RNA–Protein interactions for RNA: ENST00000582797.5

IFT20-212, Transcript of intraflagellar transport 20, humanhuman

TSL 2

Gene IFT20, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-212ENST00000582797 NISCHQ9Y2I1 1504 aa38.99■■■■□ 3.83
IFT20-212ENST00000582797 ABCC9O60706 1549 aa35.95■■■■□ 3.35
IFT20-212ENST00000582797 CCDC180Q9P1Z9 1646 aa35.33■■■■□ 3.25
IFT20-212ENST00000582797 DNAJC5BQ9UF47 199 aa34.28■■■■□ 3.08
IFT20-212ENST00000582797 RB1CC1Q8TDY2 1594 aa33.9■■■■□ 3.02
IFT20-212ENST00000582797 NACADO15069 1562 aa33.47■■■□□ 2.95
IFT20-212ENST00000582797 PABPN1Q86U42 306 aaKnown RBP eCLIP33.32■■■□□ 2.92
IFT20-212ENST00000582797 UNC13AQ9UPW8 1703 aa33.31■■■□□ 2.92
IFT20-212ENST00000582797 DCAF8L2P0C7V8 631 aa33.14■■■□□ 2.9
IFT20-212ENST00000582797 BICRAQ9NZM4 1560 aa33■■■□□ 2.87
IFT20-212ENST00000582797 MYO15BQ96JP2 1530 aa32.75■■■□□ 2.83
IFT20-212ENST00000582797 CC2D2AQ9P2K1 1620 aa32.46■■■□□ 2.79
IFT20-212ENST00000582797 CECR2Q9BXF3 1484 aa32.42■■■□□ 2.78
IFT20-212ENST00000582797 SHROOM4Q9ULL8 1493 aa32.35■■■□□ 2.77
IFT20-212ENST00000582797 EIF4G1Q04637 1599 aaKnown RBP32.21■■■□□ 2.75
IFT20-212ENST00000582797 SCRIBQ14160 1630 aa32.18■■■□□ 2.74
IFT20-212ENST00000582797 ZCCHC6Q5VYS8 1495 aaKnown RBP32.17■■■□□ 2.74
IFT20-212ENST00000582797 DCAF1Q9Y4B6 1507 aa32.11■■■□□ 2.73
IFT20-212ENST00000582797 DNAJC5Q9H3Z4 198 aa31.89■■■□□ 2.7
IFT20-212ENST00000582797 CUX2O14529 1486 aa31.18■■■□□ 2.58
IFT20-212ENST00000582797 ERCC6Q03468 1493 aa31.04■■■□□ 2.56
IFT20-212ENST00000582797 NCAPD3P42695 1498 aa30.89■■■□□ 2.53
IFT20-212ENST00000582797 ATAD2BQ9ULI0 1458 aa30.73■■■□□ 2.51
IFT20-212ENST00000582797 NESP48681 1621 aa30.72■■■□□ 2.51
IFT20-212ENST00000582797 HMGXB3Q12766 1538 aa30.64■■■□□ 2.5
IFT20-212ENST00000582797 SMARCA2P51531 1590 aa30.61■■■□□ 2.49
IFT20-212ENST00000582797 SMARCA4P51532 1647 aa30.61■■■□□ 2.49
IFT20-212ENST00000582797 THOC2Q8NI27 1593 aaKnown RBP30.57■■■□□ 2.48
IFT20-212ENST00000582797 BAZ1BQ9UIG0 1483 aaKnown RBP30.41■■■□□ 2.46
IFT20-212ENST00000582797 KIF21AQ7Z4S6 1674 aa30.39■■■□□ 2.45
IFT20-212ENST00000582797 LAMC3Q9Y6N6 1575 aa30.35■■■□□ 2.45
IFT20-212ENST00000582797 BAZ1AQ9NRL2 1556 aaPredicted RBP30.3■■■□□ 2.44
IFT20-212ENST00000582797 TRIM41Q8WV44 630 aa30.28■■■□□ 2.44
IFT20-212ENST00000582797 PEG3Q9GZU2 1588 aa30.27■■■□□ 2.44
IFT20-212ENST00000582797 PDS5BQ9NTI5 1447 aa30.13■■■□□ 2.41
IFT20-212ENST00000582797 MROH2BQ7Z745 1585 aa30.07■■■□□ 2.4
IFT20-212ENST00000582797 MRC2Q9UBG0 1479 aa29.96■■■□□ 2.39
IFT20-212ENST00000582797 WDR62O43379 1518 aa29.94■■■□□ 2.38
IFT20-212ENST00000582797 CADPSQ9ULU8 1353 aa29.9■■■□□ 2.38
IFT20-212ENST00000582797 WIZO95785 1651 aa29.74■■■□□ 2.35
IFT20-212ENST00000582797 CEP164Q9UPV0 1460 aa29.71■■■□□ 2.35
IFT20-212ENST00000582797 FANCD2Q9BXW9 1451 aa29.61■■■□□ 2.33
IFT20-212ENST00000582797 OSCARQ8IYS5 282 aa29.59■■■□□ 2.33
IFT20-212ENST00000582797 URB2Q14146 1524 aaKnown RBP29.46■■■□□ 2.31
IFT20-212ENST00000582797 CFTRP13569 1480 aa29.46■■■□□ 2.31
IFT20-212ENST00000582797 RIMBP3CA6NJZ7 1639 aa29.45■■■□□ 2.31
IFT20-212ENST00000582797 RIMBP3BA6NNM3 1639 aa29.45■■■□□ 2.31
IFT20-212ENST00000582797 RIMBP3Q9UFD9 1639 aa29.45■■■□□ 2.31
IFT20-212ENST00000582797 PRDM2Q13029 1718 aa29.28■■■□□ 2.28
IFT20-212ENST00000582797 ARHGEF11O15085 1522 aa29.24■■■□□ 2.27
IFT20-212ENST00000582797 TOP2AP11388 1531 aaKnown RBP29.24■■■□□ 2.27
IFT20-212ENST00000582797 ZNF608Q9ULD9 1512 aaPredicted RBP29.21■■■□□ 2.27
IFT20-212ENST00000582797 RSF1Q96T23 1441 aaPredicted RBP29.15■■■□□ 2.26
IFT20-212ENST00000582797 IFT140Q96RY7 1462 aa29.11■■■□□ 2.25
IFT20-212ENST00000582797 EIF4G3O43432 1585 aaKnown RBP29.06■■■□□ 2.24
IFT20-212ENST00000582797 CHD1O14646 1710 aa29.02■■■□□ 2.24
IFT20-212ENST00000582797 TOPBP1Q92547 1522 aa29■■■□□ 2.23
IFT20-212ENST00000582797 CYB5RLQ6IPT4 315 aa28.99■■■□□ 2.23
IFT20-212ENST00000582797 ARAP1Q96P48 1450 aa28.91■■■□□ 2.22
IFT20-212ENST00000582797 CCDC88BA6NC98 1476 aa28.9■■■□□ 2.22
IFT20-212ENST00000582797 TRHP20396 242 aaPredicted RBP28.89■■■□□ 2.22
IFT20-212ENST00000582797 DNMBPQ6XZF7 1577 aa28.85■■■□□ 2.21
IFT20-212ENST00000582797 TARBP1Q13395 1621 aaKnown RBP28.85■■■□□ 2.21
IFT20-212ENST00000582797 AQRO60306 1485 aaKnown RBP eCLIP28.83■■■□□ 2.21
IFT20-212ENST00000582797 ABCC8Q09428 1581 aa28.81■■■□□ 2.2
IFT20-212ENST00000582797 FBLN2P98095 1184 aa28.73■■■□□ 2.19
IFT20-212ENST00000582797 POLA1P09884 1462 aaPredicted RBP28.66■■■□□ 2.18
IFT20-212ENST00000582797 RAD54L2Q9Y4B4 1467 aa28.59■■■□□ 2.17
IFT20-212ENST00000582797 CLASP1Q7Z460 1538 aa28.59■■■□□ 2.17
IFT20-212ENST00000582797 TDRD9Q8NDG6 1382 aaKnown RBP28.53■■■□□ 2.16
IFT20-212ENST00000582797 SNAPC4Q5SXM2 1469 aa28.53■■■□□ 2.16
IFT20-212ENST00000582797 AEBP2Q6ZN18 517 aaPredicted RBP28.5■■■□□ 2.15
IFT20-212ENST00000582797 SYNJ1O43426 1573 aa28.47■■■□□ 2.15
IFT20-212ENST00000582797 SOGA1O94964 1423 aa28.47■■■□□ 2.15
IFT20-212ENST00000582797 WDR97A6NE52 1622 aa28.43■■■□□ 2.14
IFT20-212ENST00000582797 FGD5Q6ZNL6 1462 aa28.4■■■□□ 2.14
IFT20-212ENST00000582797 CHMP7Q8WUX9 453 aaPredicted RBP28.38■■■□□ 2.13
IFT20-212ENST00000582797 MAGI1Q96QZ7 1491 aaPredicted RBP28.38■■■□□ 2.13
IFT20-212ENST00000582797 SYNJ2O15056 1496 aa28.31■■■□□ 2.12
IFT20-212ENST00000582797 GRIN2BQ13224 1484 aa28.31■■■□□ 2.12
IFT20-212ENST00000582797 PBRM1Q86U86 1689 aa28.31■■■□□ 2.12
IFT20-212ENST00000582797 CUX1P39880 1505 aa28.29■■■□□ 2.12
IFT20-212ENST00000582797 GAPVD1Q14C86 1478 aa28.27■■■□□ 2.12
IFT20-212ENST00000582797 ERCC6L2Q5T890 1561 aa28.14■■■□□ 2.1
IFT20-212ENST00000582797 ABCA5Q8WWZ7 1642 aa28.1■■■□□ 2.09
IFT20-212ENST00000582797 ABCA10Q8WWZ4 1543 aa28■■■□□ 2.07
IFT20-212ENST00000582797 KIF13AQ9H1H9 1805 aa27.99■■■□□ 2.07
IFT20-212ENST00000582797 CEP170Q5SW79 1584 aa27.99■■■□□ 2.07
IFT20-212ENST00000582797 GRIN2AQ12879 1464 aa27.98■■■□□ 2.07
IFT20-212ENST00000582797 ADAMTS12P58397 1594 aa27.93■■■□□ 2.06
IFT20-212ENST00000582797 SHROOM2Q13796 1616 aa27.92■■■□□ 2.06
IFT20-212ENST00000582797 NUP160Q12769 1436 aa27.89■■■□□ 2.06
IFT20-212ENST00000582797 FHAD1B1AJZ9 1412 aa27.72■■■□□ 2.03
IFT20-212ENST00000582797 WRNQ14191 1432 aaPredicted RBP eCLIP27.72■■■□□ 2.03
IFT20-212ENST00000582797 BIVM-ERCC5R4GMW8 1640 aa27.7■■■□□ 2.02
IFT20-212ENST00000582797 PRG4Q92954 1404 aaPredicted RBP27.67■■■□□ 2.02
IFT20-212ENST00000582797 TOP2BQ02880 1626 aa27.66■■■□□ 2.02
IFT20-212ENST00000582797 ERICH3Q5RHP9 1530 aa27.64■■■□□ 2.02
IFT20-212ENST00000582797 ABCC10Q5T3U5 1492 aa27.6■■■□□ 2.01
IFT20-212ENST00000582797 DIP2BQ9P265 1576 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms