RNA–Protein interactions for RNA: ENST00000582853.5

PHF12-211, Transcript of PHD finger protein 12, humanhuman

TSL 4

Gene PHF12, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF12-211ENST00000582853 NISCHQ9Y2I1 1504 aa49.85■■■■■ 5.57
PHF12-211ENST00000582853 CCDC180Q9P1Z9 1646 aa44.64■■■■■ 4.74
PHF12-211ENST00000582853 ABCC9O60706 1549 aa44.11■■■■■ 4.65
PHF12-211ENST00000582853 RB1CC1Q8TDY2 1594 aa42.27■■■■■ 4.36
PHF12-211ENST00000582853 NACADO15069 1562 aa42.13■■■■■ 4.33
PHF12-211ENST00000582853 MYO15BQ96JP2 1530 aa41.79■■■■■ 4.28
PHF12-211ENST00000582853 DCAF8L2P0C7V8 631 aa41.62■■■■■ 4.25
PHF12-211ENST00000582853 ZCCHC6Q5VYS8 1495 aaKnown RBP41.4■■■■■ 4.22
PHF12-211ENST00000582853 DCAF1Q9Y4B6 1507 aa41.34■■■■■ 4.21
PHF12-211ENST00000582853 UNC13AQ9UPW8 1703 aa41.3■■■■■ 4.2
PHF12-211ENST00000582853 DNAJC5BQ9UF47 199 aa41.14■■■■■ 4.18
PHF12-211ENST00000582853 PABPN1Q86U42 306 aaKnown RBP eCLIP41.06■■■■■ 4.16
PHF12-211ENST00000582853 BICRAQ9NZM4 1560 aa41.04■■■■■ 4.16
PHF12-211ENST00000582853 SHROOM4Q9ULL8 1493 aa40.67■■■■■ 4.1
PHF12-211ENST00000582853 SCRIBQ14160 1630 aa40.49■■■■■ 4.07
PHF12-211ENST00000582853 EIF4G1Q04637 1599 aaKnown RBP39.98■■■■□ 3.99
PHF12-211ENST00000582853 CC2D2AQ9P2K1 1620 aa39.95■■■■□ 3.99
PHF12-211ENST00000582853 CECR2Q9BXF3 1484 aa39.76■■■■□ 3.96
PHF12-211ENST00000582853 NCAPD3P42695 1498 aa38.9■■■■□ 3.82
PHF12-211ENST00000582853 SMARCA4P51532 1647 aa38.78■■■■□ 3.8
PHF12-211ENST00000582853 ATAD2BQ9ULI0 1458 aa38.76■■■■□ 3.8
PHF12-211ENST00000582853 SMARCA2P51531 1590 aa38.69■■■■□ 3.78
PHF12-211ENST00000582853 BAZ1AQ9NRL2 1556 aaPredicted RBP38.67■■■■□ 3.78
PHF12-211ENST00000582853 HMGXB3Q12766 1538 aa38.63■■■■□ 3.77
PHF12-211ENST00000582853 PEG3Q9GZU2 1588 aa38.54■■■■□ 3.76
PHF12-211ENST00000582853 MROH2BQ7Z745 1585 aa38.35■■■■□ 3.73
PHF12-211ENST00000582853 BAZ1BQ9UIG0 1483 aaKnown RBP38.35■■■■□ 3.73
PHF12-211ENST00000582853 ERCC6Q03468 1493 aa38.06■■■■□ 3.68
PHF12-211ENST00000582853 CUX2O14529 1486 aa38.05■■■■□ 3.68
PHF12-211ENST00000582853 NESP48681 1621 aa38■■■■□ 3.67
PHF12-211ENST00000582853 LAMC3Q9Y6N6 1575 aa37.93■■■■□ 3.66
PHF12-211ENST00000582853 WIZO95785 1651 aa37.87■■■■□ 3.65
PHF12-211ENST00000582853 RSF1Q96T23 1441 aaPredicted RBP37.7■■■■□ 3.63
PHF12-211ENST00000582853 CADPSQ9ULU8 1353 aa37.68■■■■□ 3.62
PHF12-211ENST00000582853 PDS5BQ9NTI5 1447 aa37.67■■■■□ 3.62
PHF12-211ENST00000582853 THOC2Q8NI27 1593 aaKnown RBP37.65■■■■□ 3.62
PHF12-211ENST00000582853 DNAJC5Q9H3Z4 198 aa37.61■■■■□ 3.61
PHF12-211ENST00000582853 KIF21AQ7Z4S6 1674 aa37.56■■■■□ 3.6
PHF12-211ENST00000582853 TOP2AP11388 1531 aaKnown RBP37.48■■■■□ 3.59
PHF12-211ENST00000582853 CFTRP13569 1480 aa37.35■■■■□ 3.57
PHF12-211ENST00000582853 MRC2Q9UBG0 1479 aa37.29■■■■□ 3.56
PHF12-211ENST00000582853 WDR62O43379 1518 aa37.25■■■■□ 3.55
PHF12-211ENST00000582853 CEP164Q9UPV0 1460 aa37.2■■■■□ 3.54
PHF12-211ENST00000582853 FANCD2Q9BXW9 1451 aa37.19■■■■□ 3.54
PHF12-211ENST00000582853 CCDC88BA6NC98 1476 aa37.03■■■■□ 3.52
PHF12-211ENST00000582853 PRDM2Q13029 1718 aa36.99■■■■□ 3.51
PHF12-211ENST00000582853 URB2Q14146 1524 aaKnown RBP36.86■■■■□ 3.49
PHF12-211ENST00000582853 ABCC8Q09428 1581 aa36.57■■■■□ 3.45
PHF12-211ENST00000582853 TOPBP1Q92547 1522 aa36.54■■■■□ 3.44
PHF12-211ENST00000582853 IFT140Q96RY7 1462 aa36.49■■■■□ 3.43
PHF12-211ENST00000582853 DNMBPQ6XZF7 1577 aa36.45■■■■□ 3.43
PHF12-211ENST00000582853 ZNF608Q9ULD9 1512 aaPredicted RBP36.32■■■■□ 3.4
PHF12-211ENST00000582853 OSCARQ8IYS5 282 aa36.29■■■■□ 3.4
PHF12-211ENST00000582853 TARBP1Q13395 1621 aaKnown RBP36.23■■■■□ 3.39
PHF12-211ENST00000582853 POLA1P09884 1462 aaPredicted RBP36.19■■■■□ 3.38
PHF12-211ENST00000582853 EIF4G3O43432 1585 aaKnown RBP36.15■■■■□ 3.38
PHF12-211ENST00000582853 SUPT5HO00267 1087 aaKnown RBP36.04■■■■□ 3.36
PHF12-211ENST00000582853 AQRO60306 1485 aaKnown RBP eCLIP36.02■■■■□ 3.363e-6■■■■□ 24.1
PHF12-211ENST00000582853 CUX1P39880 1505 aa36.01■■■■□ 3.36
PHF12-211ENST00000582853 SOGA1O94964 1423 aa36■■■■□ 3.35
PHF12-211ENST00000582853 WDR97A6NE52 1622 aa35.98■■■■□ 3.35
PHF12-211ENST00000582853 FGD5Q6ZNL6 1462 aa35.98■■■■□ 3.35
PHF12-211ENST00000582853 RAD54L2Q9Y4B4 1467 aa35.98■■■■□ 3.35
PHF12-211ENST00000582853 TRIM41Q8WV44 630 aa35.85■■■■□ 3.33
PHF12-211ENST00000582853 TDRD9Q8NDG6 1382 aaKnown RBP35.84■■■■□ 3.33
PHF12-211ENST00000582853 CHD1O14646 1710 aa35.8■■■■□ 3.32
PHF12-211ENST00000582853 RIMBP3CA6NJZ7 1639 aa35.75■■■■□ 3.31
PHF12-211ENST00000582853 RIMBP3BA6NNM3 1639 aa35.75■■■■□ 3.31
PHF12-211ENST00000582853 RIMBP3Q9UFD9 1639 aa35.75■■■■□ 3.31
PHF12-211ENST00000582853 ARHGEF11O15085 1522 aa35.7■■■■□ 3.31
PHF12-211ENST00000582853 GRIN2BQ13224 1484 aa35.69■■■■□ 3.3
PHF12-211ENST00000582853 MAGI1Q96QZ7 1491 aaPredicted RBP35.69■■■■□ 3.3
PHF12-211ENST00000582853 ABCA10Q8WWZ4 1543 aa35.67■■■■□ 3.3
PHF12-211ENST00000582853 SNAPC4Q5SXM2 1469 aa35.67■■■■□ 3.3
PHF12-211ENST00000582853 FBLN2P98095 1184 aa35.59■■■■□ 3.29
PHF12-211ENST00000582853 GAPVD1Q14C86 1478 aa35.59■■■■□ 3.29
PHF12-211ENST00000582853 BIVM-ERCC5R4GMW8 1640 aa35.58■■■■□ 3.29
PHF12-211ENST00000582853 TOP2BQ02880 1626 aa35.57■■■■□ 3.28
PHF12-211ENST00000582853 ABCA5Q8WWZ7 1642 aa35.57■■■■□ 3.28
PHF12-211ENST00000582853 WRNQ14191 1432 aaPredicted RBP eCLIP35.55■■■■□ 3.28
PHF12-211ENST00000582853 SYNJ2O15056 1496 aa35.54■■■■□ 3.28
PHF12-211ENST00000582853 PBRM1Q86U86 1689 aa35.52■■■■□ 3.28
PHF12-211ENST00000582853 CLASP1Q7Z460 1538 aa35.5■■■■□ 3.27
PHF12-211ENST00000582853 CHMP7Q8WUX9 453 aaPredicted RBP35.49■■■■□ 3.27
PHF12-211ENST00000582853 SYNJ1O43426 1573 aa35.47■■■■□ 3.27
PHF12-211ENST00000582853 ARAP1Q96P48 1450 aa35.37■■■■□ 3.25
PHF12-211ENST00000582853 CYB5RLQ6IPT4 315 aa35.32■■■■□ 3.24
PHF12-211ENST00000582853 ERICH3Q5RHP9 1530 aa35.24■■■■□ 3.23
PHF12-211ENST00000582853 ADAMTS12P58397 1594 aa35.24■■■■□ 3.23
PHF12-211ENST00000582853 GRIN2AQ12879 1464 aa35.22■■■■□ 3.23
PHF12-211ENST00000582853 FHAD1B1AJZ9 1412 aa35.18■■■■□ 3.22
PHF12-211ENST00000582853 NUP160Q12769 1436 aa35.15■■■■□ 3.22
PHF12-211ENST00000582853 CEP170Q5SW79 1584 aa35.06■■■■□ 3.2
PHF12-211ENST00000582853 SHROOM2Q13796 1616 aa34.96■■■■□ 3.19
PHF12-211ENST00000582853 ERCC6L2Q5T890 1561 aa34.86■■■■□ 3.17
PHF12-211ENST00000582853 KIF27Q86VH2 1401 aa34.85■■■■□ 3.17
PHF12-211ENST00000582853 IGF1RP08069 1367 aa34.84■■■■□ 3.17
PHF12-211ENST00000582853 CUL7Q14999 1698 aa34.76■■■■□ 3.15
PHF12-211ENST00000582853 TRHP20396 242 aaPredicted RBP34.74■■■■□ 3.15
PHF12-211ENST00000582853 RUSC2Q8N2Y8 1516 aa34.74■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms