RNA–Protein interactions for RNA: ENST00000581404.1

ARC-202, Transcript of activity regulated cytoskeleton associated protein, humanhuman

TSL 3

Gene ARC, Length 407 nt, Biotype processed transcript, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARC-202ENST00000581404 NISCHQ9Y2I1 1504 aa33.75■■■□□ 2.99
ARC-202ENST00000581404 ABCC9O60706 1549 aa30.37■■■□□ 2.45
ARC-202ENST00000581404 CCDC180Q9P1Z9 1646 aa30.36■■■□□ 2.45
ARC-202ENST00000581404 RB1CC1Q8TDY2 1594 aa28.94■■■□□ 2.22
ARC-202ENST00000581404 NACADO15069 1562 aa28.74■■■□□ 2.19
ARC-202ENST00000581404 DNAJC5BQ9UF47 199 aa28.52■■■□□ 2.16
ARC-202ENST00000581404 DCAF8L2P0C7V8 631 aa28.4■■■□□ 2.14
ARC-202ENST00000581404 MYO15BQ96JP2 1530 aa28.36■■■□□ 2.13
ARC-202ENST00000581404 PABPN1Q86U42 306 aaKnown RBP eCLIP28.21■■■□□ 2.11
ARC-202ENST00000581404 UNC13AQ9UPW8 1703 aa28.18■■■□□ 2.1
ARC-202ENST00000581404 BICRAQ9NZM4 1560 aa28.06■■■□□ 2.08
ARC-202ENST00000581404 ZCCHC6Q5VYS8 1495 aaKnown RBP27.97■■■□□ 2.07
ARC-202ENST00000581404 DCAF1Q9Y4B6 1507 aa27.94■■■□□ 2.06
ARC-202ENST00000581404 SHROOM4Q9ULL8 1493 aa27.82■■■□□ 2.04
ARC-202ENST00000581404 SCRIBQ14160 1630 aa27.58■■■□□ 2.01
ARC-202ENST00000581404 CC2D2AQ9P2K1 1620 aa27.45■■□□□ 1.99
ARC-202ENST00000581404 CECR2Q9BXF3 1484 aa27.41■■□□□ 1.98
ARC-202ENST00000581404 EIF4G1Q04637 1599 aaKnown RBP27.39■■□□□ 1.98
ARC-202ENST00000581404 NCAPD3P42695 1498 aa26.53■■□□□ 1.84
ARC-202ENST00000581404 ATAD2BQ9ULI0 1458 aa26.4■■□□□ 1.82
ARC-202ENST00000581404 SMARCA2P51531 1590 aa26.36■■□□□ 1.81
ARC-202ENST00000581404 DNAJC5Q9H3Z4 198 aa26.34■■□□□ 1.81
ARC-202ENST00000581404 SMARCA4P51532 1647 aa26.34■■□□□ 1.81
ARC-202ENST00000581404 HMGXB3Q12766 1538 aa26.34■■□□□ 1.81
ARC-202ENST00000581404 CUX2O14529 1486 aa26.3■■□□□ 1.8
ARC-202ENST00000581404 ERCC6Q03468 1493 aa26.27■■□□□ 1.8
ARC-202ENST00000581404 BAZ1AQ9NRL2 1556 aaPredicted RBP26.23■■□□□ 1.79
ARC-202ENST00000581404 BAZ1BQ9UIG0 1483 aaKnown RBP26.15■■□□□ 1.78
ARC-202ENST00000581404 PEG3Q9GZU2 1588 aa26.14■■□□□ 1.78
ARC-202ENST00000581404 NESP48681 1621 aa26.04■■□□□ 1.76
ARC-202ENST00000581404 MROH2BQ7Z745 1585 aa25.96■■□□□ 1.75
ARC-202ENST00000581404 LAMC3Q9Y6N6 1575 aa25.94■■□□□ 1.74
ARC-202ENST00000581404 THOC2Q8NI27 1593 aaKnown RBP25.86■■□□□ 1.73
ARC-202ENST00000581404 PDS5BQ9NTI5 1447 aa25.8■■□□□ 1.72
ARC-202ENST00000581404 KIF21AQ7Z4S6 1674 aa25.71■■□□□ 1.71
ARC-202ENST00000581404 CADPSQ9ULU8 1353 aa25.69■■□□□ 1.7
ARC-202ENST00000581404 WIZO95785 1651 aa25.61■■□□□ 1.69
ARC-202ENST00000581404 MRC2Q9UBG0 1479 aa25.57■■□□□ 1.68
ARC-202ENST00000581404 WDR62O43379 1518 aa25.52■■□□□ 1.68
ARC-202ENST00000581404 CEP164Q9UPV0 1460 aa25.45■■□□□ 1.66
ARC-202ENST00000581404 RSF1Q96T23 1441 aaPredicted RBP25.41■■□□□ 1.66
ARC-202ENST00000581404 CFTRP13569 1480 aa25.4■■□□□ 1.66
ARC-202ENST00000581404 FANCD2Q9BXW9 1451 aa25.39■■□□□ 1.65
ARC-202ENST00000581404 TOP2AP11388 1531 aaKnown RBP25.37■■□□□ 1.65
ARC-202ENST00000581404 URB2Q14146 1524 aaKnown RBP25.17■■□□□ 1.62
ARC-202ENST00000581404 PRDM2Q13029 1718 aa25.09■■□□□ 1.61
ARC-202ENST00000581404 TRIM41Q8WV44 630 aa25.07■■□□□ 1.6
ARC-202ENST00000581404 CCDC88BA6NC98 1476 aa25.03■■□□□ 1.6
ARC-202ENST00000581404 OSCARQ8IYS5 282 aa25.03■■□□□ 1.6
ARC-202ENST00000581404 IFT140Q96RY7 1462 aa24.95■■□□□ 1.58
ARC-202ENST00000581404 ABCC8Q09428 1581 aa24.89■■□□□ 1.58
ARC-202ENST00000581404 TOPBP1Q92547 1522 aa24.89■■□□□ 1.57
ARC-202ENST00000581404 ZNF608Q9ULD9 1512 aaPredicted RBP24.85■■□□□ 1.57
ARC-202ENST00000581404 DNMBPQ6XZF7 1577 aa24.81■■□□□ 1.56
ARC-202ENST00000581404 EIF4G3O43432 1585 aaKnown RBP24.75■■□□□ 1.55
ARC-202ENST00000581404 RIMBP3CA6NJZ7 1639 aa24.69■■□□□ 1.54
ARC-202ENST00000581404 RIMBP3BA6NNM3 1639 aa24.69■■□□□ 1.54
ARC-202ENST00000581404 RIMBP3Q9UFD9 1639 aa24.69■■□□□ 1.54
ARC-202ENST00000581404 TARBP1Q13395 1621 aaKnown RBP24.68■■□□□ 1.54
ARC-202ENST00000581404 ARHGEF11O15085 1522 aa24.64■■□□□ 1.53
ARC-202ENST00000581404 POLA1P09884 1462 aaPredicted RBP24.64■■□□□ 1.53
ARC-202ENST00000581404 AQRO60306 1485 aaKnown RBP eCLIP24.61■■□□□ 1.53
ARC-202ENST00000581404 CHD1O14646 1710 aa24.53■■□□□ 1.52
ARC-202ENST00000581404 SOGA1O94964 1423 aa24.51■■□□□ 1.51
ARC-202ENST00000581404 WDR97A6NE52 1622 aa24.5■■□□□ 1.51
ARC-202ENST00000581404 RAD54L2Q9Y4B4 1467 aa24.49■■□□□ 1.51
ARC-202ENST00000581404 FGD5Q6ZNL6 1462 aa24.46■■□□□ 1.51
ARC-202ENST00000581404 TDRD9Q8NDG6 1382 aaKnown RBP24.44■■□□□ 1.5
ARC-202ENST00000581404 FBLN2P98095 1184 aa24.44■■□□□ 1.5
ARC-202ENST00000581404 CUX1P39880 1505 aa24.41■■□□□ 1.5
ARC-202ENST00000581404 CYB5RLQ6IPT4 315 aa24.41■■□□□ 1.5
ARC-202ENST00000581404 SNAPC4Q5SXM2 1469 aa24.38■■□□□ 1.49
ARC-202ENST00000581404 ARAP1Q96P48 1450 aa24.38■■□□□ 1.49
ARC-202ENST00000581404 MAGI1Q96QZ7 1491 aaPredicted RBP24.38■■□□□ 1.49
ARC-202ENST00000581404 GRIN2BQ13224 1484 aa24.34■■□□□ 1.49
ARC-202ENST00000581404 CLASP1Q7Z460 1538 aa24.31■■□□□ 1.48
ARC-202ENST00000581404 SYNJ1O43426 1573 aa24.29■■□□□ 1.48
ARC-202ENST00000581404 SYNJ2O15056 1496 aa24.28■■□□□ 1.48
ARC-202ENST00000581404 CHMP7Q8WUX9 453 aaPredicted RBP24.28■■□□□ 1.48
ARC-202ENST00000581404 GAPVD1Q14C86 1478 aa24.22■■□□□ 1.47
ARC-202ENST00000581404 ABCA10Q8WWZ4 1543 aa24.2■■□□□ 1.47
ARC-202ENST00000581404 PBRM1Q86U86 1689 aa24.18■■□□□ 1.46
ARC-202ENST00000581404 ABCA5Q8WWZ7 1642 aa24.17■■□□□ 1.46
ARC-202ENST00000581404 TRHP20396 242 aaPredicted RBP24.16■■□□□ 1.46
ARC-202ENST00000581404 SUPT5HO00267 1087 aaKnown RBP24.12■■□□□ 1.45
ARC-202ENST00000581404 WRNQ14191 1432 aaPredicted RBP eCLIP24.1■■□□□ 1.45
ARC-202ENST00000581404 TOP2BQ02880 1626 aa24.02■■□□□ 1.44
ARC-202ENST00000581404 GRIN2AQ12879 1464 aa24.02■■□□□ 1.44
ARC-202ENST00000581404 BIVM-ERCC5R4GMW8 1640 aa24.01■■□□□ 1.43
ARC-202ENST00000581404 ADAMTS12P58397 1594 aa23.99■■□□□ 1.43
ARC-202ENST00000581404 NUP160Q12769 1436 aa23.96■■□□□ 1.43
ARC-202ENST00000581404 FHAD1B1AJZ9 1412 aa23.93■■□□□ 1.42
ARC-202ENST00000581404 CEP170Q5SW79 1584 aa23.91■■□□□ 1.42
ARC-202ENST00000581404 ERICH3Q5RHP9 1530 aa23.91■■□□□ 1.42
ARC-202ENST00000581404 ERCC6L2Q5T890 1561 aa23.86■■□□□ 1.41
ARC-202ENST00000581404 SHROOM2Q13796 1616 aa23.85■■□□□ 1.41
ARC-202ENST00000581404 PRG4Q92954 1404 aaPredicted RBP23.7■■□□□ 1.38
ARC-202ENST00000581404 RUSC2Q8N2Y8 1516 aa23.67■■□□□ 1.38
ARC-202ENST00000581404 JPH4Q96JJ6 628 aa23.65■■□□□ 1.38
ARC-202ENST00000581404 KIF27Q86VH2 1401 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms