RNA–Protein interactions for RNA: ENST00000582833.5

NUP85-219, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-219ENST00000582833 NISCHQ9Y2I1 1504 aa22.79■■□□□ 1.24
NUP85-219ENST00000582833 ABCC9O60706 1549 aa20.48■□□□□ 0.87
NUP85-219ENST00000582833 CCDC180Q9P1Z9 1646 aa20.47■□□□□ 0.87
NUP85-219ENST00000582833 RB1CC1Q8TDY2 1594 aa19.5■□□□□ 0.71
NUP85-219ENST00000582833 DNAJC5BQ9UF47 199 aa19.41■□□□□ 0.7
NUP85-219ENST00000582833 NACADO15069 1562 aa19.32■□□□□ 0.68
NUP85-219ENST00000582833 DCAF8L2P0C7V8 631 aa19.25■□□□□ 0.67
NUP85-219ENST00000582833 UNC13AQ9UPW8 1703 aa19.23■□□□□ 0.67
NUP85-219ENST00000582833 PABPN1Q86U42 306 aaKnown RBP eCLIP19.13■□□□□ 0.65
NUP85-219ENST00000582833 MYO15BQ96JP2 1530 aa19.1■□□□□ 0.65
NUP85-219ENST00000582833 BICRAQ9NZM4 1560 aa18.94■□□□□ 0.62
NUP85-219ENST00000582833 ZCCHC6Q5VYS8 1495 aaKnown RBP18.86■□□□□ 0.61
NUP85-219ENST00000582833 DCAF1Q9Y4B6 1507 aa18.83■□□□□ 0.6
NUP85-219ENST00000582833 SHROOM4Q9ULL8 1493 aa18.7■□□□□ 0.58
NUP85-219ENST00000582833 CC2D2AQ9P2K1 1620 aa18.59■□□□□ 0.57
NUP85-219ENST00000582833 SCRIBQ14160 1630 aa18.56■□□□□ 0.56
NUP85-219ENST00000582833 CECR2Q9BXF3 1484 aa18.49■□□□□ 0.55
NUP85-219ENST00000582833 EIF4G1Q04637 1599 aaKnown RBP18.47■□□□□ 0.55
NUP85-219ENST00000582833 DNAJC5Q9H3Z4 198 aa17.98■□□□□ 0.47
NUP85-219ENST00000582833 NCAPD3P42695 1498 aa17.92■□□□□ 0.46
NUP85-219ENST00000582833 CUX2O14529 1486 aa17.84■□□□□ 0.45
NUP85-219ENST00000582833 ATAD2BQ9ULI0 1458 aa17.83■□□□□ 0.45
NUP85-219ENST00000582833 SMARCA4P51532 1647 aa17.73■□□□□ 0.43
NUP85-219ENST00000582833 ERCC6Q03468 1493 aa17.73■□□□□ 0.43
NUP85-219ENST00000582833 SMARCA2P51531 1590 aa17.7■□□□□ 0.42
NUP85-219ENST00000582833 HMGXB3Q12766 1538 aa17.69■□□□□ 0.42
NUP85-219ENST00000582833 BAZ1AQ9NRL2 1556 aaPredicted RBP17.65■□□□□ 0.42
NUP85-219ENST00000582833 PEG3Q9GZU2 1588 aa17.61■□□□□ 0.41
NUP85-219ENST00000582833 NESP48681 1621 aa17.61■□□□□ 0.41
NUP85-219ENST00000582833 BAZ1BQ9UIG0 1483 aaKnown RBP17.59■□□□□ 0.41
NUP85-219ENST00000582833 MROH2BQ7Z745 1585 aa17.57■□□□□ 0.4
NUP85-219ENST00000582833 THOC2Q8NI27 1593 aaKnown RBP17.55■□□□□ 0.4
NUP85-219ENST00000582833 LAMC3Q9Y6N6 1575 aa17.48■□□□□ 0.39
NUP85-219ENST00000582833 KIF21AQ7Z4S6 1674 aa17.48■□□□□ 0.39
NUP85-219ENST00000582833 CADPSQ9ULU8 1353 aa17.36■□□□□ 0.37
NUP85-219ENST00000582833 PDS5BQ9NTI5 1447 aa17.36■□□□□ 0.37
NUP85-219ENST00000582833 WIZO95785 1651 aa17.3■□□□□ 0.36
NUP85-219ENST00000582833 RSF1Q96T23 1441 aaPredicted RBP17.22■□□□□ 0.35
NUP85-219ENST00000582833 WDR62O43379 1518 aa17.2■□□□□ 0.34
NUP85-219ENST00000582833 MRC2Q9UBG0 1479 aa17.19■□□□□ 0.34
NUP85-219ENST00000582833 CFTRP13569 1480 aa17.14■□□□□ 0.33
NUP85-219ENST00000582833 FANCD2Q9BXW9 1451 aa17.12■□□□□ 0.33
NUP85-219ENST00000582833 CEP164Q9UPV0 1460 aa17.1■□□□□ 0.33
NUP85-219ENST00000582833 TOP2AP11388 1531 aaKnown RBP17.08■□□□□ 0.32
NUP85-219ENST00000582833 PRDM2Q13029 1718 aa17.05■□□□□ 0.32
NUP85-219ENST00000582833 TRIM41Q8WV44 630 aa17.05■□□□□ 0.32
NUP85-219ENST00000582833 URB2Q14146 1524 aaKnown RBP17■□□□□ 0.31
NUP85-219ENST00000582833 CCDC88BA6NC98 1476 aa16.96■□□□□ 0.31
NUP85-219ENST00000582833 POTEDQ86YR6 584 aa16.92■□□□□ 0.3
NUP85-219ENST00000582833 OSCARQ8IYS5 282 aa16.91■□□□□ 0.3
NUP85-219ENST00000582833 RIMBP3CA6NJZ7 1639 aa16.84■□□□□ 0.29
NUP85-219ENST00000582833 RIMBP3BA6NNM3 1639 aa16.84■□□□□ 0.29
NUP85-219ENST00000582833 RIMBP3Q9UFD9 1639 aa16.84■□□□□ 0.29
NUP85-219ENST00000582833 ZNF608Q9ULD9 1512 aaPredicted RBP16.8■□□□□ 0.28
NUP85-219ENST00000582833 TOPBP1Q92547 1522 aa16.79■□□□□ 0.28
NUP85-219ENST00000582833 IFT140Q96RY7 1462 aa16.79■□□□□ 0.28
NUP85-219ENST00000582833 ABCC8Q09428 1581 aa16.74■□□□□ 0.27
NUP85-219ENST00000582833 EIF4G3O43432 1585 aaKnown RBP16.71■□□□□ 0.27
NUP85-219ENST00000582833 CHD1O14646 1710 aa16.7■□□□□ 0.26
NUP85-219ENST00000582833 ARHGEF11O15085 1522 aa16.7■□□□□ 0.26
NUP85-219ENST00000582833 DNMBPQ6XZF7 1577 aa16.68■□□□□ 0.26
NUP85-219ENST00000582833 AQRO60306 1485 aaKnown RBP eCLIP16.65■□□□□ 0.26
NUP85-219ENST00000582833 TARBP1Q13395 1621 aaKnown RBP16.63■□□□□ 0.25
NUP85-219ENST00000582833 POLA1P09884 1462 aaPredicted RBP16.61■□□□□ 0.25
NUP85-219ENST00000582833 RAD54L2Q9Y4B4 1467 aa16.58■□□□□ 0.24
NUP85-219ENST00000582833 SOGA1O94964 1423 aa16.57■□□□□ 0.24
NUP85-219ENST00000582833 TDRD9Q8NDG6 1382 aaKnown RBP16.55■□□□□ 0.24
NUP85-219ENST00000582833 CYB5RLQ6IPT4 315 aa16.51■□□□□ 0.23
NUP85-219ENST00000582833 ARAP1Q96P48 1450 aa16.5■□□□□ 0.23
NUP85-219ENST00000582833 FBLN2P98095 1184 aa16.5■□□□□ 0.23
NUP85-219ENST00000582833 CUX1P39880 1505 aa16.5■□□□□ 0.23
NUP85-219ENST00000582833 FGD5Q6ZNL6 1462 aa16.49■□□□□ 0.23
NUP85-219ENST00000582833 WDR97A6NE52 1622 aa16.48■□□□□ 0.23
NUP85-219ENST00000582833 SNAPC4Q5SXM2 1469 aa16.42■□□□□ 0.22
NUP85-219ENST00000582833 CLASP1Q7Z460 1538 aa16.41■□□□□ 0.22
NUP85-219ENST00000582833 CHMP7Q8WUX9 453 aaPredicted RBP16.4■□□□□ 0.22
NUP85-219ENST00000582833 SUPT5HO00267 1087 aaKnown RBP16.39■□□□□ 0.21
NUP85-219ENST00000582833 GRIN2BQ13224 1484 aa16.39■□□□□ 0.21
NUP85-219ENST00000582833 MAGI1Q96QZ7 1491 aaPredicted RBP16.38■□□□□ 0.21
NUP85-219ENST00000582833 SYNJ1O43426 1573 aa16.38■□□□□ 0.21
NUP85-219ENST00000582833 PBRM1Q86U86 1689 aa16.37■□□□□ 0.21
NUP85-219ENST00000582833 SYNJ2O15056 1496 aa16.34■□□□□ 0.21
NUP85-219ENST00000582833 GAPVD1Q14C86 1478 aa16.34■□□□□ 0.21
NUP85-219ENST00000582833 TRHP20396 242 aaPredicted RBP16.33■□□□□ 0.2
NUP85-219ENST00000582833 ABCA10Q8WWZ4 1543 aa16.33■□□□□ 0.2
NUP85-219ENST00000582833 ABCA5Q8WWZ7 1642 aa16.26■□□□□ 0.19
NUP85-219ENST00000582833 WRNQ14191 1432 aaPredicted RBP eCLIP16.25■□□□□ 0.19
NUP85-219ENST00000582833 GRIN2AQ12879 1464 aa16.18■□□□□ 0.18
NUP85-219ENST00000582833 TOP2BQ02880 1626 aa16.18■□□□□ 0.18
NUP85-219ENST00000582833 NUP160Q12769 1436 aa16.17■□□□□ 0.18
NUP85-219ENST00000582833 BIVM-ERCC5R4GMW8 1640 aa16.16■□□□□ 0.18
NUP85-219ENST00000582833 FHAD1B1AJZ9 1412 aa16.14■□□□□ 0.17
NUP85-219ENST00000582833 ADAMTS12P58397 1594 aa16.13■□□□□ 0.17
NUP85-219ENST00000582833 ERCC6L2Q5T890 1561 aa16.13■□□□□ 0.17
NUP85-219ENST00000582833 CEP170Q5SW79 1584 aa16.11■□□□□ 0.17
NUP85-219ENST00000582833 KIF13AQ9H1H9 1805 aa16.1■□□□□ 0.17
NUP85-219ENST00000582833 ERICH3Q5RHP9 1530 aa16.09■□□□□ 0.17
NUP85-219ENST00000582833 SHROOM2Q13796 1616 aa16.08■□□□□ 0.17
NUP85-219ENST00000582833 AEBP2Q6ZN18 517 aaPredicted RBP16.08■□□□□ 0.16
NUP85-219ENST00000582833 JPH4Q96JJ6 628 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms