RNA–Protein interactions for RNA: ENST00000581292.5

EPB41L3-223, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

TSL 4

Gene EPB41L3, Length 551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-223ENST00000581292 NISCHQ9Y2I1 1504 aa31.03■■■□□ 2.56
EPB41L3-223ENST00000581292 CCDC180Q9P1Z9 1646 aa27.59■■■□□ 2.01
EPB41L3-223ENST00000581292 ABCC9O60706 1549 aa27.12■■□□□ 1.93
EPB41L3-223ENST00000581292 DCAF8L2P0C7V8 631 aa26.12■■□□□ 1.77
EPB41L3-223ENST00000581292 RB1CC1Q8TDY2 1594 aa26.03■■□□□ 1.76
EPB41L3-223ENST00000581292 NACADO15069 1562 aa25.97■■□□□ 1.75
EPB41L3-223ENST00000581292 ZCCHC6Q5VYS8 1495 aaKnown RBP25.82■■□□□ 1.72
EPB41L3-223ENST00000581292 MYO15BQ96JP2 1530 aa25.75■■□□□ 1.71
EPB41L3-223ENST00000581292 DCAF1Q9Y4B6 1507 aa25.63■■□□□ 1.69
EPB41L3-223ENST00000581292 UNC13AQ9UPW8 1703 aa25.4■■□□□ 1.66
EPB41L3-223ENST00000581292 PABPN1Q86U42 306 aaKnown RBP eCLIP25.37■■□□□ 1.65
EPB41L3-223ENST00000581292 SCRIBQ14160 1630 aa25.23■■□□□ 1.63
EPB41L3-223ENST00000581292 BICRAQ9NZM4 1560 aa25.2■■□□□ 1.62
EPB41L3-223ENST00000581292 DNAJC5BQ9UF47 199 aa24.92■■□□□ 1.58
EPB41L3-223ENST00000581292 SHROOM4Q9ULL8 1493 aa24.91■■□□□ 1.58
EPB41L3-223ENST00000581292 EIF4G1Q04637 1599 aaKnown RBP24.57■■□□□ 1.52
EPB41L3-223ENST00000581292 CC2D2AQ9P2K1 1620 aa24.5■■□□□ 1.51
EPB41L3-223ENST00000581292 CECR2Q9BXF3 1484 aa24.35■■□□□ 1.49
EPB41L3-223ENST00000581292 SMARCA4P51532 1647 aa24.09■■□□□ 1.45
EPB41L3-223ENST00000581292 BAZ1AQ9NRL2 1556 aaPredicted RBP24.07■■□□□ 1.44
EPB41L3-223ENST00000581292 ATAD2BQ9ULI0 1458 aa23.98■■□□□ 1.43
EPB41L3-223ENST00000581292 NCAPD3P42695 1498 aa23.97■■□□□ 1.43
EPB41L3-223ENST00000581292 SMARCA2P51531 1590 aa23.95■■□□□ 1.42
EPB41L3-223ENST00000581292 MROH2BQ7Z745 1585 aa23.93■■□□□ 1.42
EPB41L3-223ENST00000581292 HMGXB3Q12766 1538 aa23.82■■□□□ 1.4
EPB41L3-223ENST00000581292 PEG3Q9GZU2 1588 aa23.82■■□□□ 1.4
EPB41L3-223ENST00000581292 BAZ1BQ9UIG0 1483 aaKnown RBP23.81■■□□□ 1.4
EPB41L3-223ENST00000581292 WIZO95785 1651 aa23.67■■□□□ 1.38
EPB41L3-223ENST00000581292 RSF1Q96T23 1441 aaPredicted RBP23.64■■□□□ 1.37
EPB41L3-223ENST00000581292 NESP48681 1621 aa23.43■■□□□ 1.34
EPB41L3-223ENST00000581292 TOP2AP11388 1531 aaKnown RBP23.4■■□□□ 1.34
EPB41L3-223ENST00000581292 ERCC6Q03468 1493 aa23.39■■□□□ 1.34
EPB41L3-223ENST00000581292 LAMC3Q9Y6N6 1575 aa23.35■■□□□ 1.33
EPB41L3-223ENST00000581292 CADPSQ9ULU8 1353 aa23.29■■□□□ 1.32
EPB41L3-223ENST00000581292 PDS5BQ9NTI5 1447 aa23.23■■□□□ 1.31
EPB41L3-223ENST00000581292 CCDC88BA6NC98 1476 aa23.16■■□□□ 1.3
EPB41L3-223ENST00000581292 KIF21AQ7Z4S6 1674 aa23.13■■□□□ 1.29
EPB41L3-223ENST00000581292 SUPT5HO00267 1087 aaKnown RBP23.12■■□□□ 1.29
EPB41L3-223ENST00000581292 CFTRP13569 1480 aa23.11■■□□□ 1.29
EPB41L3-223ENST00000581292 CUX2O14529 1486 aa23.11■■□□□ 1.29
EPB41L3-223ENST00000581292 THOC2Q8NI27 1593 aaKnown RBP23.04■■□□□ 1.28
EPB41L3-223ENST00000581292 FANCD2Q9BXW9 1451 aa23.03■■□□□ 1.28
EPB41L3-223ENST00000581292 CEP164Q9UPV0 1460 aa23.01■■□□□ 1.27
EPB41L3-223ENST00000581292 MRC2Q9UBG0 1479 aa22.97■■□□□ 1.27
EPB41L3-223ENST00000581292 PRDM2Q13029 1718 aa22.91■■□□□ 1.26
EPB41L3-223ENST00000581292 WDR62O43379 1518 aa22.87■■□□□ 1.25
EPB41L3-223ENST00000581292 URB2Q14146 1524 aaKnown RBP22.77■■□□□ 1.24
EPB41L3-223ENST00000581292 ABCC8Q09428 1581 aa22.65■■□□□ 1.22
EPB41L3-223ENST00000581292 TOPBP1Q92547 1522 aa22.64■■□□□ 1.21
EPB41L3-223ENST00000581292 DNMBPQ6XZF7 1577 aa22.6■■□□□ 1.21
EPB41L3-223ENST00000581292 IFT140Q96RY7 1462 aa22.52■■□□□ 1.2
EPB41L3-223ENST00000581292 DNAJC5Q9H3Z4 198 aa22.48■■□□□ 1.19
EPB41L3-223ENST00000581292 POLA1P09884 1462 aaPredicted RBP22.44■■□□□ 1.18
EPB41L3-223ENST00000581292 CUX1P39880 1505 aa22.44■■□□□ 1.18
EPB41L3-223ENST00000581292 ZNF608Q9ULD9 1512 aaPredicted RBP22.41■■□□□ 1.18
EPB41L3-223ENST00000581292 FGD5Q6ZNL6 1462 aa22.4■■□□□ 1.18
EPB41L3-223ENST00000581292 SOGA1O94964 1423 aa22.4■■□□□ 1.18
EPB41L3-223ENST00000581292 TARBP1Q13395 1621 aaKnown RBP22.38■■□□□ 1.17
EPB41L3-223ENST00000581292 RAD54L2Q9Y4B4 1467 aa22.37■■□□□ 1.17
EPB41L3-223ENST00000581292 AQRO60306 1485 aaKnown RBP eCLIP22.32■■□□□ 1.16
EPB41L3-223ENST00000581292 EIF4G3O43432 1585 aaKnown RBP22.32■■□□□ 1.16
EPB41L3-223ENST00000581292 WRNQ14191 1432 aaPredicted RBP eCLIP22.31■■□□□ 1.16
EPB41L3-223ENST00000581292 TDRD9Q8NDG6 1382 aaKnown RBP22.28■■□□□ 1.16
EPB41L3-223ENST00000581292 TOP2BQ02880 1626 aa22.24■■□□□ 1.15
EPB41L3-223ENST00000581292 SYNJ1O43426 1573 aa22.23■■□□□ 1.15
EPB41L3-223ENST00000581292 BIVM-ERCC5R4GMW8 1640 aa22.23■■□□□ 1.15
EPB41L3-223ENST00000581292 OSCARQ8IYS5 282 aa22.21■■□□□ 1.15
EPB41L3-223ENST00000581292 WDR97A6NE52 1622 aa22.17■■□□□ 1.14
EPB41L3-223ENST00000581292 ABCA10Q8WWZ4 1543 aa22.16■■□□□ 1.14
EPB41L3-223ENST00000581292 FBLN2P98095 1184 aa22.14■■□□□ 1.13
EPB41L3-223ENST00000581292 GRIN2BQ13224 1484 aa22.11■■□□□ 1.13
EPB41L3-223ENST00000581292 GAPVD1Q14C86 1478 aa22.11■■□□□ 1.13
EPB41L3-223ENST00000581292 SNAPC4Q5SXM2 1469 aa22.09■■□□□ 1.13
EPB41L3-223ENST00000581292 ABCA5Q8WWZ7 1642 aa22.06■■□□□ 1.12
EPB41L3-223ENST00000581292 PBRM1Q86U86 1689 aa22.04■■□□□ 1.12
EPB41L3-223ENST00000581292 MAGI1Q96QZ7 1491 aaPredicted RBP22.04■■□□□ 1.12
EPB41L3-223ENST00000581292 CHD1O14646 1710 aa22.04■■□□□ 1.12
EPB41L3-223ENST00000581292 CHMP7Q8WUX9 453 aaPredicted RBP22.03■■□□□ 1.12
EPB41L3-223ENST00000581292 SYNJ2O15056 1496 aa21.96■■□□□ 1.11
EPB41L3-223ENST00000581292 ERICH3Q5RHP9 1530 aa21.89■■□□□ 1.09
EPB41L3-223ENST00000581292 KIF27Q86VH2 1401 aa21.86■■□□□ 1.09
EPB41L3-223ENST00000581292 ADAMTS12P58397 1594 aa21.86■■□□□ 1.09
EPB41L3-223ENST00000581292 FHAD1B1AJZ9 1412 aa21.85■■□□□ 1.09
EPB41L3-223ENST00000581292 TRIM41Q8WV44 630 aa21.83■■□□□ 1.09
EPB41L3-223ENST00000581292 GRIN2AQ12879 1464 aa21.82■■□□□ 1.08
EPB41L3-223ENST00000581292 RIMBP3CA6NJZ7 1639 aa21.8■■□□□ 1.08
EPB41L3-223ENST00000581292 RIMBP3BA6NNM3 1639 aa21.8■■□□□ 1.08
EPB41L3-223ENST00000581292 RIMBP3Q9UFD9 1639 aa21.8■■□□□ 1.08
EPB41L3-223ENST00000581292 ARHGEF11O15085 1522 aa21.79■■□□□ 1.08
EPB41L3-223ENST00000581292 CLASP1Q7Z460 1538 aa21.79■■□□□ 1.08
EPB41L3-223ENST00000581292 IGF1RP08069 1367 aa21.76■■□□□ 1.07
EPB41L3-223ENST00000581292 CEP170Q5SW79 1584 aa21.7■■□□□ 1.06
EPB41L3-223ENST00000581292 NUP160Q12769 1436 aa21.7■■□□□ 1.06
EPB41L3-223ENST00000581292 CUL7Q14999 1698 aa21.69■■□□□ 1.06
EPB41L3-223ENST00000581292 CYB5RLQ6IPT4 315 aa21.67■■□□□ 1.06
EPB41L3-223ENST00000581292 CARMIL1Q5VZK9 1371 aa21.65■■□□□ 1.06
EPB41L3-223ENST00000581292 RUSC2Q8N2Y8 1516 aa21.65■■□□□ 1.06
EPB41L3-223ENST00000581292 ARAP1Q96P48 1450 aa21.6■■□□□ 1.05
EPB41L3-223ENST00000581292 JPH4Q96JJ6 628 aa21.55■■□□□ 1.04
EPB41L3-223ENST00000581292 SHROOM2Q13796 1616 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms