RNA–Protein interactions for RNA: ENST00000582006.5

C19orf47-206, Transcript of chromosome 19 open reading frame 47, humanhuman

APPRIS ALT2 TSL 4

Gene C19orf47, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf47-206ENST00000582006 NISCHQ9Y2I1 1504 aa27.91■■■□□ 2.06
C19orf47-206ENST00000582006 ABCC9O60706 1549 aa25.48■■□□□ 1.67
C19orf47-206ENST00000582006 CCDC180Q9P1Z9 1646 aa25.26■■□□□ 1.63
C19orf47-206ENST00000582006 DNAJC5BQ9UF47 199 aa24.23■■□□□ 1.47
C19orf47-206ENST00000582006 RB1CC1Q8TDY2 1594 aa24.2■■□□□ 1.46
C19orf47-206ENST00000582006 NACADO15069 1562 aa23.98■■□□□ 1.43
C19orf47-206ENST00000582006 PABPN1Q86U42 306 aaKnown RBP eCLIP23.62■■□□□ 1.37
C19orf47-206ENST00000582006 MYO15BQ96JP2 1530 aa23.6■■□□□ 1.37
C19orf47-206ENST00000582006 UNC13AQ9UPW8 1703 aa23.58■■□□□ 1.37
C19orf47-206ENST00000582006 DCAF8L2P0C7V8 631 aa23.53■■□□□ 1.36
C19orf47-206ENST00000582006 BICRAQ9NZM4 1560 aa23.48■■□□□ 1.35
C19orf47-206ENST00000582006 SHROOM4Q9ULL8 1493 aa23.28■■□□□ 1.32
C19orf47-206ENST00000582006 DCAF1Q9Y4B6 1507 aa23.13■■□□□ 1.29
C19orf47-206ENST00000582006 ZCCHC6Q5VYS8 1495 aaKnown RBP23.06■■□□□ 1.28
C19orf47-206ENST00000582006 CECR2Q9BXF3 1484 aa23.05■■□□□ 1.28
C19orf47-206ENST00000582006 CC2D2AQ9P2K1 1620 aa23.05■■□□□ 1.28
C19orf47-206ENST00000582006 EIF4G1Q04637 1599 aaKnown RBP22.94■■□□□ 1.26
C19orf47-206ENST00000582006 SCRIBQ14160 1630 aa22.85■■□□□ 1.25
C19orf47-206ENST00000582006 DNAJC5Q9H3Z4 198 aa22.61■■□□□ 1.21
C19orf47-206ENST00000582006 CUX2O14529 1486 aa22.25■■□□□ 1.15
C19orf47-206ENST00000582006 NCAPD3P42695 1498 aa22.14■■□□□ 1.13
C19orf47-206ENST00000582006 ERCC6Q03468 1493 aa22.06■■□□□ 1.12
C19orf47-206ENST00000582006 ATAD2BQ9ULI0 1458 aa21.97■■□□□ 1.11
C19orf47-206ENST00000582006 HMGXB3Q12766 1538 aa21.94■■□□□ 1.1
C19orf47-206ENST00000582006 SMARCA2P51531 1590 aa21.91■■□□□ 1.1
C19orf47-206ENST00000582006 SMARCA4P51532 1647 aa21.84■■□□□ 1.09
C19orf47-206ENST00000582006 NESP48681 1621 aa21.77■■□□□ 1.08
C19orf47-206ENST00000582006 PEG3Q9GZU2 1588 aa21.72■■□□□ 1.07
C19orf47-206ENST00000582006 BAZ1BQ9UIG0 1483 aaKnown RBP21.71■■□□□ 1.07
C19orf47-206ENST00000582006 THOC2Q8NI27 1593 aaKnown RBP21.71■■□□□ 1.07
C19orf47-206ENST00000582006 BAZ1AQ9NRL2 1556 aaPredicted RBP21.71■■□□□ 1.07
C19orf47-206ENST00000582006 LAMC3Q9Y6N6 1575 aa21.69■■□□□ 1.06
C19orf47-206ENST00000582006 PDS5BQ9NTI5 1447 aa21.56■■□□□ 1.04
C19orf47-206ENST00000582006 KIF21AQ7Z4S6 1674 aa21.5■■□□□ 1.03
C19orf47-206ENST00000582006 MROH2BQ7Z745 1585 aa21.44■■□□□ 1.02
C19orf47-206ENST00000582006 CADPSQ9ULU8 1353 aa21.41■■□□□ 1.02
C19orf47-206ENST00000582006 MRC2Q9UBG0 1479 aa21.38■■□□□ 1.01
C19orf47-206ENST00000582006 WDR62O43379 1518 aa21.37■■□□□ 1.01
C19orf47-206ENST00000582006 TRIM41Q8WV44 630 aa21.32■■□□□ 1
C19orf47-206ENST00000582006 CEP164Q9UPV0 1460 aa21.2■□□□□ 0.98
C19orf47-206ENST00000582006 WIZO95785 1651 aa21.15■□□□□ 0.98
C19orf47-206ENST00000582006 FANCD2Q9BXW9 1451 aa21.13■□□□□ 0.97
C19orf47-206ENST00000582006 CFTRP13569 1480 aa21.1■□□□□ 0.97
C19orf47-206ENST00000582006 OSCARQ8IYS5 282 aa21.1■□□□□ 0.97
C19orf47-206ENST00000582006 URB2Q14146 1524 aaKnown RBP20.97■□□□□ 0.95
C19orf47-206ENST00000582006 TOP2AP11388 1531 aaKnown RBP20.93■□□□□ 0.94
C19orf47-206ENST00000582006 RSF1Q96T23 1441 aaPredicted RBP20.88■□□□□ 0.93
C19orf47-206ENST00000582006 RIMBP3CA6NJZ7 1639 aa20.85■□□□□ 0.93
C19orf47-206ENST00000582006 RIMBP3BA6NNM3 1639 aa20.85■□□□□ 0.93
C19orf47-206ENST00000582006 RIMBP3Q9UFD9 1639 aa20.85■□□□□ 0.93
C19orf47-206ENST00000582006 PRDM2Q13029 1718 aa20.84■□□□□ 0.93
C19orf47-206ENST00000582006 IFT140Q96RY7 1462 aa20.82■□□□□ 0.92
C19orf47-206ENST00000582006 ARHGEF11O15085 1522 aa20.77■□□□□ 0.92
C19orf47-206ENST00000582006 ZNF608Q9ULD9 1512 aaPredicted RBP20.75■□□□□ 0.91
C19orf47-206ENST00000582006 ABCC8Q09428 1581 aa20.71■□□□□ 0.91
C19orf47-206ENST00000582006 TOPBP1Q92547 1522 aa20.7■□□□□ 0.9
C19orf47-206ENST00000582006 EIF4G3O43432 1585 aaKnown RBP20.65■□□□□ 0.9
C19orf47-206ENST00000582006 CCDC88BA6NC98 1476 aa20.65■□□□□ 0.9
C19orf47-206ENST00000582006 DNMBPQ6XZF7 1577 aa20.61■□□□□ 0.89
C19orf47-206ENST00000582006 CYB5RLQ6IPT4 315 aa20.57■□□□□ 0.88
C19orf47-206ENST00000582006 TARBP1Q13395 1621 aaKnown RBP20.55■□□□□ 0.88
C19orf47-206ENST00000582006 CHD1O14646 1710 aa20.53■□□□□ 0.88
C19orf47-206ENST00000582006 ARAP1Q96P48 1450 aa20.53■□□□□ 0.88
C19orf47-206ENST00000582006 AQRO60306 1485 aaKnown RBP eCLIP20.5■□□□□ 0.871e-8■■■■■ 40.7
C19orf47-206ENST00000582006 POLA1P09884 1462 aaPredicted RBP20.47■□□□□ 0.87
C19orf47-206ENST00000582006 TRHP20396 242 aaPredicted RBP20.43■□□□□ 0.86
C19orf47-206ENST00000582006 WDR97A6NE52 1622 aa20.42■□□□□ 0.86
C19orf47-206ENST00000582006 FBLN2P98095 1184 aa20.38■□□□□ 0.85
C19orf47-206ENST00000582006 CLASP1Q7Z460 1538 aa20.37■□□□□ 0.85
C19orf47-206ENST00000582006 SOGA1O94964 1423 aa20.35■□□□□ 0.85
C19orf47-206ENST00000582006 RAD54L2Q9Y4B4 1467 aa20.33■□□□□ 0.85
C19orf47-206ENST00000582006 TDRD9Q8NDG6 1382 aaKnown RBP20.32■□□□□ 0.84
C19orf47-206ENST00000582006 SNAPC4Q5SXM2 1469 aa20.31■□□□□ 0.84
C19orf47-206ENST00000582006 MAGI1Q96QZ7 1491 aaPredicted RBP20.31■□□□□ 0.84
C19orf47-206ENST00000582006 SYNJ1O43426 1573 aa20.31■□□□□ 0.84
C19orf47-206ENST00000582006 FGD5Q6ZNL6 1462 aa20.26■□□□□ 0.83
C19orf47-206ENST00000582006 CHMP7Q8WUX9 453 aaPredicted RBP20.25■□□□□ 0.83
C19orf47-206ENST00000582006 GRIN2BQ13224 1484 aa20.24■□□□□ 0.83
C19orf47-206ENST00000582006 SYNJ2O15056 1496 aa20.24■□□□□ 0.83
C19orf47-206ENST00000582006 CUX1P39880 1505 aa20.17■□□□□ 0.82
C19orf47-206ENST00000582006 GAPVD1Q14C86 1478 aa20.14■□□□□ 0.81
C19orf47-206ENST00000582006 AEBP2Q6ZN18 517 aaPredicted RBP20.14■□□□□ 0.81
C19orf47-206ENST00000582006 PBRM1Q86U86 1689 aa20.1■□□□□ 0.81
C19orf47-206ENST00000582006 ABCA10Q8WWZ4 1543 aa20.07■□□□□ 0.8
C19orf47-206ENST00000582006 ABCA5Q8WWZ7 1642 aa20.05■□□□□ 0.8
C19orf47-206ENST00000582006 GRIN2AQ12879 1464 aa19.98■□□□□ 0.79
C19orf47-206ENST00000582006 NUP160Q12769 1436 aa19.96■□□□□ 0.79
C19orf47-206ENST00000582006 CEP170Q5SW79 1584 aa19.92■□□□□ 0.78
C19orf47-206ENST00000582006 ERCC6L2Q5T890 1561 aa19.92■□□□□ 0.78
C19orf47-206ENST00000582006 ADAMTS12P58397 1594 aa19.91■□□□□ 0.78
C19orf47-206ENST00000582006 SHROOM2Q13796 1616 aa19.91■□□□□ 0.78
C19orf47-206ENST00000582006 WRNQ14191 1432 aaPredicted RBP eCLIP19.89■□□□□ 0.77
C19orf47-206ENST00000582006 FHAD1B1AJZ9 1412 aa19.86■□□□□ 0.77
C19orf47-206ENST00000582006 ERICH3Q5RHP9 1530 aa19.81■□□□□ 0.76
C19orf47-206ENST00000582006 TOP2BQ02880 1626 aa19.8■□□□□ 0.76
C19orf47-206ENST00000582006 BIVM-ERCC5R4GMW8 1640 aa19.8■□□□□ 0.76
C19orf47-206ENST00000582006 KIF13AQ9H1H9 1805 aa19.79■□□□□ 0.76
C19orf47-206ENST00000582006 PRG4Q92954 1404 aaPredicted RBP19.73■□□□□ 0.75
C19orf47-206ENST00000582006 JPH4Q96JJ6 628 aa19.7■□□□□ 0.74
C19orf47-206ENST00000582006 ABCC10Q5T3U5 1492 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms