RNA–Protein interactions for RNA: ENST00000582681.1

NUP85-218, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-218ENST00000582681 NISCHQ9Y2I1 1504 aa19.13■□□□□ 0.65
NUP85-218ENST00000582681 CCDC180Q9P1Z9 1646 aa17.05■□□□□ 0.32
NUP85-218ENST00000582681 ABCC9O60706 1549 aa16.41■□□□□ 0.22
NUP85-218ENST00000582681 MYO15BQ96JP2 1530 aa16.03■□□□□ 0.16
NUP85-218ENST00000582681 ZCCHC6Q5VYS8 1495 aaKnown RBP15.98■□□□□ 0.15
NUP85-218ENST00000582681 NACADO15069 1562 aa15.98■□□□□ 0.15
NUP85-218ENST00000582681 DCAF1Q9Y4B6 1507 aa15.95■□□□□ 0.14
NUP85-218ENST00000582681 RB1CC1Q8TDY2 1594 aa15.94■□□□□ 0.14
NUP85-218ENST00000582681 DCAF8L2P0C7V8 631 aa15.61■□□□□ 0.09
NUP85-218ENST00000582681 UNC13AQ9UPW8 1703 aa15.58■□□□□ 0.08
NUP85-218ENST00000582681 BICRAQ9NZM4 1560 aa15.49■□□□□ 0.07
NUP85-218ENST00000582681 SHROOM4Q9ULL8 1493 aa15.45■□□□□ 0.06
NUP85-218ENST00000582681 SCRIBQ14160 1630 aa15.39■□□□□ 0.05
NUP85-218ENST00000582681 PABPN1Q86U42 306 aaKnown RBP eCLIP15.28■□□□□ 0.04
NUP85-218ENST00000582681 EIF4G1Q04637 1599 aaKnown RBP15.03■□□□□ -0
NUP85-218ENST00000582681 DNAJC5BQ9UF47 199 aa15.02■□□□□ -0
NUP85-218ENST00000582681 CC2D2AQ9P2K1 1620 aa14.93□□□□□ -0.02
NUP85-218ENST00000582681 CECR2Q9BXF3 1484 aa14.84□□□□□ -0.03
NUP85-218ENST00000582681 BAZ1AQ9NRL2 1556 aaPredicted RBP14.82□□□□□ -0.04
NUP85-218ENST00000582681 SMARCA4P51532 1647 aa14.82□□□□□ -0.04
NUP85-218ENST00000582681 PEG3Q9GZU2 1588 aa14.78□□□□□ -0.04
NUP85-218ENST00000582681 NCAPD3P42695 1498 aa14.75□□□□□ -0.05
NUP85-218ENST00000582681 SMARCA2P51531 1590 aa14.73□□□□□ -0.05
NUP85-218ENST00000582681 ATAD2BQ9ULI0 1458 aa14.72□□□□□ -0.05
NUP85-218ENST00000582681 MROH2BQ7Z745 1585 aa14.71□□□□□ -0.05
NUP85-218ENST00000582681 HMGXB3Q12766 1538 aa14.71□□□□□ -0.06
NUP85-218ENST00000582681 RSF1Q96T23 1441 aaPredicted RBP14.58□□□□□ -0.08
NUP85-218ENST00000582681 BAZ1BQ9UIG0 1483 aaKnown RBP14.56□□□□□ -0.08
NUP85-218ENST00000582681 WIZO95785 1651 aa14.52□□□□□ -0.09
NUP85-218ENST00000582681 TOP2AP11388 1531 aaKnown RBP14.44□□□□□ -0.1
NUP85-218ENST00000582681 LAMC3Q9Y6N6 1575 aa14.33□□□□□ -0.12
NUP85-218ENST00000582681 CADPSQ9ULU8 1353 aa14.26□□□□□ -0.13
NUP85-218ENST00000582681 NESP48681 1621 aa14.25□□□□□ -0.13
NUP85-218ENST00000582681 CFTRP13569 1480 aa14.24□□□□□ -0.13
NUP85-218ENST00000582681 CCDC88BA6NC98 1476 aa14.22□□□□□ -0.13
NUP85-218ENST00000582681 PDS5BQ9NTI5 1447 aa14.17□□□□□ -0.14
NUP85-218ENST00000582681 PRDM2Q13029 1718 aa14.15□□□□□ -0.14
NUP85-218ENST00000582681 THOC2Q8NI27 1593 aaKnown RBP14.13□□□□□ -0.15
NUP85-218ENST00000582681 ERCC6Q03468 1493 aa14.12□□□□□ -0.15
NUP85-218ENST00000582681 KIF21AQ7Z4S6 1674 aa14.12□□□□□ -0.15
NUP85-218ENST00000582681 CUX2O14529 1486 aa14.1□□□□□ -0.15
NUP85-218ENST00000582681 FANCD2Q9BXW9 1451 aa14.08□□□□□ -0.16
NUP85-218ENST00000582681 CEP164Q9UPV0 1460 aa14.06□□□□□ -0.16
NUP85-218ENST00000582681 WDR62O43379 1518 aa14.05□□□□□ -0.16
NUP85-218ENST00000582681 MRC2Q9UBG0 1479 aa14.04□□□□□ -0.16
NUP85-218ENST00000582681 SUPT5HO00267 1087 aaKnown RBP14.01□□□□□ -0.17
NUP85-218ENST00000582681 URB2Q14146 1524 aaKnown RBP13.95□□□□□ -0.18
NUP85-218ENST00000582681 ABCC8Q09428 1581 aa13.91□□□□□ -0.18
NUP85-218ENST00000582681 DNMBPQ6XZF7 1577 aa13.88□□□□□ -0.19
NUP85-218ENST00000582681 TOPBP1Q92547 1522 aa13.88□□□□□ -0.19
NUP85-218ENST00000582681 CUX1P39880 1505 aa13.8□□□□□ -0.2
NUP85-218ENST00000582681 IFT140Q96RY7 1462 aa13.78□□□□□ -0.2
NUP85-218ENST00000582681 POLA1P09884 1462 aaPredicted RBP13.77□□□□□ -0.21
NUP85-218ENST00000582681 TARBP1Q13395 1621 aaKnown RBP13.77□□□□□ -0.21
NUP85-218ENST00000582681 BIVM-ERCC5R4GMW8 1640 aa13.75□□□□□ -0.21
NUP85-218ENST00000582681 TOP2BQ02880 1626 aa13.74□□□□□ -0.21
NUP85-218ENST00000582681 WDR97A6NE52 1622 aa13.73□□□□□ -0.21
NUP85-218ENST00000582681 FGD5Q6ZNL6 1462 aa13.72□□□□□ -0.21
NUP85-218ENST00000582681 WRNQ14191 1432 aaPredicted RBP eCLIP13.71□□□□□ -0.22
NUP85-218ENST00000582681 SYNJ1O43426 1573 aa13.69□□□□□ -0.22
NUP85-218ENST00000582681 ZNF608Q9ULD9 1512 aaPredicted RBP13.67□□□□□ -0.22
NUP85-218ENST00000582681 EIF4G3O43432 1585 aaKnown RBP13.66□□□□□ -0.22
NUP85-218ENST00000582681 SOGA1O94964 1423 aa13.65□□□□□ -0.22
NUP85-218ENST00000582681 ABCA10Q8WWZ4 1543 aa13.65□□□□□ -0.22
NUP85-218ENST00000582681 RAD54L2Q9Y4B4 1467 aa13.63□□□□□ -0.23
NUP85-218ENST00000582681 ABCA5Q8WWZ7 1642 aa13.61□□□□□ -0.23
NUP85-218ENST00000582681 AQRO60306 1485 aaKnown RBP eCLIP13.57□□□□□ -0.243e-7■■■■□ 19.7
NUP85-218ENST00000582681 TDRD9Q8NDG6 1382 aaKnown RBP13.54□□□□□ -0.24
NUP85-218ENST00000582681 GRIN2BQ13224 1484 aa13.54□□□□□ -0.24
NUP85-218ENST00000582681 GAPVD1Q14C86 1478 aa13.53□□□□□ -0.24
NUP85-218ENST00000582681 MAGI1Q96QZ7 1491 aaPredicted RBP13.53□□□□□ -0.24
NUP85-218ENST00000582681 PBRM1Q86U86 1689 aa13.5□□□□□ -0.25
NUP85-218ENST00000582681 DNAJC5Q9H3Z4 198 aa13.5□□□□□ -0.25
NUP85-218ENST00000582681 ERICH3Q5RHP9 1530 aa13.49□□□□□ -0.25
NUP85-218ENST00000582681 SNAPC4Q5SXM2 1469 aa13.47□□□□□ -0.25
NUP85-218ENST00000582681 SYNJ2O15056 1496 aa13.46□□□□□ -0.25
NUP85-218ENST00000582681 ADAMTS12P58397 1594 aa13.44□□□□□ -0.26
NUP85-218ENST00000582681 CHD1O14646 1710 aa13.44□□□□□ -0.26
NUP85-218ENST00000582681 KIF27Q86VH2 1401 aa13.4□□□□□ -0.26
NUP85-218ENST00000582681 OSCARQ8IYS5 282 aa13.4□□□□□ -0.26
NUP85-218ENST00000582681 FHAD1B1AJZ9 1412 aa13.39□□□□□ -0.27
NUP85-218ENST00000582681 CLASP1Q7Z460 1538 aa13.38□□□□□ -0.27
NUP85-218ENST00000582681 CUL7Q14999 1698 aa13.37□□□□□ -0.27
NUP85-218ENST00000582681 GRIN2AQ12879 1464 aa13.37□□□□□ -0.27
NUP85-218ENST00000582681 IGF1RP08069 1367 aa13.37□□□□□ -0.27
NUP85-218ENST00000582681 NUP160Q12769 1436 aa13.36□□□□□ -0.27
NUP85-218ENST00000582681 CEP170Q5SW79 1584 aa13.3□□□□□ -0.28
NUP85-218ENST00000582681 CHMP7Q8WUX9 453 aaPredicted RBP13.3□□□□□ -0.28
NUP85-218ENST00000582681 TRIM41Q8WV44 630 aa13.29□□□□□ -0.28
NUP85-218ENST00000582681 SHROOM2Q13796 1616 aa13.28□□□□□ -0.28
NUP85-218ENST00000582681 RUSC2Q8N2Y8 1516 aa13.27□□□□□ -0.29
NUP85-218ENST00000582681 ARHGEF11O15085 1522 aa13.26□□□□□ -0.29
NUP85-218ENST00000582681 EEA1Q15075 1411 aa13.26□□□□□ -0.29
NUP85-218ENST00000582681 PRXQ9BXM0 1461 aa13.24□□□□□ -0.29
NUP85-218ENST00000582681 CARMIL1Q5VZK9 1371 aa13.24□□□□□ -0.29
NUP85-218ENST00000582681 FBLN2P98095 1184 aa13.24□□□□□ -0.29
NUP85-218ENST00000582681 CHIC1Q5VXU3 224 aa13.24□□□□□ -0.29
NUP85-218ENST00000582681 RIMBP3CA6NJZ7 1639 aa13.24□□□□□ -0.29
NUP85-218ENST00000582681 RIMBP3BA6NNM3 1639 aa13.24□□□□□ -0.29
NUP85-218ENST00000582681 RIMBP3Q9UFD9 1639 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms