RNA–Protein interactions for RNA: ENST00000581460.1

RAB11FIP4-207, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 4

Gene RAB11FIP4, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-207ENST00000581460 NISCHQ9Y2I1 1504 aa48.07■■■■■ 5.29
RAB11FIP4-207ENST00000581460 CCDC180Q9P1Z9 1646 aa42.97■■■■■ 4.47
RAB11FIP4-207ENST00000581460 ABCC9O60706 1549 aa42.81■■■■■ 4.44
RAB11FIP4-207ENST00000581460 RB1CC1Q8TDY2 1594 aa40.84■■■■■ 4.13
RAB11FIP4-207ENST00000581460 DCAF8L2P0C7V8 631 aa40.62■■■■■ 4.09
RAB11FIP4-207ENST00000581460 NACADO15069 1562 aa40.61■■■■■ 4.09
RAB11FIP4-207ENST00000581460 MYO15BQ96JP2 1530 aa40.11■■■■■ 4.01
RAB11FIP4-207ENST00000581460 PABPN1Q86U42 306 aaKnown RBP eCLIP39.93■■■■□ 3.98
RAB11FIP4-207ENST00000581460 ZCCHC6Q5VYS8 1495 aaKnown RBP39.89■■■■□ 3.98
RAB11FIP4-207ENST00000581460 DNAJC5BQ9UF47 199 aa39.86■■■■□ 3.97
RAB11FIP4-207ENST00000581460 UNC13AQ9UPW8 1703 aa39.78■■■■□ 3.96
RAB11FIP4-207ENST00000581460 DCAF1Q9Y4B6 1507 aa39.7■■■■□ 3.95
RAB11FIP4-207ENST00000581460 BICRAQ9NZM4 1560 aa39.55■■■■□ 3.92
RAB11FIP4-207ENST00000581460 SCRIBQ14160 1630 aa39.25■■■■□ 3.87
RAB11FIP4-207ENST00000581460 SHROOM4Q9ULL8 1493 aa39.12■■■■□ 3.85
RAB11FIP4-207ENST00000581460 CC2D2AQ9P2K1 1620 aa38.63■■■■□ 3.77
RAB11FIP4-207ENST00000581460 EIF4G1Q04637 1599 aaKnown RBP38.62■■■■□ 3.77
RAB11FIP4-207ENST00000581460 CECR2Q9BXF3 1484 aa38.54■■■■□ 3.76
RAB11FIP4-207ENST00000581460 NCAPD3P42695 1498 aa37.48■■■■□ 3.59
RAB11FIP4-207ENST00000581460 SMARCA4P51532 1647 aa37.43■■■■□ 3.58
RAB11FIP4-207ENST00000581460 ATAD2BQ9ULI0 1458 aa37.42■■■■□ 3.58
RAB11FIP4-207ENST00000581460 SMARCA2P51531 1590 aa37.35■■■■□ 3.57
RAB11FIP4-207ENST00000581460 BAZ1AQ9NRL2 1556 aaPredicted RBP37.32■■■■□ 3.56
RAB11FIP4-207ENST00000581460 HMGXB3Q12766 1538 aa37.23■■■■□ 3.55
RAB11FIP4-207ENST00000581460 BAZ1BQ9UIG0 1483 aaKnown RBP37.12■■■■□ 3.53
RAB11FIP4-207ENST00000581460 MROH2BQ7Z745 1585 aa37.03■■■■□ 3.52
RAB11FIP4-207ENST00000581460 PEG3Q9GZU2 1588 aa37.03■■■■□ 3.52
RAB11FIP4-207ENST00000581460 ERCC6Q03468 1493 aa37.01■■■■□ 3.51
RAB11FIP4-207ENST00000581460 NESP48681 1621 aa36.81■■■■□ 3.48
RAB11FIP4-207ENST00000581460 CUX2O14529 1486 aa36.78■■■■□ 3.48
RAB11FIP4-207ENST00000581460 LAMC3Q9Y6N6 1575 aa36.6■■■■□ 3.45
RAB11FIP4-207ENST00000581460 WIZO95785 1651 aa36.58■■■■□ 3.45
RAB11FIP4-207ENST00000581460 PDS5BQ9NTI5 1447 aa36.45■■■■□ 3.43
RAB11FIP4-207ENST00000581460 DNAJC5Q9H3Z4 198 aa36.45■■■■□ 3.43
RAB11FIP4-207ENST00000581460 CADPSQ9ULU8 1353 aa36.4■■■■□ 3.42
RAB11FIP4-207ENST00000581460 RSF1Q96T23 1441 aaPredicted RBP36.39■■■■□ 3.42
RAB11FIP4-207ENST00000581460 THOC2Q8NI27 1593 aaKnown RBP36.35■■■■□ 3.41
RAB11FIP4-207ENST00000581460 KIF21AQ7Z4S6 1674 aa36.3■■■■□ 3.4
RAB11FIP4-207ENST00000581460 TOP2AP11388 1531 aaKnown RBP36.18■■■■□ 3.38
RAB11FIP4-207ENST00000581460 MRC2Q9UBG0 1479 aa36.09■■■■□ 3.37
RAB11FIP4-207ENST00000581460 CEP164Q9UPV0 1460 aa36.02■■■■□ 3.36
RAB11FIP4-207ENST00000581460 CFTRP13569 1480 aa36.01■■■■□ 3.36
RAB11FIP4-207ENST00000581460 FANCD2Q9BXW9 1451 aa35.99■■■■□ 3.35
RAB11FIP4-207ENST00000581460 WDR62O43379 1518 aa35.94■■■■□ 3.34
RAB11FIP4-207ENST00000581460 CCDC88BA6NC98 1476 aa35.77■■■■□ 3.32
RAB11FIP4-207ENST00000581460 URB2Q14146 1524 aaKnown RBP35.63■■■■□ 3.29
RAB11FIP4-207ENST00000581460 PRDM2Q13029 1718 aa35.59■■■■□ 3.29
RAB11FIP4-207ENST00000581460 TOPBP1Q92547 1522 aa35.32■■■■□ 3.24
RAB11FIP4-207ENST00000581460 IFT140Q96RY7 1462 aa35.29■■■■□ 3.24
RAB11FIP4-207ENST00000581460 ABCC8Q09428 1581 aa35.28■■■■□ 3.24
RAB11FIP4-207ENST00000581460 DNMBPQ6XZF7 1577 aa35.21■■■■□ 3.23
RAB11FIP4-207ENST00000581460 OSCARQ8IYS5 282 aa35.2■■■■□ 3.23
RAB11FIP4-207ENST00000581460 ZNF608Q9ULD9 1512 aaPredicted RBP35.16■■■■□ 3.22
RAB11FIP4-207ENST00000581460 SUPT5HO00267 1087 aaKnown RBP35.1■■■■□ 3.21
RAB11FIP4-207ENST00000581460 TRIM41Q8WV44 630 aa35.07■■■■□ 3.2
RAB11FIP4-207ENST00000581460 POLA1P09884 1462 aaPredicted RBP34.97■■■■□ 3.19
RAB11FIP4-207ENST00000581460 EIF4G3O43432 1585 aaKnown RBP34.97■■■■□ 3.19
RAB11FIP4-207ENST00000581460 TARBP1Q13395 1621 aaKnown RBP34.92■■■■□ 3.18
RAB11FIP4-207ENST00000581460 AQRO60306 1485 aaKnown RBP eCLIP34.9■■■■□ 3.189e-7■■■■■ 32.8
RAB11FIP4-207ENST00000581460 SOGA1O94964 1423 aa34.86■■■■□ 3.17
RAB11FIP4-207ENST00000581460 RAD54L2Q9Y4B4 1467 aa34.84■■■■□ 3.17
RAB11FIP4-207ENST00000581460 FGD5Q6ZNL6 1462 aa34.81■■■■□ 3.16
RAB11FIP4-207ENST00000581460 CUX1P39880 1505 aa34.78■■■■□ 3.16
RAB11FIP4-207ENST00000581460 TDRD9Q8NDG6 1382 aaKnown RBP34.75■■■■□ 3.15
RAB11FIP4-207ENST00000581460 FBLN2P98095 1184 aa34.73■■■■□ 3.15
RAB11FIP4-207ENST00000581460 CHD1O14646 1710 aa34.63■■■■□ 3.13
RAB11FIP4-207ENST00000581460 WDR97A6NE52 1622 aa34.63■■■■□ 3.13
RAB11FIP4-207ENST00000581460 RIMBP3CA6NJZ7 1639 aa34.62■■■■□ 3.13
RAB11FIP4-207ENST00000581460 RIMBP3BA6NNM3 1639 aa34.62■■■■□ 3.13
RAB11FIP4-207ENST00000581460 RIMBP3Q9UFD9 1639 aa34.62■■■■□ 3.13
RAB11FIP4-207ENST00000581460 ARHGEF11O15085 1522 aa34.57■■■■□ 3.12
RAB11FIP4-207ENST00000581460 SNAPC4Q5SXM2 1469 aa34.57■■■■□ 3.12
RAB11FIP4-207ENST00000581460 GRIN2BQ13224 1484 aa34.52■■■■□ 3.12
RAB11FIP4-207ENST00000581460 CHMP7Q8WUX9 453 aaPredicted RBP34.5■■■■□ 3.11
RAB11FIP4-207ENST00000581460 MAGI1Q96QZ7 1491 aaPredicted RBP34.48■■■■□ 3.11
RAB11FIP4-207ENST00000581460 GAPVD1Q14C86 1478 aa34.43■■■■□ 3.1
RAB11FIP4-207ENST00000581460 ABCA10Q8WWZ4 1543 aa34.41■■■■□ 3.1
RAB11FIP4-207ENST00000581460 WRNQ14191 1432 aaPredicted RBP eCLIP34.38■■■■□ 3.09
RAB11FIP4-207ENST00000581460 CYB5RLQ6IPT4 315 aa34.37■■■■□ 3.09
RAB11FIP4-207ENST00000581460 SYNJ2O15056 1496 aa34.36■■■■□ 3.09
RAB11FIP4-207ENST00000581460 SYNJ1O43426 1573 aa34.32■■■■□ 3.09
RAB11FIP4-207ENST00000581460 PBRM1Q86U86 1689 aa34.32■■■■□ 3.08
RAB11FIP4-207ENST00000581460 TOP2BQ02880 1626 aa34.3■■■■□ 3.08
RAB11FIP4-207ENST00000581460 ABCA5Q8WWZ7 1642 aa34.29■■■■□ 3.08
RAB11FIP4-207ENST00000581460 BIVM-ERCC5R4GMW8 1640 aa34.26■■■■□ 3.08
RAB11FIP4-207ENST00000581460 CLASP1Q7Z460 1538 aa34.25■■■■□ 3.07
RAB11FIP4-207ENST00000581460 ARAP1Q96P48 1450 aa34.25■■■■□ 3.07
RAB11FIP4-207ENST00000581460 GRIN2AQ12879 1464 aa34.06■■■■□ 3.04
RAB11FIP4-207ENST00000581460 ADAMTS12P58397 1594 aa34.05■■■■□ 3.04
RAB11FIP4-207ENST00000581460 FHAD1B1AJZ9 1412 aa34.01■■■■□ 3.03
RAB11FIP4-207ENST00000581460 ERICH3Q5RHP9 1530 aa33.99■■■■□ 3.03
RAB11FIP4-207ENST00000581460 TRHP20396 242 aaPredicted RBP33.96■■■■□ 3.03
RAB11FIP4-207ENST00000581460 NUP160Q12769 1436 aa33.91■■■■□ 3.02
RAB11FIP4-207ENST00000581460 CEP170Q5SW79 1584 aa33.89■■■■□ 3.02
RAB11FIP4-207ENST00000581460 ERCC6L2Q5T890 1561 aa33.73■■■□□ 2.99
RAB11FIP4-207ENST00000581460 KIF27Q86VH2 1401 aa33.72■■■□□ 2.99
RAB11FIP4-207ENST00000581460 SHROOM2Q13796 1616 aa33.68■■■□□ 2.98
RAB11FIP4-207ENST00000581460 JPH4Q96JJ6 628 aa33.63■■■□□ 2.97
RAB11FIP4-207ENST00000581460 IGF1RP08069 1367 aa33.62■■■□□ 2.97
RAB11FIP4-207ENST00000581460 PRG4Q92954 1404 aaPredicted RBP33.62■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms