RNA–Protein interactions for RNA: ENST00000581280.1

RAB11FIP4-206, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-206ENST00000581280 NISCHQ9Y2I1 1504 aa49.61■■■■■ 5.53
RAB11FIP4-206ENST00000581280 ABCC9O60706 1549 aa44.45■■■■■ 4.71
RAB11FIP4-206ENST00000581280 CCDC180Q9P1Z9 1646 aa44.42■■■■■ 4.7
RAB11FIP4-206ENST00000581280 RB1CC1Q8TDY2 1594 aa42.29■■■■■ 4.36
RAB11FIP4-206ENST00000581280 NACADO15069 1562 aa42■■■■■ 4.31
RAB11FIP4-206ENST00000581280 DCAF8L2P0C7V8 631 aa41.85■■■■■ 4.29
RAB11FIP4-206ENST00000581280 DNAJC5BQ9UF47 199 aa41.71■■■■■ 4.27
RAB11FIP4-206ENST00000581280 PABPN1Q86U42 306 aaKnown RBP eCLIP41.4■■■■■ 4.22
RAB11FIP4-206ENST00000581280 MYO15BQ96JP2 1530 aa41.39■■■■■ 4.22
RAB11FIP4-206ENST00000581280 UNC13AQ9UPW8 1703 aa41.37■■■■■ 4.21
RAB11FIP4-206ENST00000581280 ZCCHC6Q5VYS8 1495 aaKnown RBP41.18■■■■■ 4.18
RAB11FIP4-206ENST00000581280 BICRAQ9NZM4 1560 aa41.06■■■■■ 4.16
RAB11FIP4-206ENST00000581280 DCAF1Q9Y4B6 1507 aa40.93■■■■■ 4.14
RAB11FIP4-206ENST00000581280 SCRIBQ14160 1630 aa40.5■■■■■ 4.07
RAB11FIP4-206ENST00000581280 SHROOM4Q9ULL8 1493 aa40.48■■■■■ 4.07
RAB11FIP4-206ENST00000581280 CC2D2AQ9P2K1 1620 aa40.16■■■■■ 4.02
RAB11FIP4-206ENST00000581280 EIF4G1Q04637 1599 aaKnown RBP40.06■■■■■ 4
RAB11FIP4-206ENST00000581280 CECR2Q9BXF3 1484 aa40.04■■■■■ 4
RAB11FIP4-206ENST00000581280 NCAPD3P42695 1498 aa38.77■■■■□ 3.8
RAB11FIP4-206ENST00000581280 ATAD2BQ9ULI0 1458 aa38.66■■■■□ 3.78
RAB11FIP4-206ENST00000581280 SMARCA4P51532 1647 aa38.63■■■■□ 3.77
RAB11FIP4-206ENST00000581280 SMARCA2P51531 1590 aa38.55■■■■□ 3.76
RAB11FIP4-206ENST00000581280 HMGXB3Q12766 1538 aa38.48■■■■□ 3.75
RAB11FIP4-206ENST00000581280 BAZ1AQ9NRL2 1556 aaPredicted RBP38.42■■■■□ 3.74
RAB11FIP4-206ENST00000581280 ERCC6Q03468 1493 aa38.39■■■■□ 3.74
RAB11FIP4-206ENST00000581280 DNAJC5Q9H3Z4 198 aa38.3■■■■□ 3.72
RAB11FIP4-206ENST00000581280 CUX2O14529 1486 aa38.29■■■■□ 3.72
RAB11FIP4-206ENST00000581280 BAZ1BQ9UIG0 1483 aaKnown RBP38.29■■■■□ 3.72
RAB11FIP4-206ENST00000581280 MROH2BQ7Z745 1585 aa38.29■■■■□ 3.72
RAB11FIP4-206ENST00000581280 PEG3Q9GZU2 1588 aa38.23■■■■□ 3.71
RAB11FIP4-206ENST00000581280 NESP48681 1621 aa38.19■■■■□ 3.7
RAB11FIP4-206ENST00000581280 LAMC3Q9Y6N6 1575 aa37.9■■■■□ 3.66
RAB11FIP4-206ENST00000581280 THOC2Q8NI27 1593 aaKnown RBP37.79■■■■□ 3.64
RAB11FIP4-206ENST00000581280 WIZO95785 1651 aa37.78■■■■□ 3.64
RAB11FIP4-206ENST00000581280 RSF1Q96T23 1441 aaPredicted RBP37.71■■■■□ 3.63
RAB11FIP4-206ENST00000581280 KIF21AQ7Z4S6 1674 aa37.7■■■■□ 3.63
RAB11FIP4-206ENST00000581280 PDS5BQ9NTI5 1447 aa37.69■■■■□ 3.62
RAB11FIP4-206ENST00000581280 CADPSQ9ULU8 1353 aa37.6■■■■□ 3.61
RAB11FIP4-206ENST00000581280 MRC2Q9UBG0 1479 aa37.36■■■■□ 3.57
RAB11FIP4-206ENST00000581280 TOP2AP11388 1531 aaKnown RBP37.29■■■■□ 3.56
RAB11FIP4-206ENST00000581280 WDR62O43379 1518 aa37.26■■■■□ 3.56
RAB11FIP4-206ENST00000581280 CEP164Q9UPV0 1460 aa37.21■■■■□ 3.55
RAB11FIP4-206ENST00000581280 FANCD2Q9BXW9 1451 aa37.17■■■■□ 3.54
RAB11FIP4-206ENST00000581280 CFTRP13569 1480 aa37.16■■■■□ 3.54
RAB11FIP4-206ENST00000581280 CCDC88BA6NC98 1476 aa37■■■■□ 3.51
RAB11FIP4-206ENST00000581280 URB2Q14146 1524 aaKnown RBP36.87■■■■□ 3.49
RAB11FIP4-206ENST00000581280 PRDM2Q13029 1718 aa36.82■■■■□ 3.48
RAB11FIP4-206ENST00000581280 TRIM41Q8WV44 630 aa36.65■■■■□ 3.46
RAB11FIP4-206ENST00000581280 OSCARQ8IYS5 282 aa36.57■■■■□ 3.44
RAB11FIP4-206ENST00000581280 TOPBP1Q92547 1522 aa36.48■■■■□ 3.43
RAB11FIP4-206ENST00000581280 SUPT5HO00267 1087 aaKnown RBP36.47■■■■□ 3.43
RAB11FIP4-206ENST00000581280 IFT140Q96RY7 1462 aa36.47■■■■□ 3.43
RAB11FIP4-206ENST00000581280 ZNF608Q9ULD9 1512 aaPredicted RBP36.43■■■■□ 3.42
RAB11FIP4-206ENST00000581280 ABCC8Q09428 1581 aa36.38■■■■□ 3.41
RAB11FIP4-206ENST00000581280 DNMBPQ6XZF7 1577 aa36.34■■■■□ 3.41
RAB11FIP4-206ENST00000581280 EIF4G3O43432 1585 aaKnown RBP36.22■■■■□ 3.39
RAB11FIP4-206ENST00000581280 TARBP1Q13395 1621 aaKnown RBP36.15■■■■□ 3.38
RAB11FIP4-206ENST00000581280 AQRO60306 1485 aaKnown RBP eCLIP36.1■■■■□ 3.37
RAB11FIP4-206ENST00000581280 POLA1P09884 1462 aaPredicted RBP36.1■■■■□ 3.37
RAB11FIP4-206ENST00000581280 RIMBP3CA6NJZ7 1639 aa36.09■■■■□ 3.37
RAB11FIP4-206ENST00000581280 RIMBP3BA6NNM3 1639 aa36.09■■■■□ 3.37
RAB11FIP4-206ENST00000581280 RIMBP3Q9UFD9 1639 aa36.09■■■■□ 3.37
RAB11FIP4-206ENST00000581280 RAD54L2Q9Y4B4 1467 aa35.98■■■■□ 3.35
RAB11FIP4-206ENST00000581280 CHD1O14646 1710 aa35.97■■■■□ 3.35
RAB11FIP4-206ENST00000581280 ARHGEF11O15085 1522 aa35.97■■■■□ 3.35
RAB11FIP4-206ENST00000581280 SOGA1O94964 1423 aa35.94■■■■□ 3.34
RAB11FIP4-206ENST00000581280 CUX1P39880 1505 aa35.93■■■■□ 3.34
RAB11FIP4-206ENST00000581280 FBLN2P98095 1184 aa35.89■■■■□ 3.34
RAB11FIP4-206ENST00000581280 TDRD9Q8NDG6 1382 aaKnown RBP35.88■■■■□ 3.33
RAB11FIP4-206ENST00000581280 FGD5Q6ZNL6 1462 aa35.87■■■■□ 3.33
RAB11FIP4-206ENST00000581280 WDR97A6NE52 1622 aa35.75■■■■□ 3.31
RAB11FIP4-206ENST00000581280 CYB5RLQ6IPT4 315 aa35.73■■■■□ 3.31
RAB11FIP4-206ENST00000581280 SNAPC4Q5SXM2 1469 aa35.72■■■■□ 3.31
RAB11FIP4-206ENST00000581280 GRIN2BQ13224 1484 aa35.62■■■■□ 3.29
RAB11FIP4-206ENST00000581280 MAGI1Q96QZ7 1491 aaPredicted RBP35.62■■■■□ 3.29
RAB11FIP4-206ENST00000581280 ARAP1Q96P48 1450 aa35.61■■■■□ 3.29
RAB11FIP4-206ENST00000581280 CHMP7Q8WUX9 453 aaPredicted RBP35.61■■■■□ 3.29
RAB11FIP4-206ENST00000581280 CLASP1Q7Z460 1538 aa35.52■■■■□ 3.28
RAB11FIP4-206ENST00000581280 SYNJ1O43426 1573 aa35.52■■■■□ 3.28
RAB11FIP4-206ENST00000581280 PBRM1Q86U86 1689 aa35.5■■■■□ 3.27
RAB11FIP4-206ENST00000581280 SYNJ2O15056 1496 aa35.5■■■■□ 3.27
RAB11FIP4-206ENST00000581280 GAPVD1Q14C86 1478 aa35.5■■■■□ 3.27
RAB11FIP4-206ENST00000581280 WRNQ14191 1432 aaPredicted RBP eCLIP35.49■■■■□ 3.27
RAB11FIP4-206ENST00000581280 ABCA10Q8WWZ4 1543 aa35.46■■■■□ 3.27
RAB11FIP4-206ENST00000581280 ABCA5Q8WWZ7 1642 aa35.41■■■■□ 3.26
RAB11FIP4-206ENST00000581280 TOP2BQ02880 1626 aa35.37■■■■□ 3.25
RAB11FIP4-206ENST00000581280 TRHP20396 242 aaPredicted RBP35.35■■■■□ 3.25
RAB11FIP4-206ENST00000581280 BIVM-ERCC5R4GMW8 1640 aa35.32■■■■□ 3.25
RAB11FIP4-206ENST00000581280 GRIN2AQ12879 1464 aa35.16■■■■□ 3.22
RAB11FIP4-206ENST00000581280 ADAMTS12P58397 1594 aa35.14■■■■□ 3.22
RAB11FIP4-206ENST00000581280 FHAD1B1AJZ9 1412 aa35.05■■■■□ 3.2
RAB11FIP4-206ENST00000581280 CEP170Q5SW79 1584 aa35.04■■■■□ 3.2
RAB11FIP4-206ENST00000581280 NUP160Q12769 1436 aa35.04■■■■□ 3.2
RAB11FIP4-206ENST00000581280 ERICH3Q5RHP9 1530 aa35.01■■■■□ 3.2
RAB11FIP4-206ENST00000581280 ERCC6L2Q5T890 1561 aa35■■■■□ 3.19
RAB11FIP4-206ENST00000581280 SHROOM2Q13796 1616 aa34.89■■■■□ 3.18
RAB11FIP4-206ENST00000581280 IGF1RP08069 1367 aa34.84■■■■□ 3.17
RAB11FIP4-206ENST00000581280 KIF27Q86VH2 1401 aa34.76■■■■□ 3.16
RAB11FIP4-206ENST00000581280 PRG4Q92954 1404 aaPredicted RBP34.72■■■■□ 3.15
RAB11FIP4-206ENST00000581280 JPH4Q96JJ6 628 aa34.7■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms