RNA–Protein interactions for RNA: ENST00000582414.1

CACNB1-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 4

Gene CACNB1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-209ENST00000582414 NISCHQ9Y2I1 1504 aa41.91■■■■■ 4.3
CACNB1-209ENST00000582414 CCDC180Q9P1Z9 1646 aa37.43■■■■□ 3.58
CACNB1-209ENST00000582414 ABCC9O60706 1549 aa36.98■■■■□ 3.51
CACNB1-209ENST00000582414 RB1CC1Q8TDY2 1594 aa35.42■■■■□ 3.26
CACNB1-209ENST00000582414 NACADO15069 1562 aa35.3■■■■□ 3.24
CACNB1-209ENST00000582414 DCAF8L2P0C7V8 631 aa35.12■■■■□ 3.21
CACNB1-209ENST00000582414 MYO15BQ96JP2 1530 aa35.01■■■■□ 3.2
CACNB1-209ENST00000582414 ZCCHC6Q5VYS8 1495 aaKnown RBP34.8■■■■□ 3.16
CACNB1-209ENST00000582414 DCAF1Q9Y4B6 1507 aa34.69■■■■□ 3.14
CACNB1-209ENST00000582414 UNC13AQ9UPW8 1703 aa34.61■■■■□ 3.13
CACNB1-209ENST00000582414 PABPN1Q86U42 306 aaKnown RBP eCLIP34.5■■■■□ 3.11
CACNB1-209ENST00000582414 DNAJC5BQ9UF47 199 aa34.4■■■■□ 3.1
CACNB1-209ENST00000582414 BICRAQ9NZM4 1560 aa34.39■■■■□ 3.1
CACNB1-209ENST00000582414 SCRIBQ14160 1630 aa34.05■■■■□ 3.04
CACNB1-209ENST00000582414 SHROOM4Q9ULL8 1493 aa34.01■■■■□ 3.04
CACNB1-209ENST00000582414 EIF4G1Q04637 1599 aaKnown RBP33.49■■■□□ 2.95
CACNB1-209ENST00000582414 CC2D2AQ9P2K1 1620 aa33.46■■■□□ 2.95
CACNB1-209ENST00000582414 CECR2Q9BXF3 1484 aa33.3■■■□□ 2.92
CACNB1-209ENST00000582414 NCAPD3P42695 1498 aa32.61■■■□□ 2.81
CACNB1-209ENST00000582414 SMARCA4P51532 1647 aa32.58■■■□□ 2.81
CACNB1-209ENST00000582414 ATAD2BQ9ULI0 1458 aa32.54■■■□□ 2.8
CACNB1-209ENST00000582414 BAZ1AQ9NRL2 1556 aaPredicted RBP32.49■■■□□ 2.79
CACNB1-209ENST00000582414 SMARCA2P51531 1590 aa32.46■■■□□ 2.79
CACNB1-209ENST00000582414 HMGXB3Q12766 1538 aa32.37■■■□□ 2.77
CACNB1-209ENST00000582414 PEG3Q9GZU2 1588 aa32.32■■■□□ 2.76
CACNB1-209ENST00000582414 MROH2BQ7Z745 1585 aa32.27■■■□□ 2.76
CACNB1-209ENST00000582414 BAZ1BQ9UIG0 1483 aaKnown RBP32.21■■■□□ 2.75
CACNB1-209ENST00000582414 ERCC6Q03468 1493 aa31.89■■■□□ 2.7
CACNB1-209ENST00000582414 NESP48681 1621 aa31.89■■■□□ 2.7
CACNB1-209ENST00000582414 WIZO95785 1651 aa31.88■■■□□ 2.69
CACNB1-209ENST00000582414 LAMC3Q9Y6N6 1575 aa31.77■■■□□ 2.68
CACNB1-209ENST00000582414 RSF1Q96T23 1441 aaPredicted RBP31.77■■■□□ 2.68
CACNB1-209ENST00000582414 CUX2O14529 1486 aa31.77■■■□□ 2.68
CACNB1-209ENST00000582414 CADPSQ9ULU8 1353 aa31.62■■■□□ 2.65
CACNB1-209ENST00000582414 PDS5BQ9NTI5 1447 aa31.58■■■□□ 2.65
CACNB1-209ENST00000582414 TOP2AP11388 1531 aaKnown RBP31.53■■■□□ 2.64
CACNB1-209ENST00000582414 THOC2Q8NI27 1593 aaKnown RBP31.51■■■□□ 2.63
CACNB1-209ENST00000582414 KIF21AQ7Z4S6 1674 aa31.49■■■□□ 2.63
CACNB1-209ENST00000582414 CFTRP13569 1480 aa31.35■■■□□ 2.61
CACNB1-209ENST00000582414 DNAJC5Q9H3Z4 198 aa31.32■■■□□ 2.6
CACNB1-209ENST00000582414 MRC2Q9UBG0 1479 aa31.27■■■□□ 2.6
CACNB1-209ENST00000582414 FANCD2Q9BXW9 1451 aa31.22■■■□□ 2.59
CACNB1-209ENST00000582414 CEP164Q9UPV0 1460 aa31.21■■■□□ 2.59
CACNB1-209ENST00000582414 CCDC88BA6NC98 1476 aa31.19■■■□□ 2.58
CACNB1-209ENST00000582414 WDR62O43379 1518 aa31.19■■■□□ 2.58
CACNB1-209ENST00000582414 PRDM2Q13029 1718 aa31.03■■■□□ 2.56
CACNB1-209ENST00000582414 URB2Q14146 1524 aaKnown RBP30.94■■■□□ 2.54
CACNB1-209ENST00000582414 ABCC8Q09428 1581 aa30.69■■■□□ 2.5
CACNB1-209ENST00000582414 TOPBP1Q92547 1522 aa30.68■■■□□ 2.5
CACNB1-209ENST00000582414 DNMBPQ6XZF7 1577 aa30.61■■■□□ 2.49
CACNB1-209ENST00000582414 IFT140Q96RY7 1462 aa30.6■■■□□ 2.49
CACNB1-209ENST00000582414 SUPT5HO00267 1087 aaKnown RBP30.59■■■□□ 2.49
CACNB1-209ENST00000582414 ZNF608Q9ULD9 1512 aaPredicted RBP30.48■■■□□ 2.47
CACNB1-209ENST00000582414 OSCARQ8IYS5 282 aa30.4■■■□□ 2.46
CACNB1-209ENST00000582414 POLA1P09884 1462 aaPredicted RBP30.39■■■□□ 2.46
CACNB1-209ENST00000582414 TARBP1Q13395 1621 aaKnown RBP30.39■■■□□ 2.46
CACNB1-209ENST00000582414 EIF4G3O43432 1585 aaKnown RBP30.32■■■□□ 2.44
CACNB1-209ENST00000582414 CUX1P39880 1505 aa30.29■■■□□ 2.44
CACNB1-209ENST00000582414 SOGA1O94964 1423 aa30.28■■■□□ 2.44
CACNB1-209ENST00000582414 AQRO60306 1485 aaKnown RBP eCLIP30.27■■■□□ 2.44
CACNB1-209ENST00000582414 RAD54L2Q9Y4B4 1467 aa30.25■■■□□ 2.43
CACNB1-209ENST00000582414 FGD5Q6ZNL6 1462 aa30.25■■■□□ 2.43
CACNB1-209ENST00000582414 TDRD9Q8NDG6 1382 aaKnown RBP30.15■■■□□ 2.42
CACNB1-209ENST00000582414 WDR97A6NE52 1622 aa30.14■■■□□ 2.41
CACNB1-209ENST00000582414 CHD1O14646 1710 aa30.02■■■□□ 2.4
CACNB1-209ENST00000582414 TRIM41Q8WV44 630 aa30■■■□□ 2.39
CACNB1-209ENST00000582414 ABCA10Q8WWZ4 1543 aa29.96■■■□□ 2.39
CACNB1-209ENST00000582414 GRIN2BQ13224 1484 aa29.96■■■□□ 2.39
CACNB1-209ENST00000582414 FBLN2P98095 1184 aa29.95■■■□□ 2.39
CACNB1-209ENST00000582414 WRNQ14191 1432 aaPredicted RBP eCLIP29.95■■■□□ 2.38
CACNB1-209ENST00000582414 SNAPC4Q5SXM2 1469 aa29.94■■■□□ 2.38
CACNB1-209ENST00000582414 MAGI1Q96QZ7 1491 aaPredicted RBP29.93■■■□□ 2.38
CACNB1-209ENST00000582414 TOP2BQ02880 1626 aa29.93■■■□□ 2.38
CACNB1-209ENST00000582414 BIVM-ERCC5R4GMW8 1640 aa29.93■■■□□ 2.38
CACNB1-209ENST00000582414 GAPVD1Q14C86 1478 aa29.91■■■□□ 2.38
CACNB1-209ENST00000582414 RIMBP3CA6NJZ7 1639 aa29.9■■■□□ 2.38
CACNB1-209ENST00000582414 RIMBP3BA6NNM3 1639 aa29.9■■■□□ 2.38
CACNB1-209ENST00000582414 RIMBP3Q9UFD9 1639 aa29.9■■■□□ 2.38
CACNB1-209ENST00000582414 SYNJ1O43426 1573 aa29.87■■■□□ 2.37
CACNB1-209ENST00000582414 ARHGEF11O15085 1522 aa29.86■■■□□ 2.37
CACNB1-209ENST00000582414 ABCA5Q8WWZ7 1642 aa29.85■■■□□ 2.37
CACNB1-209ENST00000582414 CHMP7Q8WUX9 453 aaPredicted RBP29.84■■■□□ 2.37
CACNB1-209ENST00000582414 PBRM1Q86U86 1689 aa29.83■■■□□ 2.37
CACNB1-209ENST00000582414 SYNJ2O15056 1496 aa29.82■■■□□ 2.36
CACNB1-209ENST00000582414 CLASP1Q7Z460 1538 aa29.72■■■□□ 2.35
CACNB1-209ENST00000582414 CYB5RLQ6IPT4 315 aa29.62■■■□□ 2.33
CACNB1-209ENST00000582414 ERICH3Q5RHP9 1530 aa29.6■■■□□ 2.33
CACNB1-209ENST00000582414 ARAP1Q96P48 1450 aa29.59■■■□□ 2.33
CACNB1-209ENST00000582414 ADAMTS12P58397 1594 aa29.58■■■□□ 2.33
CACNB1-209ENST00000582414 GRIN2AQ12879 1464 aa29.56■■■□□ 2.32
CACNB1-209ENST00000582414 FHAD1B1AJZ9 1412 aa29.55■■■□□ 2.32
CACNB1-209ENST00000582414 NUP160Q12769 1436 aa29.48■■■□□ 2.31
CACNB1-209ENST00000582414 CEP170Q5SW79 1584 aa29.43■■■□□ 2.3
CACNB1-209ENST00000582414 KIF27Q86VH2 1401 aa29.36■■■□□ 2.29
CACNB1-209ENST00000582414 IGF1RP08069 1367 aa29.33■■■□□ 2.29
CACNB1-209ENST00000582414 SHROOM2Q13796 1616 aa29.3■■■□□ 2.28
CACNB1-209ENST00000582414 ERCC6L2Q5T890 1561 aa29.26■■■□□ 2.27
CACNB1-209ENST00000582414 CUL7Q14999 1698 aa29.21■■■□□ 2.27
CACNB1-209ENST00000582414 JPH4Q96JJ6 628 aa29.19■■■□□ 2.26
CACNB1-209ENST00000582414 RUSC2Q8N2Y8 1516 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms