RNA–Protein interactions for RNA: ENST00000582798.1

CSF3-208, Transcript of colony stimulating factor 3, humanhuman

TSL 4

Gene CSF3, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3-208ENST00000582798 NISCHQ9Y2I1 1504 aa29.35■■■□□ 2.29
CSF3-208ENST00000582798 ABCC9O60706 1549 aa26.64■■□□□ 1.85
CSF3-208ENST00000582798 CCDC180Q9P1Z9 1646 aa26.26■■□□□ 1.79
CSF3-208ENST00000582798 DNAJC5BQ9UF47 199 aa25.37■■□□□ 1.65
CSF3-208ENST00000582798 RB1CC1Q8TDY2 1594 aa25.13■■□□□ 1.61
CSF3-208ENST00000582798 NACADO15069 1562 aa24.93■■□□□ 1.58
CSF3-208ENST00000582798 DCAF8L2P0C7V8 631 aa24.9■■□□□ 1.58
CSF3-208ENST00000582798 PABPN1Q86U42 306 aaKnown RBP eCLIP24.86■■□□□ 1.57
CSF3-208ENST00000582798 UNC13AQ9UPW8 1703 aa24.61■■□□□ 1.53
CSF3-208ENST00000582798 BICRAQ9NZM4 1560 aa24.56■■□□□ 1.52
CSF3-208ENST00000582798 MYO15BQ96JP2 1530 aa24.53■■□□□ 1.52
CSF3-208ENST00000582798 ZCCHC6Q5VYS8 1495 aaKnown RBP24.26■■□□□ 1.47
CSF3-208ENST00000582798 DCAF1Q9Y4B6 1507 aa24.15■■□□□ 1.46
CSF3-208ENST00000582798 SCRIBQ14160 1630 aa24.03■■□□□ 1.44
CSF3-208ENST00000582798 SHROOM4Q9ULL8 1493 aa24■■□□□ 1.43
CSF3-208ENST00000582798 CC2D2AQ9P2K1 1620 aa24■■□□□ 1.43
CSF3-208ENST00000582798 CECR2Q9BXF3 1484 aa23.99■■□□□ 1.43
CSF3-208ENST00000582798 EIF4G1Q04637 1599 aaKnown RBP23.9■■□□□ 1.42
CSF3-208ENST00000582798 DNAJC5Q9H3Z4 198 aa23.29■■□□□ 1.32
CSF3-208ENST00000582798 NCAPD3P42695 1498 aa23.11■■□□□ 1.29
CSF3-208ENST00000582798 ATAD2BQ9ULI0 1458 aa23.03■■□□□ 1.28
CSF3-208ENST00000582798 CUX2O14529 1486 aa22.92■■□□□ 1.26
CSF3-208ENST00000582798 ERCC6Q03468 1493 aa22.9■■□□□ 1.26
CSF3-208ENST00000582798 SMARCA4P51532 1647 aa22.89■■□□□ 1.25
CSF3-208ENST00000582798 NESP48681 1621 aa22.88■■□□□ 1.25
CSF3-208ENST00000582798 HMGXB3Q12766 1538 aa22.83■■□□□ 1.25
CSF3-208ENST00000582798 SMARCA2P51531 1590 aa22.83■■□□□ 1.25
CSF3-208ENST00000582798 BAZ1BQ9UIG0 1483 aaKnown RBP22.71■■□□□ 1.23
CSF3-208ENST00000582798 BAZ1AQ9NRL2 1556 aaPredicted RBP22.71■■□□□ 1.23
CSF3-208ENST00000582798 MROH2BQ7Z745 1585 aa22.67■■□□□ 1.22
CSF3-208ENST00000582798 PEG3Q9GZU2 1588 aa22.67■■□□□ 1.22
CSF3-208ENST00000582798 THOC2Q8NI27 1593 aaKnown RBP22.58■■□□□ 1.2
CSF3-208ENST00000582798 LAMC3Q9Y6N6 1575 aa22.51■■□□□ 1.19
CSF3-208ENST00000582798 KIF21AQ7Z4S6 1674 aa22.45■■□□□ 1.18
CSF3-208ENST00000582798 PDS5BQ9NTI5 1447 aa22.42■■□□□ 1.18
CSF3-208ENST00000582798 CADPSQ9ULU8 1353 aa22.4■■□□□ 1.18
CSF3-208ENST00000582798 WIZO95785 1651 aa22.33■■□□□ 1.17
CSF3-208ENST00000582798 MRC2Q9UBG0 1479 aa22.26■■□□□ 1.15
CSF3-208ENST00000582798 WDR62O43379 1518 aa22.21■■□□□ 1.15
CSF3-208ENST00000582798 TRIM41Q8WV44 630 aa22.15■■□□□ 1.14
CSF3-208ENST00000582798 RSF1Q96T23 1441 aaPredicted RBP22.13■■□□□ 1.13
CSF3-208ENST00000582798 FANCD2Q9BXW9 1451 aa22.12■■□□□ 1.13
CSF3-208ENST00000582798 CEP164Q9UPV0 1460 aa22.1■■□□□ 1.13
CSF3-208ENST00000582798 CFTRP13569 1480 aa22.09■■□□□ 1.13
CSF3-208ENST00000582798 URB2Q14146 1524 aaKnown RBP22.01■■□□□ 1.11
CSF3-208ENST00000582798 TOP2AP11388 1531 aaKnown RBP21.99■■□□□ 1.11
CSF3-208ENST00000582798 OSCARQ8IYS5 282 aa21.93■■□□□ 1.1
CSF3-208ENST00000582798 CCDC88BA6NC98 1476 aa21.83■■□□□ 1.09
CSF3-208ENST00000582798 ZNF608Q9ULD9 1512 aaPredicted RBP21.8■■□□□ 1.08
CSF3-208ENST00000582798 IFT140Q96RY7 1462 aa21.7■■□□□ 1.06
CSF3-208ENST00000582798 TOPBP1Q92547 1522 aa21.7■■□□□ 1.06
CSF3-208ENST00000582798 PRDM2Q13029 1718 aa21.67■■□□□ 1.06
CSF3-208ENST00000582798 RIMBP3CA6NJZ7 1639 aa21.64■■□□□ 1.05
CSF3-208ENST00000582798 RIMBP3BA6NNM3 1639 aa21.64■■□□□ 1.05
CSF3-208ENST00000582798 RIMBP3Q9UFD9 1639 aa21.64■■□□□ 1.05
CSF3-208ENST00000582798 AQRO60306 1485 aaKnown RBP eCLIP21.58■■□□□ 1.04
CSF3-208ENST00000582798 ARHGEF11O15085 1522 aa21.56■■□□□ 1.04
CSF3-208ENST00000582798 EIF4G3O43432 1585 aaKnown RBP21.53■■□□□ 1.04
CSF3-208ENST00000582798 DNMBPQ6XZF7 1577 aa21.53■■□□□ 1.04
CSF3-208ENST00000582798 ABCC8Q09428 1581 aa21.52■■□□□ 1.04
CSF3-208ENST00000582798 TARBP1Q13395 1621 aaKnown RBP21.51■■□□□ 1.03
CSF3-208ENST00000582798 CYB5RLQ6IPT4 315 aa21.48■■□□□ 1.03
CSF3-208ENST00000582798 POLA1P09884 1462 aaPredicted RBP21.46■■□□□ 1.03
CSF3-208ENST00000582798 RAD54L2Q9Y4B4 1467 aa21.46■■□□□ 1.03
CSF3-208ENST00000582798 TDRD9Q8NDG6 1382 aaKnown RBP21.41■■□□□ 1.02
CSF3-208ENST00000582798 FBLN2P98095 1184 aa21.41■■□□□ 1.02
CSF3-208ENST00000582798 CHD1O14646 1710 aa21.4■■□□□ 1.02
CSF3-208ENST00000582798 ARAP1Q96P48 1450 aa21.38■■□□□ 1.01
CSF3-208ENST00000582798 SOGA1O94964 1423 aa21.37■■□□□ 1.01
CSF3-208ENST00000582798 FGD5Q6ZNL6 1462 aa21.3■■□□□ 1
CSF3-208ENST00000582798 CUX1P39880 1505 aa21.28■■□□□ 1
CSF3-208ENST00000582798 SNAPC4Q5SXM2 1469 aa21.27■■□□□ 1
CSF3-208ENST00000582798 TRHP20396 242 aaPredicted RBP21.24■□□□□ 0.99
CSF3-208ENST00000582798 CLASP1Q7Z460 1538 aa21.21■□□□□ 0.99
CSF3-208ENST00000582798 CHMP7Q8WUX9 453 aaPredicted RBP21.2■□□□□ 0.98
CSF3-208ENST00000582798 GRIN2BQ13224 1484 aa21.16■□□□□ 0.98
CSF3-208ENST00000582798 MAGI1Q96QZ7 1491 aaPredicted RBP21.15■□□□□ 0.98
CSF3-208ENST00000582798 WDR97A6NE52 1622 aa21.12■□□□□ 0.97
CSF3-208ENST00000582798 SYNJ2O15056 1496 aa21.11■□□□□ 0.97
CSF3-208ENST00000582798 SYNJ1O43426 1573 aa21.09■□□□□ 0.97
CSF3-208ENST00000582798 GAPVD1Q14C86 1478 aa21.07■□□□□ 0.96
CSF3-208ENST00000582798 ABCA10Q8WWZ4 1543 aa21.04■□□□□ 0.96
CSF3-208ENST00000582798 SUPT5HO00267 1087 aaKnown RBP21.02■□□□□ 0.96
CSF3-208ENST00000582798 PBRM1Q86U86 1689 aa20.99■□□□□ 0.95
CSF3-208ENST00000582798 ABCA5Q8WWZ7 1642 aa20.99■□□□□ 0.95
CSF3-208ENST00000582798 ERCC6L2Q5T890 1561 aa20.97■□□□□ 0.95
CSF3-208ENST00000582798 GRIN2AQ12879 1464 aa20.9■□□□□ 0.94
CSF3-208ENST00000582798 WRNQ14191 1432 aaPredicted RBP eCLIP20.88■□□□□ 0.93
CSF3-208ENST00000582798 CEP170Q5SW79 1584 aa20.87■□□□□ 0.93
CSF3-208ENST00000582798 NUP160Q12769 1436 aa20.87■□□□□ 0.93
CSF3-208ENST00000582798 ADAMTS12P58397 1594 aa20.84■□□□□ 0.93
CSF3-208ENST00000582798 TOP2BQ02880 1626 aa20.81■□□□□ 0.92
CSF3-208ENST00000582798 FHAD1B1AJZ9 1412 aa20.79■□□□□ 0.92
CSF3-208ENST00000582798 BIVM-ERCC5R4GMW8 1640 aa20.78■□□□□ 0.92
CSF3-208ENST00000582798 SHROOM2Q13796 1616 aa20.75■□□□□ 0.91
CSF3-208ENST00000582798 ERICH3Q5RHP9 1530 aa20.71■□□□□ 0.91
CSF3-208ENST00000582798 AEBP2Q6ZN18 517 aaPredicted RBP20.69■□□□□ 0.9
CSF3-208ENST00000582798 JPH4Q96JJ6 628 aa20.69■□□□□ 0.9
CSF3-208ENST00000582798 PRG4Q92954 1404 aaPredicted RBP20.69■□□□□ 0.9
CSF3-208ENST00000582798 KIF13AQ9H1H9 1805 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms