RNA–Protein interactions for RNA: ENST00000581886.5

MPDU1-222, Transcript of mannose-P-dolichol utilization defect 1, humanhuman

TSL 3

Gene MPDU1, Length 924 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MPDU1-222ENST00000581886 NISCHQ9Y2I1 1504 aa27.59■■■□□ 2.01
MPDU1-222ENST00000581886 ABCC9O60706 1549 aa24.9■■□□□ 1.58
MPDU1-222ENST00000581886 CCDC180Q9P1Z9 1646 aa24.73■■□□□ 1.55
MPDU1-222ENST00000581886 RB1CC1Q8TDY2 1594 aa23.63■■□□□ 1.37
MPDU1-222ENST00000581886 DNAJC5BQ9UF47 199 aa23.47■■□□□ 1.35
MPDU1-222ENST00000581886 NACADO15069 1562 aa23.46■■□□□ 1.35
MPDU1-222ENST00000581886 DCAF8L2P0C7V8 631 aa23.42■■□□□ 1.34
MPDU1-222ENST00000581886 PABPN1Q86U42 306 aaKnown RBP eCLIP23.21■■□□□ 1.31
MPDU1-222ENST00000581886 MYO15BQ96JP2 1530 aa23.12■■□□□ 1.29
MPDU1-222ENST00000581886 UNC13AQ9UPW8 1703 aa23.02■■□□□ 1.28
MPDU1-222ENST00000581886 BICRAQ9NZM4 1560 aa22.93■■□□□ 1.26
MPDU1-222ENST00000581886 ZCCHC6Q5VYS8 1495 aaKnown RBP22.83■■□□□ 1.25
MPDU1-222ENST00000581886 DCAF1Q9Y4B6 1507 aa22.78■■□□□ 1.24
MPDU1-222ENST00000581886 SHROOM4Q9ULL8 1493 aa22.63■■□□□ 1.21
MPDU1-222ENST00000581886 SCRIBQ14160 1630 aa22.56■■□□□ 1.2
MPDU1-222ENST00000581886 CC2D2AQ9P2K1 1620 aa22.45■■□□□ 1.18
MPDU1-222ENST00000581886 CECR2Q9BXF3 1484 aa22.44■■□□□ 1.18
MPDU1-222ENST00000581886 EIF4G1Q04637 1599 aaKnown RBP22.38■■□□□ 1.17
MPDU1-222ENST00000581886 NCAPD3P42695 1498 aa21.69■■□□□ 1.06
MPDU1-222ENST00000581886 DNAJC5Q9H3Z4 198 aa21.64■■□□□ 1.05
MPDU1-222ENST00000581886 ATAD2BQ9ULI0 1458 aa21.6■■□□□ 1.05
MPDU1-222ENST00000581886 SMARCA2P51531 1590 aa21.52■■□□□ 1.04
MPDU1-222ENST00000581886 ERCC6Q03468 1493 aa21.52■■□□□ 1.03
MPDU1-222ENST00000581886 SMARCA4P51532 1647 aa21.51■■□□□ 1.03
MPDU1-222ENST00000581886 CUX2O14529 1486 aa21.49■■□□□ 1.03
MPDU1-222ENST00000581886 HMGXB3Q12766 1538 aa21.47■■□□□ 1.03
MPDU1-222ENST00000581886 BAZ1AQ9NRL2 1556 aaPredicted RBP21.42■■□□□ 1.02
MPDU1-222ENST00000581886 BAZ1BQ9UIG0 1483 aaKnown RBP21.38■■□□□ 1.01
MPDU1-222ENST00000581886 NESP48681 1621 aa21.35■■□□□ 1.01
MPDU1-222ENST00000581886 PEG3Q9GZU2 1588 aa21.31■■□□□ 1
MPDU1-222ENST00000581886 MROH2BQ7Z745 1585 aa21.25■□□□□ 0.99
MPDU1-222ENST00000581886 LAMC3Q9Y6N6 1575 aa21.18■□□□□ 0.98
MPDU1-222ENST00000581886 PDS5BQ9NTI5 1447 aa21.11■□□□□ 0.97
MPDU1-222ENST00000581886 THOC2Q8NI27 1593 aaKnown RBP21.1■□□□□ 0.97
MPDU1-222ENST00000581886 CADPSQ9ULU8 1353 aa21.04■□□□□ 0.96
MPDU1-222ENST00000581886 KIF21AQ7Z4S6 1674 aa21.01■□□□□ 0.95
MPDU1-222ENST00000581886 WIZO95785 1651 aa20.96■□□□□ 0.95
MPDU1-222ENST00000581886 MRC2Q9UBG0 1479 aa20.9■□□□□ 0.94
MPDU1-222ENST00000581886 WDR62O43379 1518 aa20.83■□□□□ 0.92
MPDU1-222ENST00000581886 RSF1Q96T23 1441 aaPredicted RBP20.81■□□□□ 0.92
MPDU1-222ENST00000581886 CEP164Q9UPV0 1460 aa20.8■□□□□ 0.92
MPDU1-222ENST00000581886 FANCD2Q9BXW9 1451 aa20.77■□□□□ 0.92
MPDU1-222ENST00000581886 CFTRP13569 1480 aa20.75■□□□□ 0.91
MPDU1-222ENST00000581886 TOP2AP11388 1531 aaKnown RBP20.71■□□□□ 0.91
MPDU1-222ENST00000581886 TRIM41Q8WV44 630 aa20.65■□□□□ 0.9
MPDU1-222ENST00000581886 URB2Q14146 1524 aaKnown RBP20.59■□□□□ 0.89
MPDU1-222ENST00000581886 OSCARQ8IYS5 282 aa20.57■□□□□ 0.88
MPDU1-222ENST00000581886 CCDC88BA6NC98 1476 aa20.51■□□□□ 0.87
MPDU1-222ENST00000581886 PRDM2Q13029 1718 aa20.44■□□□□ 0.86
MPDU1-222ENST00000581886 IFT140Q96RY7 1462 aa20.4■□□□□ 0.86
MPDU1-222ENST00000581886 ZNF608Q9ULD9 1512 aaPredicted RBP20.37■□□□□ 0.85
MPDU1-222ENST00000581886 TOPBP1Q92547 1522 aa20.36■□□□□ 0.85
MPDU1-222ENST00000581886 ABCC8Q09428 1581 aa20.34■□□□□ 0.85
MPDU1-222ENST00000581886 DNMBPQ6XZF7 1577 aa20.26■□□□□ 0.83
MPDU1-222ENST00000581886 RIMBP3CA6NJZ7 1639 aa20.2■□□□□ 0.82
MPDU1-222ENST00000581886 RIMBP3BA6NNM3 1639 aa20.2■□□□□ 0.82
MPDU1-222ENST00000581886 RIMBP3Q9UFD9 1639 aa20.2■□□□□ 0.82
MPDU1-222ENST00000581886 EIF4G3O43432 1585 aaKnown RBP20.2■□□□□ 0.82
MPDU1-222ENST00000581886 AQRO60306 1485 aaKnown RBP eCLIP20.19■□□□□ 0.822e-6■■■■■ 43
MPDU1-222ENST00000581886 ARHGEF11O15085 1522 aa20.16■□□□□ 0.82
MPDU1-222ENST00000581886 TARBP1Q13395 1621 aaKnown RBP20.16■□□□□ 0.82
MPDU1-222ENST00000581886 POLA1P09884 1462 aaPredicted RBP20.15■□□□□ 0.82
MPDU1-222ENST00000581886 FBLN2P98095 1184 aa20.12■□□□□ 0.81
MPDU1-222ENST00000581886 SOGA1O94964 1423 aa20.1■□□□□ 0.81
MPDU1-222ENST00000581886 RAD54L2Q9Y4B4 1467 aa20.09■□□□□ 0.81
MPDU1-222ENST00000581886 CYB5RLQ6IPT4 315 aa20.08■□□□□ 0.81
MPDU1-222ENST00000581886 TDRD9Q8NDG6 1382 aaKnown RBP20.07■□□□□ 0.8
MPDU1-222ENST00000581886 CHD1O14646 1710 aa20.05■□□□□ 0.8
MPDU1-222ENST00000581886 FGD5Q6ZNL6 1462 aa20.01■□□□□ 0.79
MPDU1-222ENST00000581886 CUX1P39880 1505 aa19.97■□□□□ 0.79
MPDU1-222ENST00000581886 CHMP7Q8WUX9 453 aaPredicted RBP19.96■□□□□ 0.79
MPDU1-222ENST00000581886 SNAPC4Q5SXM2 1469 aa19.96■□□□□ 0.79
MPDU1-222ENST00000581886 WDR97A6NE52 1622 aa19.95■□□□□ 0.78
MPDU1-222ENST00000581886 ARAP1Q96P48 1450 aa19.95■□□□□ 0.78
MPDU1-222ENST00000581886 GRIN2BQ13224 1484 aa19.91■□□□□ 0.78
MPDU1-222ENST00000581886 MAGI1Q96QZ7 1491 aaPredicted RBP19.91■□□□□ 0.78
MPDU1-222ENST00000581886 TRHP20396 242 aaPredicted RBP19.89■□□□□ 0.77
MPDU1-222ENST00000581886 SUPT5HO00267 1087 aaKnown RBP19.87■□□□□ 0.77
MPDU1-222ENST00000581886 CLASP1Q7Z460 1538 aa19.86■□□□□ 0.77
MPDU1-222ENST00000581886 SYNJ1O43426 1573 aa19.85■□□□□ 0.77
MPDU1-222ENST00000581886 SYNJ2O15056 1496 aa19.85■□□□□ 0.77
MPDU1-222ENST00000581886 GAPVD1Q14C86 1478 aa19.82■□□□□ 0.76
MPDU1-222ENST00000581886 ABCA10Q8WWZ4 1543 aa19.78■□□□□ 0.76
MPDU1-222ENST00000581886 PBRM1Q86U86 1689 aa19.74■□□□□ 0.75
MPDU1-222ENST00000581886 WRNQ14191 1432 aaPredicted RBP eCLIP19.72■□□□□ 0.75
MPDU1-222ENST00000581886 ABCA5Q8WWZ7 1642 aa19.71■□□□□ 0.75
MPDU1-222ENST00000581886 GRIN2AQ12879 1464 aa19.64■□□□□ 0.73
MPDU1-222ENST00000581886 TOP2BQ02880 1626 aa19.62■□□□□ 0.73
MPDU1-222ENST00000581886 BIVM-ERCC5R4GMW8 1640 aa19.59■□□□□ 0.73
MPDU1-222ENST00000581886 FHAD1B1AJZ9 1412 aa19.59■□□□□ 0.73
MPDU1-222ENST00000581886 NUP160Q12769 1436 aa19.59■□□□□ 0.73
MPDU1-222ENST00000581886 ADAMTS12P58397 1594 aa19.57■□□□□ 0.72
MPDU1-222ENST00000581886 CEP170Q5SW79 1584 aa19.55■□□□□ 0.72
MPDU1-222ENST00000581886 ERCC6L2Q5T890 1561 aa19.54■□□□□ 0.72
MPDU1-222ENST00000581886 ERICH3Q5RHP9 1530 aa19.53■□□□□ 0.72
MPDU1-222ENST00000581886 SHROOM2Q13796 1616 aa19.46■□□□□ 0.71
MPDU1-222ENST00000581886 JPH4Q96JJ6 628 aa19.45■□□□□ 0.7
MPDU1-222ENST00000581886 PRG4Q92954 1404 aaPredicted RBP19.42■□□□□ 0.7
MPDU1-222ENST00000581886 AEBP2Q6ZN18 517 aaPredicted RBP19.39■□□□□ 0.69
MPDU1-222ENST00000581886 IGF1RP08069 1367 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms