RNA–Protein interactions for RNA: ENST00000581386.5

TMEM199-208, Transcript of transmembrane protein 199, humanhuman

TSL 4

Gene TMEM199, Length 481 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM199-208ENST00000581386 NISCHQ9Y2I1 1504 aa49■■■■■ 5.43
TMEM199-208ENST00000581386 CCDC180Q9P1Z9 1646 aa43.48■■■■■ 4.55
TMEM199-208ENST00000581386 ABCC9O60706 1549 aa42.76■■■■■ 4.44
TMEM199-208ENST00000581386 DCAF8L2P0C7V8 631 aa41.03■■■■■ 4.16
TMEM199-208ENST00000581386 RB1CC1Q8TDY2 1594 aa41.02■■■■■ 4.16
TMEM199-208ENST00000581386 NACADO15069 1562 aa40.97■■■■■ 4.15
TMEM199-208ENST00000581386 ZCCHC6Q5VYS8 1495 aaKnown RBP40.77■■■■■ 4.12
TMEM199-208ENST00000581386 MYO15BQ96JP2 1530 aa40.72■■■■■ 4.11
TMEM199-208ENST00000581386 DCAF1Q9Y4B6 1507 aa40.52■■■■■ 4.08
TMEM199-208ENST00000581386 UNC13AQ9UPW8 1703 aa40.06■■■■■ 4
TMEM199-208ENST00000581386 PABPN1Q86U42 306 aaKnown RBP eCLIP40.03■■■■■ 4
TMEM199-208ENST00000581386 BICRAQ9NZM4 1560 aa39.87■■■■□ 3.97
TMEM199-208ENST00000581386 SCRIBQ14160 1630 aa39.73■■■■□ 3.95
TMEM199-208ENST00000581386 DNAJC5BQ9UF47 199 aa39.5■■■■□ 3.91
TMEM199-208ENST00000581386 SHROOM4Q9ULL8 1493 aa39.35■■■■□ 3.89
TMEM199-208ENST00000581386 EIF4G1Q04637 1599 aaKnown RBP38.78■■■■□ 3.8
TMEM199-208ENST00000581386 CC2D2AQ9P2K1 1620 aa38.64■■■■□ 3.78
TMEM199-208ENST00000581386 CECR2Q9BXF3 1484 aa38.43■■■■□ 3.74
TMEM199-208ENST00000581386 SMARCA4P51532 1647 aa37.99■■■■□ 3.67
TMEM199-208ENST00000581386 BAZ1AQ9NRL2 1556 aaPredicted RBP37.93■■■■□ 3.66
TMEM199-208ENST00000581386 NCAPD3P42695 1498 aa37.88■■■■□ 3.65
TMEM199-208ENST00000581386 ATAD2BQ9ULI0 1458 aa37.88■■■■□ 3.65
TMEM199-208ENST00000581386 MROH2BQ7Z745 1585 aa37.79■■■■□ 3.64
TMEM199-208ENST00000581386 SMARCA2P51531 1590 aa37.75■■■■□ 3.63
TMEM199-208ENST00000581386 PEG3Q9GZU2 1588 aa37.63■■■■□ 3.62
TMEM199-208ENST00000581386 HMGXB3Q12766 1538 aa37.61■■■■□ 3.61
TMEM199-208ENST00000581386 BAZ1BQ9UIG0 1483 aaKnown RBP37.51■■■■□ 3.59
TMEM199-208ENST00000581386 RSF1Q96T23 1441 aaPredicted RBP37.35■■■■□ 3.57
TMEM199-208ENST00000581386 WIZO95785 1651 aa37.32■■■■□ 3.57
TMEM199-208ENST00000581386 NESP48681 1621 aa37.01■■■■□ 3.52
TMEM199-208ENST00000581386 TOP2AP11388 1531 aaKnown RBP36.9■■■■□ 3.5
TMEM199-208ENST00000581386 LAMC3Q9Y6N6 1575 aa36.81■■■■□ 3.48
TMEM199-208ENST00000581386 ERCC6Q03468 1493 aa36.81■■■■□ 3.48
TMEM199-208ENST00000581386 CADPSQ9ULU8 1353 aa36.78■■■■□ 3.48
TMEM199-208ENST00000581386 PDS5BQ9NTI5 1447 aa36.61■■■■□ 3.45
TMEM199-208ENST00000581386 CCDC88BA6NC98 1476 aa36.55■■■■□ 3.44
TMEM199-208ENST00000581386 CFTRP13569 1480 aa36.52■■■■□ 3.44
TMEM199-208ENST00000581386 CUX2O14529 1486 aa36.48■■■■□ 3.43
TMEM199-208ENST00000581386 KIF21AQ7Z4S6 1674 aa36.45■■■■□ 3.43
TMEM199-208ENST00000581386 THOC2Q8NI27 1593 aaKnown RBP36.38■■■■□ 3.41
TMEM199-208ENST00000581386 SUPT5HO00267 1087 aaKnown RBP36.33■■■■□ 3.41
TMEM199-208ENST00000581386 FANCD2Q9BXW9 1451 aa36.31■■■■□ 3.4
TMEM199-208ENST00000581386 CEP164Q9UPV0 1460 aa36.24■■■■□ 3.39
TMEM199-208ENST00000581386 MRC2Q9UBG0 1479 aa36.23■■■■□ 3.39
TMEM199-208ENST00000581386 WDR62O43379 1518 aa36.1■■■■□ 3.37
TMEM199-208ENST00000581386 PRDM2Q13029 1718 aa36.05■■■■□ 3.36
TMEM199-208ENST00000581386 URB2Q14146 1524 aaKnown RBP35.98■■■■□ 3.35
TMEM199-208ENST00000581386 TOPBP1Q92547 1522 aa35.73■■■■□ 3.31
TMEM199-208ENST00000581386 ABCC8Q09428 1581 aa35.68■■■■□ 3.3
TMEM199-208ENST00000581386 DNMBPQ6XZF7 1577 aa35.64■■■■□ 3.3
TMEM199-208ENST00000581386 DNAJC5Q9H3Z4 198 aa35.59■■■■□ 3.29
TMEM199-208ENST00000581386 IFT140Q96RY7 1462 aa35.52■■■■□ 3.28
TMEM199-208ENST00000581386 CUX1P39880 1505 aa35.44■■■■□ 3.26
TMEM199-208ENST00000581386 POLA1P09884 1462 aaPredicted RBP35.42■■■■□ 3.26
TMEM199-208ENST00000581386 ZNF608Q9ULD9 1512 aaPredicted RBP35.42■■■■□ 3.26
TMEM199-208ENST00000581386 TARBP1Q13395 1621 aaKnown RBP35.33■■■■□ 3.25
TMEM199-208ENST00000581386 FGD5Q6ZNL6 1462 aa35.31■■■■□ 3.24
TMEM199-208ENST00000581386 RAD54L2Q9Y4B4 1467 aa35.31■■■■□ 3.24
TMEM199-208ENST00000581386 SOGA1O94964 1423 aa35.3■■■■□ 3.24
TMEM199-208ENST00000581386 AQRO60306 1485 aaKnown RBP eCLIP35.22■■■■□ 3.232e-6■■■■□ 25.7
TMEM199-208ENST00000581386 EIF4G3O43432 1585 aaKnown RBP35.17■■■■□ 3.22
TMEM199-208ENST00000581386 WRNQ14191 1432 aaPredicted RBP eCLIP35.15■■■■□ 3.22
TMEM199-208ENST00000581386 TDRD9Q8NDG6 1382 aaKnown RBP35.14■■■■□ 3.22
TMEM199-208ENST00000581386 SYNJ1O43426 1573 aa35.06■■■■□ 3.2
TMEM199-208ENST00000581386 TOP2BQ02880 1626 aa35.06■■■■□ 3.2
TMEM199-208ENST00000581386 OSCARQ8IYS5 282 aa35.03■■■■□ 3.2
TMEM199-208ENST00000581386 BIVM-ERCC5R4GMW8 1640 aa35.03■■■■□ 3.2
TMEM199-208ENST00000581386 ABCA10Q8WWZ4 1543 aa34.97■■■■□ 3.19
TMEM199-208ENST00000581386 WDR97A6NE52 1622 aa34.97■■■■□ 3.19
TMEM199-208ENST00000581386 GRIN2BQ13224 1484 aa34.86■■■■□ 3.17
TMEM199-208ENST00000581386 GAPVD1Q14C86 1478 aa34.86■■■■□ 3.17
TMEM199-208ENST00000581386 SNAPC4Q5SXM2 1469 aa34.83■■■■□ 3.17
TMEM199-208ENST00000581386 ABCA5Q8WWZ7 1642 aa34.8■■■■□ 3.16
TMEM199-208ENST00000581386 FBLN2P98095 1184 aa34.79■■■■□ 3.16
TMEM199-208ENST00000581386 MAGI1Q96QZ7 1491 aaPredicted RBP34.76■■■■□ 3.15
TMEM199-208ENST00000581386 CHD1O14646 1710 aa34.72■■■■□ 3.15
TMEM199-208ENST00000581386 PBRM1Q86U86 1689 aa34.69■■■■□ 3.14
TMEM199-208ENST00000581386 CHMP7Q8WUX9 453 aaPredicted RBP34.68■■■■□ 3.14
TMEM199-208ENST00000581386 SYNJ2O15056 1496 aa34.65■■■■□ 3.14
TMEM199-208ENST00000581386 ERICH3Q5RHP9 1530 aa34.52■■■■□ 3.12
TMEM199-208ENST00000581386 FHAD1B1AJZ9 1412 aa34.47■■■■□ 3.11
TMEM199-208ENST00000581386 ADAMTS12P58397 1594 aa34.46■■■■□ 3.11
TMEM199-208ENST00000581386 KIF27Q86VH2 1401 aa34.42■■■■□ 3.1
TMEM199-208ENST00000581386 CLASP1Q7Z460 1538 aa34.41■■■■□ 3.1
TMEM199-208ENST00000581386 GRIN2AQ12879 1464 aa34.41■■■■□ 3.1
TMEM199-208ENST00000581386 ARHGEF11O15085 1522 aa34.4■■■■□ 3.1
TMEM199-208ENST00000581386 IGF1RP08069 1367 aa34.39■■■■□ 3.1
TMEM199-208ENST00000581386 RIMBP3CA6NJZ7 1639 aa34.39■■■■□ 3.1
TMEM199-208ENST00000581386 RIMBP3BA6NNM3 1639 aa34.39■■■■□ 3.1
TMEM199-208ENST00000581386 RIMBP3Q9UFD9 1639 aa34.39■■■■□ 3.1
TMEM199-208ENST00000581386 TRIM41Q8WV44 630 aa34.33■■■■□ 3.09
TMEM199-208ENST00000581386 NUP160Q12769 1436 aa34.3■■■■□ 3.08
TMEM199-208ENST00000581386 CEP170Q5SW79 1584 aa34.24■■■■□ 3.07
TMEM199-208ENST00000581386 RUSC2Q8N2Y8 1516 aa34.16■■■■□ 3.06
TMEM199-208ENST00000581386 CYB5RLQ6IPT4 315 aa34.16■■■■□ 3.06
TMEM199-208ENST00000581386 ARAP1Q96P48 1450 aa34.14■■■■□ 3.06
TMEM199-208ENST00000581386 CARMIL1Q5VZK9 1371 aa34.13■■■■□ 3.05
TMEM199-208ENST00000581386 CUL7Q14999 1698 aa34.12■■■■□ 3.05
TMEM199-208ENST00000581386 JPH4Q96JJ6 628 aa33.99■■■■□ 3.03
TMEM199-208ENST00000581386 SHROOM2Q13796 1616 aa33.99■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms