1-211ENST00000582877 FGD5Q6ZNL6 1462 aa17.91■□□□□ 0.46
CACNB1-211ENST00000582877 RAD54L2Q9Y4B4 1467 aa17.9■□□□□ 0.46
CACNB1-211ENST00000582877 AQRO60306 1485 aaKnown RBP eCLIP17.87■□□□□ 0.45
CACNB1-211ENST00000582877 CHD1O14646 1710 aa17.86■□□□□ 0.45
CACNB1-211ENST00000582877 WDR97A6NE52 1622 aa17.86■□□□□ 0.45
CACNB1-211ENST00000582877 SOGA1O94964 1423 aa17.84■□□□□ 0.45
CACNB1-211ENST00000582877 OSCARQ8IYS5 282 aa17.83■□□□□ 0.44
CACNB1-211ENST00000582877 TDRD9Q8NDG6 1382 aaKnown RBP17.79■□□□□ 0.44
CACNB1-211ENST00000582877 PBRM1Q86U86 1689 aa17.77■□□□□ 0.43
CACNB1-211ENST00000582877 BIVM-ERCC5R4GMW8 1640 aa17.76■□□□□ 0.43
CACNB1-211ENST00000582877 SNAPC4Q5SXM2 1469 aa17.75■□□□□ 0.43
CACNB1-211ENST00000582877 SYNJ1O43426 1573 aa17.74■□□□□ 0.43
CACNB1-211ENST00000582877 RIMBP3CA6NJZ7 1639 aa17.73■□□□□ 0.43
CACNB1-211ENST00000582877 RIMBP3BA6NNM3 1639 aa17.73■□□□□ 0.43
CACNB1-211ENST00000582877 RIMBP3Q9UFD9 1639 aa17.73■□□□□ 0.43
CACNB1-211ENST00000582877 TOP2BQ02880 1626 aa17.72■□□□□ 0.43
CACNB1-211ENST00000582877 ABCA5Q8WWZ7 1642 aa17.72■□□□□ 0.43
CACNB1-211ENST00000582877 TRIM41Q8WV44 630 aa17.71■□□□□ 0.43
CACNB1-211ENST00000582877 ABCA10Q8WWZ4 1543 aa17.7■□□□□ 0.42
CACNB1-211ENST00000582877 WRNQ14191 1432 aaPredicted RBP eCLIP17.69■□□□□ 0.42
CACNB1-211ENST00000582877 GRIN2BQ13224 1484 aa17.69■□□□□ 0.42
CACNB1-211ENST00000582877 MAGI1Q96QZ7 1491 aaPredicted RBP17.68■□□□□ 0.42
CACNB1-211ENST00000582877 ARHGEF11O15085 1522 aa17.67■□□□□ 0.42
CACNB1-211ENST00000582877 FBLN2P98095 1184 aa17.66■□□□□ 0.42
CACNB1-211ENST00000582877 GAPVD1Q14C86 1478 aa17.66■□□□□ 0.42
CACNB1-211ENST00000582877 SYNJ2O15056 1496 aa17.61■□□□□ 0.41
CACNB1-211ENST00000582877 CLASP1Q7Z460 1538 aa17.6■□□□□ 0.41
CACNB1-211ENST00000582877 ADAMTS12P58397 1594 aa17.57■□□□□ 0.4
CACNB1-211ENST00000582877 CHMP7Q8WUX9 453 aaPredicted RBP17.55■□□□□ 0.4
CACNB1-211ENST00000582877 ARAP1Q96P48 1450 aa17.51■□□□□ 0.39
CACNB1-211ENST00000582877 GRIN2AQ12879 1464 aa17.49■□□□□ 0.39
CACNB1-211ENST00000582877 ERICH3Q5RHP9 1530 aa17.48■□□□□ 0.39
CACNB1-211ENST00000582877 CEP170Q5SW79 1584 aa17.45■□□□□ 0.38
CACNB1-211ENST00000582877 FHAD1B1AJZ9 1412 aa17.43■□□□□ 0.38
CACNB1-211ENST00000582877 CYB5RLQ6IPT4 315 aa17.42■□□□□ 0.38
CACNB1-211ENST00000582877 NUP160Q12769 1436 aa17.4■□□□□ 0.38
CACNB1-211ENST00000582877 ERCC6L2Q5T890 1561 aa17.36■□□□□ 0.37
CACNB1-211ENST00000582877 SHROOM2Q13796 1616 aa17.36■□□□□ 0.37
CACNB1-211ENST00000582877 CUL7Q14999 1698 aa17.33■□□□□ 0.37
CACNB1-211ENST00000582877 RUSC2Q8N2Y8 1516 aa17.32■□□□□ 0.36
CACNB1-211ENST00000582877 KIF27Q86VH2 1401 aa17.31■□□□□ 0.36
CACNB1-211ENST00000582877 IGF1RP08069 1367 aa17.25■□□□□ 0.35
CACNB1-211ENST00000582877 PRG4Q92954 1404 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms