RNA–Protein interactions for RNA: ENST00000582421.1

RN7SL404P-201, Transcript of RNA, 7SL, cytoplasmic 404, pseudogene, humanhuman

BASIC

Gene RN7SL404P, Length 281 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL404P-201ENST00000582421 NISCHQ9Y2I1 1504 aa15.31■□□□□ 0.04
RN7SL404P-201ENST00000582421 ABCC9O60706 1549 aa13.67□□□□□ -0.22
RN7SL404P-201ENST00000582421 CCDC180Q9P1Z9 1646 aa13.56□□□□□ -0.24
RN7SL404P-201ENST00000582421 DNAJC5BQ9UF47 199 aa13.08□□□□□ -0.32
RN7SL404P-201ENST00000582421 ZCCHC6Q5VYS8 1495 aaKnown RBP12.88□□□□□ -0.35
RN7SL404P-201ENST00000582421 DCAF1Q9Y4B6 1507 aa12.82□□□□□ -0.36
RN7SL404P-201ENST00000582421 RB1CC1Q8TDY2 1594 aa12.81□□□□□ -0.36
RN7SL404P-201ENST00000582421 MYO15BQ96JP2 1530 aa12.72□□□□□ -0.37
RN7SL404P-201ENST00000582421 PABPN1Q86U42 306 aaKnown RBP eCLIP12.72□□□□□ -0.37
RN7SL404P-201ENST00000582421 DCAF8L2P0C7V8 631 aa12.7□□□□□ -0.38
RN7SL404P-201ENST00000582421 NACADO15069 1562 aa12.61□□□□□ -0.39
RN7SL404P-201ENST00000582421 UNC13AQ9UPW8 1703 aa12.61□□□□□ -0.39
RN7SL404P-201ENST00000582421 BICRAQ9NZM4 1560 aa12.46□□□□□ -0.42
RN7SL404P-201ENST00000582421 CC2D2AQ9P2K1 1620 aa12.3□□□□□ -0.44
RN7SL404P-201ENST00000582421 CECR2Q9BXF3 1484 aa12.3□□□□□ -0.44
RN7SL404P-201ENST00000582421 SCRIBQ14160 1630 aa12.23□□□□□ -0.45
RN7SL404P-201ENST00000582421 SHROOM4Q9ULL8 1493 aa12.22□□□□□ -0.45
RN7SL404P-201ENST00000582421 EIF4G1Q04637 1599 aaKnown RBP12.18□□□□□ -0.46
RN7SL404P-201ENST00000582421 DNAJC5Q9H3Z4 198 aa12.17□□□□□ -0.46
RN7SL404P-201ENST00000582421 BAZ1AQ9NRL2 1556 aaPredicted RBP11.93□□□□□ -0.5
RN7SL404P-201ENST00000582421 ERCC6Q03468 1493 aa11.82□□□□□ -0.52
RN7SL404P-201ENST00000582421 SUPT5HO00267 1087 aaKnown RBP11.81□□□□□ -0.52
RN7SL404P-201ENST00000582421 SMARCA4P51532 1647 aa11.8□□□□□ -0.52
RN7SL404P-201ENST00000582421 CUX2O14529 1486 aa11.8□□□□□ -0.52
RN7SL404P-201ENST00000582421 RSF1Q96T23 1441 aaPredicted RBP11.78□□□□□ -0.52
RN7SL404P-201ENST00000582421 PEG3Q9GZU2 1588 aa11.73□□□□□ -0.53
RN7SL404P-201ENST00000582421 SMARCA2P51531 1590 aa11.72□□□□□ -0.53
RN7SL404P-201ENST00000582421 MROH2BQ7Z745 1585 aa11.71□□□□□ -0.53
RN7SL404P-201ENST00000582421 TOP2AP11388 1531 aaKnown RBP11.66□□□□□ -0.54
RN7SL404P-201ENST00000582421 NESP48681 1621 aa11.66□□□□□ -0.54
RN7SL404P-201ENST00000582421 TRIM41Q8WV44 630 aa11.65□□□□□ -0.54
RN7SL404P-201ENST00000582421 WIZO95785 1651 aa11.64□□□□□ -0.55
RN7SL404P-201ENST00000582421 NCAPD3P42695 1498 aa11.63□□□□□ -0.55
RN7SL404P-201ENST00000582421 HMGXB3Q12766 1538 aa11.6□□□□□ -0.55
RN7SL404P-201ENST00000582421 ATAD2BQ9ULI0 1458 aa11.6□□□□□ -0.55
RN7SL404P-201ENST00000582421 BAZ1BQ9UIG0 1483 aaKnown RBP11.57□□□□□ -0.56
RN7SL404P-201ENST00000582421 THOC2Q8NI27 1593 aaKnown RBP11.54□□□□□ -0.56
RN7SL404P-201ENST00000582421 KIF21AQ7Z4S6 1674 aa11.52□□□□□ -0.57
RN7SL404P-201ENST00000582421 LAMC3Q9Y6N6 1575 aa11.45□□□□□ -0.58
RN7SL404P-201ENST00000582421 CCDC88BA6NC98 1476 aa11.41□□□□□ -0.58
RN7SL404P-201ENST00000582421 PDS5BQ9NTI5 1447 aa11.4□□□□□ -0.58
RN7SL404P-201ENST00000582421 PRDM2Q13029 1718 aa11.35□□□□□ -0.59
RN7SL404P-201ENST00000582421 MRC2Q9UBG0 1479 aa11.33□□□□□ -0.6
RN7SL404P-201ENST00000582421 CADPSQ9ULU8 1353 aa11.3□□□□□ -0.6
RN7SL404P-201ENST00000582421 CHIC1Q5VXU3 224 aa11.3□□□□□ -0.6
RN7SL404P-201ENST00000582421 WDR62O43379 1518 aa11.3□□□□□ -0.6
RN7SL404P-201ENST00000582421 OSCARQ8IYS5 282 aa11.28□□□□□ -0.6
RN7SL404P-201ENST00000582421 CFTRP13569 1480 aa11.25□□□□□ -0.61
RN7SL404P-201ENST00000582421 CEP164Q9UPV0 1460 aa11.25□□□□□ -0.61
RN7SL404P-201ENST00000582421 FANCD2Q9BXW9 1451 aa11.2□□□□□ -0.62
RN7SL404P-201ENST00000582421 WRNQ14191 1432 aaPredicted RBP eCLIP11.19□□□□□ -0.62
RN7SL404P-201ENST00000582421 RIMBP3CA6NJZ7 1639 aa11.19□□□□□ -0.62
RN7SL404P-201ENST00000582421 RIMBP3BA6NNM3 1639 aa11.19□□□□□ -0.62
RN7SL404P-201ENST00000582421 RIMBP3Q9UFD9 1639 aa11.19□□□□□ -0.62
RN7SL404P-201ENST00000582421 EEA1Q15075 1411 aa11.18□□□□□ -0.62
RN7SL404P-201ENST00000582421 ABCC8Q09428 1581 aa11.14□□□□□ -0.63
RN7SL404P-201ENST00000582421 URB2Q14146 1524 aaKnown RBP11.14□□□□□ -0.63
RN7SL404P-201ENST00000582421 TOP2BQ02880 1626 aa11.13□□□□□ -0.63
RN7SL404P-201ENST00000582421 BIVM-ERCC5R4GMW8 1640 aa11.13□□□□□ -0.63
RN7SL404P-201ENST00000582421 TRHP20396 242 aaPredicted RBP11.1□□□□□ -0.63
RN7SL404P-201ENST00000582421 CYB5RLQ6IPT4 315 aa11.09□□□□□ -0.63
RN7SL404P-201ENST00000582421 ARHGEF11O15085 1522 aa11.09□□□□□ -0.63
RN7SL404P-201ENST00000582421 ZNF608Q9ULD9 1512 aaPredicted RBP11.06□□□□□ -0.64
RN7SL404P-201ENST00000582421 SYNJ1O43426 1573 aa11.05□□□□□ -0.64
RN7SL404P-201ENST00000582421 DNMBPQ6XZF7 1577 aa11.04□□□□□ -0.64
RN7SL404P-201ENST00000582421 CHD1O14646 1710 aa11.01□□□□□ -0.65
RN7SL404P-201ENST00000582421 IFT140Q96RY7 1462 aa11□□□□□ -0.65
RN7SL404P-201ENST00000582421 FBLN2P98095 1184 aa11□□□□□ -0.65
RN7SL404P-201ENST00000582421 CUX1P39880 1505 aa10.99□□□□□ -0.65
RN7SL404P-201ENST00000582421 AEBP2Q6ZN18 517 aaPredicted RBP10.99□□□□□ -0.65
RN7SL404P-201ENST00000582421 EIF4G3O43432 1585 aaKnown RBP10.99□□□□□ -0.65
RN7SL404P-201ENST00000582421 KIF27Q86VH2 1401 aa10.97□□□□□ -0.65
RN7SL404P-201ENST00000582421 ARAP1Q96P48 1450 aa10.96□□□□□ -0.65
RN7SL404P-201ENST00000582421 TOPBP1Q92547 1522 aa10.95□□□□□ -0.66
RN7SL404P-201ENST00000582421 WDR97A6NE52 1622 aa10.95□□□□□ -0.66
RN7SL404P-201ENST00000582421 KIF21BO75037 1637 aa10.95□□□□□ -0.66
RN7SL404P-201ENST00000582421 AQRO60306 1485 aaKnown RBP eCLIP10.94□□□□□ -0.66
RN7SL404P-201ENST00000582421 GOLGA3Q08378 1498 aa10.92□□□□□ -0.66
RN7SL404P-201ENST00000582421 FGD5Q6ZNL6 1462 aa10.92□□□□□ -0.66
RN7SL404P-201ENST00000582421 ERICH3Q5RHP9 1530 aa10.91□□□□□ -0.66
RN7SL404P-201ENST00000582421 CSRNP3Q8WYN3 585 aa10.9□□□□□ -0.66
RN7SL404P-201ENST00000582421 ABCA10Q8WWZ4 1543 aa10.89□□□□□ -0.67
RN7SL404P-201ENST00000582421 TARBP1Q13395 1621 aaKnown RBP10.87□□□□□ -0.67
RN7SL404P-201ENST00000582421 POLA1P09884 1462 aaPredicted RBP10.87□□□□□ -0.67
RN7SL404P-201ENST00000582421 SOGA1O94964 1423 aa10.87□□□□□ -0.67
RN7SL404P-201ENST00000582421 CUL7Q14999 1698 aa10.87□□□□□ -0.67
RN7SL404P-201ENST00000582421 FAM9AQ8IZU1 332 aaPredicted RBP10.84□□□□□ -0.67
RN7SL404P-201ENST00000582421 RAD54L2Q9Y4B4 1467 aa10.84□□□□□ -0.67
RN7SL404P-201ENST00000582421 TDRD9Q8NDG6 1382 aaKnown RBP10.83□□□□□ -0.68
RN7SL404P-201ENST00000582421 TNIKQ9UKE5 1360 aa10.83□□□□□ -0.68
RN7SL404P-201ENST00000582421 CHMP7Q8WUX9 453 aaPredicted RBP10.81□□□□□ -0.68
RN7SL404P-201ENST00000582421 SNAPC4Q5SXM2 1469 aa10.81□□□□□ -0.68
RN7SL404P-201ENST00000582421 PRXQ9BXM0 1461 aa10.8□□□□□ -0.68
RN7SL404P-201ENST00000582421 ABCA5Q8WWZ7 1642 aa10.8□□□□□ -0.68
RN7SL404P-201ENST00000582421 CLASP1Q7Z460 1538 aa10.79□□□□□ -0.68
RN7SL404P-201ENST00000582421 RAPGEF2Q9Y4G8 1499 aa10.77□□□□□ -0.69
RN7SL404P-201ENST00000582421 UBTFP17480 764 aaKnown RBP10.77□□□□□ -0.69
RN7SL404P-201ENST00000582421 GAPVD1Q14C86 1478 aa10.76□□□□□ -0.69
RN7SL404P-201ENST00000582421 RUSC2Q8N2Y8 1516 aa10.75□□□□□ -0.69
RN7SL404P-201ENST00000582421 PBRM1Q86U86 1689 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms