RNA–Protein interactions for RNA: ENST00000581276.5

GDPD1-206, Transcript of glycerophosphodiester phosphodiesterase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GDPD1, Length 1,055 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD1-206ENST00000581276 AEBP2Q6ZN18 517 aaPredicted RBP26.45■■□□□ 1.82
GDPD1-206ENST00000581276 NISCHQ9Y2I1 1504 aa25.78■■□□□ 1.72
GDPD1-206ENST00000581276 CHIC1Q5VXU3 224 aa25.09■■□□□ 1.61
GDPD1-206ENST00000581276 ABCC9O60706 1549 aa23.65■■□□□ 1.38
GDPD1-206ENST00000581276 CCDC180Q9P1Z9 1646 aa23.3■■□□□ 1.32
GDPD1-206ENST00000581276 DNAJC5BQ9UF47 199 aa22.54■■□□□ 1.2
GDPD1-206ENST00000581276 SENP3Q9H4L4 574 aaPredicted RBP22.46■■□□□ 1.19
GDPD1-206ENST00000581276 RB1CC1Q8TDY2 1594 aa22.37■■□□□ 1.17
GDPD1-206ENST00000581276 PHF23Q9BUL5 403 aaPredicted RBP22.18■■□□□ 1.14
GDPD1-206ENST00000581276 NACADO15069 1562 aa22.12■■□□□ 1.13
GDPD1-206ENST00000581276 PABPN1Q86U42 306 aaKnown RBP eCLIP21.96■■□□□ 1.11
GDPD1-206ENST00000581276 DCAF8L2P0C7V8 631 aa21.91■■□□□ 1.1
GDPD1-206ENST00000581276 UNC13AQ9UPW8 1703 aa21.87■■□□□ 1.09
GDPD1-206ENST00000581276 BICRAQ9NZM4 1560 aa21.72■■□□□ 1.07
GDPD1-206ENST00000581276 MYO15BQ96JP2 1530 aa21.71■■□□□ 1.07
GDPD1-206ENST00000581276 SHROOM4Q9ULL8 1493 aa21.41■■□□□ 1.02
GDPD1-206ENST00000581276 CC2D2AQ9P2K1 1620 aa21.37■■□□□ 1.01
GDPD1-206ENST00000581276 CECR2Q9BXF3 1484 aa21.35■■□□□ 1.01
GDPD1-206ENST00000581276 DCAF1Q9Y4B6 1507 aa21.29■■□□□ 1
GDPD1-206ENST00000581276 ZCCHC6Q5VYS8 1495 aaKnown RBP21.26■□□□□ 0.99
GDPD1-206ENST00000581276 EIF4G1Q04637 1599 aaKnown RBP21.23■□□□□ 0.99
GDPD1-206ENST00000581276 SCRIBQ14160 1630 aa21.18■□□□□ 0.98
GDPD1-206ENST00000581276 DNAJC5Q9H3Z4 198 aa21■□□□□ 0.95
GDPD1-206ENST00000581276 FOXD1Q16676 465 aa20.98■□□□□ 0.95
GDPD1-206ENST00000581276 CUX2O14529 1486 aa20.56■□□□□ 0.88
GDPD1-206ENST00000581276 ERCC6Q03468 1493 aa20.45■□□□□ 0.86
GDPD1-206ENST00000581276 NCAPD3P42695 1498 aa20.43■□□□□ 0.86
GDPD1-206ENST00000581276 ATAD2BQ9ULI0 1458 aa20.3■□□□□ 0.84
GDPD1-206ENST00000581276 HMGXB3Q12766 1538 aa20.23■□□□□ 0.83
GDPD1-206ENST00000581276 SMARCA2P51531 1590 aa20.23■□□□□ 0.83
GDPD1-206ENST00000581276 NESP48681 1621 aa20.2■□□□□ 0.82
GDPD1-206ENST00000581276 SMARCA4P51532 1647 aa20.18■□□□□ 0.82
GDPD1-206ENST00000581276 THOC2Q8NI27 1593 aaKnown RBP20.08■□□□□ 0.81
GDPD1-206ENST00000581276 BAZ1BQ9UIG0 1483 aaKnown RBP20.08■□□□□ 0.81
GDPD1-206ENST00000581276 BAZ1AQ9NRL2 1556 aaPredicted RBP20.04■□□□□ 0.8
GDPD1-206ENST00000581276 LAMC3Q9Y6N6 1575 aa20.04■□□□□ 0.8
GDPD1-206ENST00000581276 PEG3Q9GZU2 1588 aa20.01■□□□□ 0.79
GDPD1-206ENST00000581276 PLPPR3Q6T4P5 718 aa19.97■□□□□ 0.79
GDPD1-206ENST00000581276 KIF21AQ7Z4S6 1674 aa19.94■□□□□ 0.78
GDPD1-206ENST00000581276 PDS5BQ9NTI5 1447 aa19.93■□□□□ 0.78
GDPD1-206ENST00000581276 TRIM41Q8WV44 630 aa19.89■□□□□ 0.77
GDPD1-206ENST00000581276 MROH2BQ7Z745 1585 aa19.85■□□□□ 0.77
GDPD1-206ENST00000581276 CADPSQ9ULU8 1353 aa19.79■□□□□ 0.76
GDPD1-206ENST00000581276 MRC2Q9UBG0 1479 aa19.76■□□□□ 0.75
GDPD1-206ENST00000581276 WDR62O43379 1518 aa19.74■□□□□ 0.75
GDPD1-206ENST00000581276 PPP6R1Q9UPN7 881 aa19.65■□□□□ 0.74
GDPD1-206ENST00000581276 CEP164Q9UPV0 1460 aa19.61■□□□□ 0.73
GDPD1-206ENST00000581276 WIZO95785 1651 aa19.59■□□□□ 0.73
GDPD1-206ENST00000581276 MSH5O43196 834 aa19.57■□□□□ 0.72
GDPD1-206ENST00000581276 OSCARQ8IYS5 282 aa19.57■□□□□ 0.72
GDPD1-206ENST00000581276 FANCD2Q9BXW9 1451 aa19.55■□□□□ 0.72
GDPD1-206ENST00000581276 ADRA2BP18089 450 aa19.52■□□□□ 0.72
GDPD1-206ENST00000581276 PIAS4Q8N2W9 510 aaPredicted RBP19.51■□□□□ 0.71
GDPD1-206ENST00000581276 CFTRP13569 1480 aa19.48■□□□□ 0.71
GDPD1-206ENST00000581276 URB2Q14146 1524 aaKnown RBP19.41■□□□□ 0.7
GDPD1-206ENST00000581276 RIMBP3CA6NJZ7 1639 aa19.34■□□□□ 0.69
GDPD1-206ENST00000581276 RIMBP3BA6NNM3 1639 aa19.34■□□□□ 0.69
GDPD1-206ENST00000581276 RIMBP3Q9UFD9 1639 aa19.34■□□□□ 0.69
GDPD1-206ENST00000581276 TOP2AP11388 1531 aaKnown RBP19.31■□□□□ 0.68
GDPD1-206ENST00000581276 RSF1Q96T23 1441 aaPredicted RBP19.3■□□□□ 0.68
GDPD1-206ENST00000581276 PRDM2Q13029 1718 aa19.26■□□□□ 0.67
GDPD1-206ENST00000581276 IFT140Q96RY7 1462 aa19.24■□□□□ 0.67
GDPD1-206ENST00000581276 ARHGEF11O15085 1522 aa19.24■□□□□ 0.67
GDPD1-206ENST00000581276 ZNF608Q9ULD9 1512 aaPredicted RBP19.24■□□□□ 0.67
GDPD1-206ENST00000581276 TOPBP1Q92547 1522 aa19.15■□□□□ 0.66
GDPD1-206ENST00000581276 CYB5RLQ6IPT4 315 aa19.13■□□□□ 0.65
GDPD1-206ENST00000581276 POTEDQ86YR6 584 aa19.13■□□□□ 0.65
GDPD1-206ENST00000581276 EIF4G3O43432 1585 aaKnown RBP19.11■□□□□ 0.65
GDPD1-206ENST00000581276 CCDC88BA6NC98 1476 aa19.11■□□□□ 0.65
GDPD1-206ENST00000581276 ABCC8Q09428 1581 aa19.1■□□□□ 0.65
GDPD1-206ENST00000581276 CHD1O14646 1710 aa19.05■□□□□ 0.64
GDPD1-206ENST00000581276 TRHP20396 242 aaPredicted RBP19.04■□□□□ 0.64
GDPD1-206ENST00000581276 DNMBPQ6XZF7 1577 aa19.04■□□□□ 0.64
GDPD1-206ENST00000581276 AQRO60306 1485 aaKnown RBP eCLIP19.02■□□□□ 0.63
GDPD1-206ENST00000581276 ARAP1Q96P48 1450 aa19.02■□□□□ 0.63
GDPD1-206ENST00000581276 TARBP1Q13395 1621 aaKnown RBP19.01■□□□□ 0.63
GDPD1-206ENST00000581276 FBLN2P98095 1184 aa18.97■□□□□ 0.63
GDPD1-206ENST00000581276 POLA1P09884 1462 aaPredicted RBP18.91■□□□□ 0.62
GDPD1-206ENST00000581276 RAD54L2Q9Y4B4 1467 aa18.85■□□□□ 0.61
GDPD1-206ENST00000581276 TDRD9Q8NDG6 1382 aaKnown RBP18.84■□□□□ 0.61
GDPD1-206ENST00000581276 SOGA1O94964 1423 aa18.83■□□□□ 0.61
GDPD1-206ENST00000581276 CLASP1Q7Z460 1538 aa18.82■□□□□ 0.6
GDPD1-206ENST00000581276 SNAPC4Q5SXM2 1469 aa18.81■□□□□ 0.6
GDPD1-206ENST00000581276 WDR97A6NE52 1622 aa18.81■□□□□ 0.6
GDPD1-206ENST00000581276 SYNJ1O43426 1573 aa18.78■□□□□ 0.6
GDPD1-206ENST00000581276 CHMP7Q8WUX9 453 aaPredicted RBP18.78■□□□□ 0.6
GDPD1-206ENST00000581276 MAGI1Q96QZ7 1491 aaPredicted RBP18.76■□□□□ 0.59
GDPD1-206ENST00000581276 FGD5Q6ZNL6 1462 aa18.74■□□□□ 0.59
GDPD1-206ENST00000581276 GRIN2BQ13224 1484 aa18.71■□□□□ 0.59
GDPD1-206ENST00000581276 SYNJ2O15056 1496 aa18.7■□□□□ 0.58
GDPD1-206ENST00000581276 CUX1P39880 1505 aa18.67■□□□□ 0.58
GDPD1-206ENST00000581276 GAPVD1Q14C86 1478 aa18.65■□□□□ 0.58
GDPD1-206ENST00000581276 PBRM1Q86U86 1689 aa18.61■□□□□ 0.57
GDPD1-206ENST00000581276 ABCA5Q8WWZ7 1642 aa18.52■□□□□ 0.56
GDPD1-206ENST00000581276 ABCA10Q8WWZ4 1543 aa18.52■□□□□ 0.56
GDPD1-206ENST00000581276 ERCC6L2Q5T890 1561 aa18.49■□□□□ 0.55
GDPD1-206ENST00000581276 GRIN2AQ12879 1464 aa18.47■□□□□ 0.55
GDPD1-206ENST00000581276 CEP170Q5SW79 1584 aa18.44■□□□□ 0.54
GDPD1-206ENST00000581276 NUP160Q12769 1436 aa18.42■□□□□ 0.54
GDPD1-206ENST00000581276 ADAMTS12P58397 1594 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms