RNA–Protein interactions for RNA: ENST00000582025.1

PLXDC1-219, Transcript of plexin domain containing 1, humanhuman

TSL 3

Gene PLXDC1, Length 339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXDC1-219ENST00000582025 NISCHQ9Y2I1 1504 aa31.49■■■□□ 2.63
PLXDC1-219ENST00000582025 CCDC180Q9P1Z9 1646 aa28.2■■■□□ 2.1
PLXDC1-219ENST00000582025 ABCC9O60706 1549 aa28.19■■■□□ 2.1
PLXDC1-219ENST00000582025 RB1CC1Q8TDY2 1594 aa26.81■■□□□ 1.88
PLXDC1-219ENST00000582025 DCAF8L2P0C7V8 631 aa26.65■■□□□ 1.86
PLXDC1-219ENST00000582025 NACADO15069 1562 aa26.63■■□□□ 1.85
PLXDC1-219ENST00000582025 DNAJC5BQ9UF47 199 aa26.37■■□□□ 1.81
PLXDC1-219ENST00000582025 UNC13AQ9UPW8 1703 aa26.29■■□□□ 1.8
PLXDC1-219ENST00000582025 PABPN1Q86U42 306 aaKnown RBP eCLIP26.29■■□□□ 1.8
PLXDC1-219ENST00000582025 MYO15BQ96JP2 1530 aa26.24■■□□□ 1.79
PLXDC1-219ENST00000582025 ZCCHC6Q5VYS8 1495 aaKnown RBP26.11■■□□□ 1.77
PLXDC1-219ENST00000582025 BICRAQ9NZM4 1560 aa26.05■■□□□ 1.76
PLXDC1-219ENST00000582025 DCAF1Q9Y4B6 1507 aa25.95■■□□□ 1.74
PLXDC1-219ENST00000582025 SCRIBQ14160 1630 aa25.77■■□□□ 1.72
PLXDC1-219ENST00000582025 SHROOM4Q9ULL8 1493 aa25.6■■□□□ 1.69
PLXDC1-219ENST00000582025 CC2D2AQ9P2K1 1620 aa25.45■■□□□ 1.67
PLXDC1-219ENST00000582025 EIF4G1Q04637 1599 aaKnown RBP25.4■■□□□ 1.66
PLXDC1-219ENST00000582025 CECR2Q9BXF3 1484 aa25.35■■□□□ 1.65
PLXDC1-219ENST00000582025 NCAPD3P42695 1498 aa24.58■■□□□ 1.52
PLXDC1-219ENST00000582025 SMARCA4P51532 1647 aa24.56■■□□□ 1.52
PLXDC1-219ENST00000582025 ATAD2BQ9ULI0 1458 aa24.55■■□□□ 1.52
PLXDC1-219ENST00000582025 SMARCA2P51531 1590 aa24.47■■□□□ 1.51
PLXDC1-219ENST00000582025 BAZ1AQ9NRL2 1556 aaPredicted RBP24.42■■□□□ 1.5
PLXDC1-219ENST00000582025 HMGXB3Q12766 1538 aa24.4■■□□□ 1.5
PLXDC1-219ENST00000582025 ERCC6Q03468 1493 aa24.32■■□□□ 1.48
PLXDC1-219ENST00000582025 BAZ1BQ9UIG0 1483 aaKnown RBP24.32■■□□□ 1.48
PLXDC1-219ENST00000582025 MROH2BQ7Z745 1585 aa24.29■■□□□ 1.48
PLXDC1-219ENST00000582025 PEG3Q9GZU2 1588 aa24.27■■□□□ 1.48
PLXDC1-219ENST00000582025 NESP48681 1621 aa24.24■■□□□ 1.47
PLXDC1-219ENST00000582025 CUX2O14529 1486 aa24.19■■□□□ 1.46
PLXDC1-219ENST00000582025 DNAJC5Q9H3Z4 198 aa24.1■■□□□ 1.45
PLXDC1-219ENST00000582025 WIZO95785 1651 aa24.04■■□□□ 1.44
PLXDC1-219ENST00000582025 LAMC3Q9Y6N6 1575 aa24.03■■□□□ 1.44
PLXDC1-219ENST00000582025 KIF21AQ7Z4S6 1674 aa23.95■■□□□ 1.43
PLXDC1-219ENST00000582025 THOC2Q8NI27 1593 aaKnown RBP23.95■■□□□ 1.42
PLXDC1-219ENST00000582025 PDS5BQ9NTI5 1447 aa23.89■■□□□ 1.41
PLXDC1-219ENST00000582025 CADPSQ9ULU8 1353 aa23.86■■□□□ 1.41
PLXDC1-219ENST00000582025 RSF1Q96T23 1441 aaPredicted RBP23.8■■□□□ 1.4
PLXDC1-219ENST00000582025 MRC2Q9UBG0 1479 aa23.68■■□□□ 1.38
PLXDC1-219ENST00000582025 TOP2AP11388 1531 aaKnown RBP23.68■■□□□ 1.38
PLXDC1-219ENST00000582025 CEP164Q9UPV0 1460 aa23.62■■□□□ 1.37
PLXDC1-219ENST00000582025 WDR62O43379 1518 aa23.62■■□□□ 1.37
PLXDC1-219ENST00000582025 FANCD2Q9BXW9 1451 aa23.61■■□□□ 1.37
PLXDC1-219ENST00000582025 CFTRP13569 1480 aa23.59■■□□□ 1.37
PLXDC1-219ENST00000582025 CCDC88BA6NC98 1476 aa23.43■■□□□ 1.34
PLXDC1-219ENST00000582025 PRDM2Q13029 1718 aa23.42■■□□□ 1.34
PLXDC1-219ENST00000582025 URB2Q14146 1524 aaKnown RBP23.41■■□□□ 1.34
PLXDC1-219ENST00000582025 TRIM41Q8WV44 630 aa23.18■■□□□ 1.3
PLXDC1-219ENST00000582025 TOPBP1Q92547 1522 aa23.18■■□□□ 1.3
PLXDC1-219ENST00000582025 OSCARQ8IYS5 282 aa23.13■■□□□ 1.29
PLXDC1-219ENST00000582025 ZNF608Q9ULD9 1512 aaPredicted RBP23.13■■□□□ 1.29
PLXDC1-219ENST00000582025 IFT140Q96RY7 1462 aa23.12■■□□□ 1.29
PLXDC1-219ENST00000582025 DNMBPQ6XZF7 1577 aa23.09■■□□□ 1.29
PLXDC1-219ENST00000582025 ABCC8Q09428 1581 aa23.08■■□□□ 1.29
PLXDC1-219ENST00000582025 EIF4G3O43432 1585 aaKnown RBP23■■□□□ 1.27
PLXDC1-219ENST00000582025 TARBP1Q13395 1621 aaKnown RBP22.96■■□□□ 1.27
PLXDC1-219ENST00000582025 POLA1P09884 1462 aaPredicted RBP22.94■■□□□ 1.26
PLXDC1-219ENST00000582025 AQRO60306 1485 aaKnown RBP eCLIP22.93■■□□□ 1.26
PLXDC1-219ENST00000582025 SUPT5HO00267 1087 aaKnown RBP22.9■■□□□ 1.26
PLXDC1-219ENST00000582025 RAD54L2Q9Y4B4 1467 aa22.89■■□□□ 1.25
PLXDC1-219ENST00000582025 RIMBP3CA6NJZ7 1639 aa22.86■■□□□ 1.25
PLXDC1-219ENST00000582025 RIMBP3BA6NNM3 1639 aa22.86■■□□□ 1.25
PLXDC1-219ENST00000582025 RIMBP3Q9UFD9 1639 aa22.86■■□□□ 1.25
PLXDC1-219ENST00000582025 CHD1O14646 1710 aa22.85■■□□□ 1.25
PLXDC1-219ENST00000582025 SOGA1O94964 1423 aa22.84■■□□□ 1.25
PLXDC1-219ENST00000582025 FGD5Q6ZNL6 1462 aa22.82■■□□□ 1.24
PLXDC1-219ENST00000582025 CUX1P39880 1505 aa22.82■■□□□ 1.24
PLXDC1-219ENST00000582025 TDRD9Q8NDG6 1382 aaKnown RBP22.81■■□□□ 1.24
PLXDC1-219ENST00000582025 FBLN2P98095 1184 aa22.81■■□□□ 1.24
PLXDC1-219ENST00000582025 ARHGEF11O15085 1522 aa22.77■■□□□ 1.24
PLXDC1-219ENST00000582025 SNAPC4Q5SXM2 1469 aa22.69■■□□□ 1.22
PLXDC1-219ENST00000582025 WDR97A6NE52 1622 aa22.67■■□□□ 1.22
PLXDC1-219ENST00000582025 CYB5RLQ6IPT4 315 aa22.64■■□□□ 1.21
PLXDC1-219ENST00000582025 GRIN2BQ13224 1484 aa22.61■■□□□ 1.21
PLXDC1-219ENST00000582025 CHMP7Q8WUX9 453 aaPredicted RBP22.61■■□□□ 1.21
PLXDC1-219ENST00000582025 MAGI1Q96QZ7 1491 aaPredicted RBP22.6■■□□□ 1.21
PLXDC1-219ENST00000582025 PBRM1Q86U86 1689 aa22.58■■□□□ 1.21
PLXDC1-219ENST00000582025 GAPVD1Q14C86 1478 aa22.56■■□□□ 1.2
PLXDC1-219ENST00000582025 ARAP1Q96P48 1450 aa22.55■■□□□ 1.2
PLXDC1-219ENST00000582025 ABCA10Q8WWZ4 1543 aa22.53■■□□□ 1.2
PLXDC1-219ENST00000582025 SYNJ1O43426 1573 aa22.53■■□□□ 1.2
PLXDC1-219ENST00000582025 SYNJ2O15056 1496 aa22.53■■□□□ 1.2
PLXDC1-219ENST00000582025 CLASP1Q7Z460 1538 aa22.52■■□□□ 1.2
PLXDC1-219ENST00000582025 ABCA5Q8WWZ7 1642 aa22.51■■□□□ 1.19
PLXDC1-219ENST00000582025 WRNQ14191 1432 aaPredicted RBP eCLIP22.47■■□□□ 1.19
PLXDC1-219ENST00000582025 BIVM-ERCC5R4GMW8 1640 aa22.46■■□□□ 1.19
PLXDC1-219ENST00000582025 TOP2BQ02880 1626 aa22.46■■□□□ 1.19
PLXDC1-219ENST00000582025 TRHP20396 242 aaPredicted RBP22.37■■□□□ 1.17
PLXDC1-219ENST00000582025 ADAMTS12P58397 1594 aa22.34■■□□□ 1.17
PLXDC1-219ENST00000582025 GRIN2AQ12879 1464 aa22.34■■□□□ 1.17
PLXDC1-219ENST00000582025 CEP170Q5SW79 1584 aa22.27■■□□□ 1.16
PLXDC1-219ENST00000582025 FHAD1B1AJZ9 1412 aa22.26■■□□□ 1.15
PLXDC1-219ENST00000582025 ERICH3Q5RHP9 1530 aa22.25■■□□□ 1.15
PLXDC1-219ENST00000582025 ERCC6L2Q5T890 1561 aa22.24■■□□□ 1.15
PLXDC1-219ENST00000582025 NUP160Q12769 1436 aa22.23■■□□□ 1.15
PLXDC1-219ENST00000582025 SHROOM2Q13796 1616 aa22.13■■□□□ 1.13
PLXDC1-219ENST00000582025 PRG4Q92954 1404 aaPredicted RBP22.05■■□□□ 1.12
PLXDC1-219ENST00000582025 JPH4Q96JJ6 628 aa22.04■■□□□ 1.12
PLXDC1-219ENST00000582025 RUSC2Q8N2Y8 1516 aa22.02■■□□□ 1.12
PLXDC1-219ENST00000582025 KIF27Q86VH2 1401 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms