RNA–Protein interactions for RNA: ENST00000582614.1

MIR3939-201, Transcript of microRNA 3939, humanhuman

BASIC

Gene MIR3939, Length 106 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3939-201ENST00000582614 NISCHQ9Y2I1 1504 aa11.14□□□□□ -0.63
MIR3939-201ENST00000582614 ABCC9O60706 1549 aa10.38□□□□□ -0.75
MIR3939-201ENST00000582614 CCDC180Q9P1Z9 1646 aa10.08□□□□□ -0.8
MIR3939-201ENST00000582614 DNAJC5BQ9UF47 199 aa9.97□□□□□ -0.81
MIR3939-201ENST00000582614 RB1CC1Q8TDY2 1594 aa9.72□□□□□ -0.85
MIR3939-201ENST00000582614 PABPN1Q86U42 306 aaKnown RBP eCLIP9.66□□□□□ -0.86
MIR3939-201ENST00000582614 DCAF8L2P0C7V8 631 aa9.64□□□□□ -0.87
MIR3939-201ENST00000582614 NACADO15069 1562 aa9.58□□□□□ -0.88
MIR3939-201ENST00000582614 UNC13AQ9UPW8 1703 aa9.57□□□□□ -0.88
MIR3939-201ENST00000582614 BICRAQ9NZM4 1560 aa9.46□□□□□ -0.89
MIR3939-201ENST00000582614 CC2D2AQ9P2K1 1620 aa9.34□□□□□ -0.91
MIR3939-201ENST00000582614 CECR2Q9BXF3 1484 aa9.34□□□□□ -0.91
MIR3939-201ENST00000582614 MYO15BQ96JP2 1530 aa9.31□□□□□ -0.92
MIR3939-201ENST00000582614 DNAJC5Q9H3Z4 198 aa9.28□□□□□ -0.92
MIR3939-201ENST00000582614 EIF4G1Q04637 1599 aaKnown RBP9.24□□□□□ -0.93
MIR3939-201ENST00000582614 SCRIBQ14160 1630 aa9.23□□□□□ -0.93
MIR3939-201ENST00000582614 SHROOM4Q9ULL8 1493 aa9.21□□□□□ -0.94
MIR3939-201ENST00000582614 ZCCHC6Q5VYS8 1495 aaKnown RBP9.16□□□□□ -0.94
MIR3939-201ENST00000582614 DCAF1Q9Y4B6 1507 aa9.13□□□□□ -0.95
MIR3939-201ENST00000582614 CUX2O14529 1486 aa8.96□□□□□ -0.98
MIR3939-201ENST00000582614 ERCC6Q03468 1493 aa8.96□□□□□ -0.98
MIR3939-201ENST00000582614 NESP48681 1621 aa8.86□□□□□ -0.99
MIR3939-201ENST00000582614 TRIM41Q8WV44 630 aa8.85□□□□□ -0.99
MIR3939-201ENST00000582614 NCAPD3P42695 1498 aa8.84□□□□□ -0.99
MIR3939-201ENST00000582614 ATAD2BQ9ULI0 1458 aa8.81□□□□□ -1
MIR3939-201ENST00000582614 SMARCA2P51531 1590 aa8.76□□□□□ -1.01
MIR3939-201ENST00000582614 THOC2Q8NI27 1593 aaKnown RBP8.76□□□□□ -1.01
MIR3939-201ENST00000582614 SMARCA4P51532 1647 aa8.76□□□□□ -1.01
MIR3939-201ENST00000582614 HMGXB3Q12766 1538 aa8.75□□□□□ -1.01
MIR3939-201ENST00000582614 KIF21AQ7Z4S6 1674 aa8.74□□□□□ -1.01
MIR3939-201ENST00000582614 BAZ1BQ9UIG0 1483 aaKnown RBP8.72□□□□□ -1.01
MIR3939-201ENST00000582614 LAMC3Q9Y6N6 1575 aa8.69□□□□□ -1.02
MIR3939-201ENST00000582614 BAZ1AQ9NRL2 1556 aaPredicted RBP8.65□□□□□ -1.02
MIR3939-201ENST00000582614 PDS5BQ9NTI5 1447 aa8.65□□□□□ -1.02
MIR3939-201ENST00000582614 MROH2BQ7Z745 1585 aa8.62□□□□□ -1.03
MIR3939-201ENST00000582614 PEG3Q9GZU2 1588 aa8.61□□□□□ -1.03
MIR3939-201ENST00000582614 MRC2Q9UBG0 1479 aa8.6□□□□□ -1.03
MIR3939-201ENST00000582614 CADPSQ9ULU8 1353 aa8.59□□□□□ -1.03
MIR3939-201ENST00000582614 OSCARQ8IYS5 282 aa8.58□□□□□ -1.04
MIR3939-201ENST00000582614 WDR62O43379 1518 aa8.57□□□□□ -1.04
MIR3939-201ENST00000582614 WIZO95785 1651 aa8.53□□□□□ -1.04
MIR3939-201ENST00000582614 CEP164Q9UPV0 1460 aa8.52□□□□□ -1.05
MIR3939-201ENST00000582614 FANCD2Q9BXW9 1451 aa8.51□□□□□ -1.05
MIR3939-201ENST00000582614 RIMBP3CA6NJZ7 1639 aa8.5□□□□□ -1.05
MIR3939-201ENST00000582614 RIMBP3BA6NNM3 1639 aa8.5□□□□□ -1.05
MIR3939-201ENST00000582614 RIMBP3Q9UFD9 1639 aa8.5□□□□□ -1.05
MIR3939-201ENST00000582614 URB2Q14146 1524 aaKnown RBP8.46□□□□□ -1.05
MIR3939-201ENST00000582614 CYB5RLQ6IPT4 315 aa8.43□□□□□ -1.06
MIR3939-201ENST00000582614 CFTRP13569 1480 aa8.43□□□□□ -1.06
MIR3939-201ENST00000582614 TRHP20396 242 aaPredicted RBP8.42□□□□□ -1.06
MIR3939-201ENST00000582614 ARHGEF11O15085 1522 aa8.42□□□□□ -1.06
MIR3939-201ENST00000582614 ZNF608Q9ULD9 1512 aaPredicted RBP8.41□□□□□ -1.06
MIR3939-201ENST00000582614 PRDM2Q13029 1718 aa8.37□□□□□ -1.07
MIR3939-201ENST00000582614 CHD1O14646 1710 aa8.36□□□□□ -1.07
MIR3939-201ENST00000582614 IFT140Q96RY7 1462 aa8.35□□□□□ -1.07
MIR3939-201ENST00000582614 FBLN2P98095 1184 aa8.35□□□□□ -1.07
MIR3939-201ENST00000582614 TOP2AP11388 1531 aaKnown RBP8.34□□□□□ -1.07
MIR3939-201ENST00000582614 AEBP2Q6ZN18 517 aaPredicted RBP8.34□□□□□ -1.07
MIR3939-201ENST00000582614 RSF1Q96T23 1441 aaPredicted RBP8.34□□□□□ -1.07
MIR3939-201ENST00000582614 EIF4G3O43432 1585 aaKnown RBP8.33□□□□□ -1.08
MIR3939-201ENST00000582614 ARAP1Q96P48 1450 aa8.32□□□□□ -1.08
MIR3939-201ENST00000582614 TOPBP1Q92547 1522 aa8.32□□□□□ -1.08
MIR3939-201ENST00000582614 AQRO60306 1485 aaKnown RBP eCLIP8.32□□□□□ -1.08
MIR3939-201ENST00000582614 CCDC88BA6NC98 1476 aa8.28□□□□□ -1.08
MIR3939-201ENST00000582614 TARBP1Q13395 1621 aaKnown RBP8.26□□□□□ -1.09
MIR3939-201ENST00000582614 DNMBPQ6XZF7 1577 aa8.26□□□□□ -1.09
MIR3939-201ENST00000582614 ABCC8Q09428 1581 aa8.24□□□□□ -1.09
MIR3939-201ENST00000582614 TDRD9Q8NDG6 1382 aaKnown RBP8.23□□□□□ -1.09
MIR3939-201ENST00000582614 RAD54L2Q9Y4B4 1467 aa8.23□□□□□ -1.09
MIR3939-201ENST00000582614 POLA1P09884 1462 aaPredicted RBP8.21□□□□□ -1.09
MIR3939-201ENST00000582614 CHMP7Q8WUX9 453 aaPredicted RBP8.21□□□□□ -1.1
MIR3939-201ENST00000582614 SNAPC4Q5SXM2 1469 aa8.19□□□□□ -1.1
MIR3939-201ENST00000582614 SOGA1O94964 1423 aa8.19□□□□□ -1.1
MIR3939-201ENST00000582614 CLASP1Q7Z460 1538 aa8.19□□□□□ -1.1
MIR3939-201ENST00000582614 SYNJ1O43426 1573 aa8.17□□□□□ -1.1
MIR3939-201ENST00000582614 GAPVD1Q14C86 1478 aa8.14□□□□□ -1.11
MIR3939-201ENST00000582614 FGD5Q6ZNL6 1462 aa8.14□□□□□ -1.11
MIR3939-201ENST00000582614 SYNJ2O15056 1496 aa8.12□□□□□ -1.11
MIR3939-201ENST00000582614 GRIN2BQ13224 1484 aa8.12□□□□□ -1.11
MIR3939-201ENST00000582614 MAGI1Q96QZ7 1491 aaPredicted RBP8.12□□□□□ -1.11
MIR3939-201ENST00000582614 PBRM1Q86U86 1689 aa8.11□□□□□ -1.11
MIR3939-201ENST00000582614 ERCC6L2Q5T890 1561 aa8.1□□□□□ -1.11
MIR3939-201ENST00000582614 CUX1P39880 1505 aa8.1□□□□□ -1.11
MIR3939-201ENST00000582614 WDR97A6NE52 1622 aa8.09□□□□□ -1.11
MIR3939-201ENST00000582614 KIF13AQ9H1H9 1805 aa8.07□□□□□ -1.12
MIR3939-201ENST00000582614 CEP170Q5SW79 1584 aa8.04□□□□□ -1.12
MIR3939-201ENST00000582614 ABCA5Q8WWZ7 1642 aa8.03□□□□□ -1.12
MIR3939-201ENST00000582614 GRIN2AQ12879 1464 aa8.02□□□□□ -1.13
MIR3939-201ENST00000582614 ABCA10Q8WWZ4 1543 aa8□□□□□ -1.13
MIR3939-201ENST00000582614 ILDR1Q86SU0 546 aaPredicted RBP8□□□□□ -1.13
MIR3939-201ENST00000582614 FAM69CQ0P6D2 419 aa7.99□□□□□ -1.13
MIR3939-201ENST00000582614 SHROOM2Q13796 1616 aa7.99□□□□□ -1.13
MIR3939-201ENST00000582614 TSPOAP1O95153 1857 aa7.98□□□□□ -1.13
MIR3939-201ENST00000582614 ADAMTS12P58397 1594 aa7.98□□□□□ -1.13
MIR3939-201ENST00000582614 NUP160Q12769 1436 aa7.98□□□□□ -1.13
MIR3939-201ENST00000582614 KDM4FA0A1W2PPD8 638 aa7.98□□□□□ -1.13
MIR3939-201ENST00000582614 PRG4Q92954 1404 aaPredicted RBP7.97□□□□□ -1.13
MIR3939-201ENST00000582614 NPM1P06748 294 aaKnown RBP eCLIP7.96□□□□□ -1.14
MIR3939-201ENST00000582614 JPH4Q96JJ6 628 aa7.95□□□□□ -1.14
MIR3939-201ENST00000582614 FHAD1B1AJZ9 1412 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms