RNA–Protein interactions for RNA: ENST00000581243.6

STRADA-217, Transcript of STE20-related kinase adaptor alpha, humanhuman

TSL 5

Gene STRADA, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADA-217ENST00000581243 NISCHQ9Y2I1 1504 aa25.71■■□□□ 1.71
STRADA-217ENST00000581243 CCDC180Q9P1Z9 1646 aa22.83■■□□□ 1.25
STRADA-217ENST00000581243 ABCC9O60706 1549 aa22.42■■□□□ 1.18
STRADA-217ENST00000581243 RB1CC1Q8TDY2 1594 aa21.53■■□□□ 1.04
STRADA-217ENST00000581243 DCAF8L2P0C7V8 631 aa21.53■■□□□ 1.04
STRADA-217ENST00000581243 NACADO15069 1562 aa21.51■■□□□ 1.03
STRADA-217ENST00000581243 ZCCHC6Q5VYS8 1495 aaKnown RBP21.39■■□□□ 1.02
STRADA-217ENST00000581243 MYO15BQ96JP2 1530 aa21.38■■□□□ 1.01
STRADA-217ENST00000581243 DCAF1Q9Y4B6 1507 aa21.27■■□□□ 1
STRADA-217ENST00000581243 UNC13AQ9UPW8 1703 aa21.04■□□□□ 0.96
STRADA-217ENST00000581243 PABPN1Q86U42 306 aaKnown RBP eCLIP20.98■□□□□ 0.95
STRADA-217ENST00000581243 BICRAQ9NZM4 1560 aa20.91■□□□□ 0.94
STRADA-217ENST00000581243 SCRIBQ14160 1630 aa20.83■□□□□ 0.93
STRADA-217ENST00000581243 DNAJC5BQ9UF47 199 aa20.7■□□□□ 0.9
STRADA-217ENST00000581243 SHROOM4Q9ULL8 1493 aa20.65■□□□□ 0.9
STRADA-217ENST00000581243 EIF4G1Q04637 1599 aaKnown RBP20.34■□□□□ 0.85
STRADA-217ENST00000581243 CC2D2AQ9P2K1 1620 aa20.27■□□□□ 0.84
STRADA-217ENST00000581243 CECR2Q9BXF3 1484 aa20.15■□□□□ 0.82
STRADA-217ENST00000581243 SMARCA4P51532 1647 aa19.94■□□□□ 0.78
STRADA-217ENST00000581243 BAZ1AQ9NRL2 1556 aaPredicted RBP19.91■□□□□ 0.78
STRADA-217ENST00000581243 NCAPD3P42695 1498 aa19.88■□□□□ 0.77
STRADA-217ENST00000581243 ATAD2BQ9ULI0 1458 aa19.87■□□□□ 0.77
STRADA-217ENST00000581243 SMARCA2P51531 1590 aa19.82■□□□□ 0.76
STRADA-217ENST00000581243 MROH2BQ7Z745 1585 aa19.82■□□□□ 0.76
STRADA-217ENST00000581243 PEG3Q9GZU2 1588 aa19.75■□□□□ 0.75
STRADA-217ENST00000581243 HMGXB3Q12766 1538 aa19.73■□□□□ 0.75
STRADA-217ENST00000581243 BAZ1BQ9UIG0 1483 aaKnown RBP19.68■□□□□ 0.74
STRADA-217ENST00000581243 RSF1Q96T23 1441 aaPredicted RBP19.59■□□□□ 0.73
STRADA-217ENST00000581243 WIZO95785 1651 aa19.59■□□□□ 0.73
STRADA-217ENST00000581243 NESP48681 1621 aa19.4■□□□□ 0.7
STRADA-217ENST00000581243 TOP2AP11388 1531 aaKnown RBP19.36■□□□□ 0.69
STRADA-217ENST00000581243 LAMC3Q9Y6N6 1575 aa19.32■□□□□ 0.68
STRADA-217ENST00000581243 ERCC6Q03468 1493 aa19.3■□□□□ 0.68
STRADA-217ENST00000581243 CADPSQ9ULU8 1353 aa19.3■□□□□ 0.68
STRADA-217ENST00000581243 PDS5BQ9NTI5 1447 aa19.21■□□□□ 0.67
STRADA-217ENST00000581243 CCDC88BA6NC98 1476 aa19.18■□□□□ 0.66
STRADA-217ENST00000581243 CFTRP13569 1480 aa19.16■□□□□ 0.66
STRADA-217ENST00000581243 CUX2O14529 1486 aa19.13■□□□□ 0.65
STRADA-217ENST00000581243 KIF21AQ7Z4S6 1674 aa19.13■□□□□ 0.65
STRADA-217ENST00000581243 THOC2Q8NI27 1593 aaKnown RBP19.08■□□□□ 0.65
STRADA-217ENST00000581243 SUPT5HO00267 1087 aaKnown RBP19.07■□□□□ 0.64
STRADA-217ENST00000581243 FANCD2Q9BXW9 1451 aa19.05■□□□□ 0.64
STRADA-217ENST00000581243 AEBP2Q6ZN18 517 aaPredicted RBP19.05■□□□□ 0.64
STRADA-217ENST00000581243 CEP164Q9UPV0 1460 aa19.02■□□□□ 0.63
STRADA-217ENST00000581243 MRC2Q9UBG0 1479 aa19■□□□□ 0.63
STRADA-217ENST00000581243 PRDM2Q13029 1718 aa18.94■□□□□ 0.62
STRADA-217ENST00000581243 WDR62O43379 1518 aa18.94■□□□□ 0.62
STRADA-217ENST00000581243 URB2Q14146 1524 aaKnown RBP18.87■□□□□ 0.61
STRADA-217ENST00000581243 CHIC1Q5VXU3 224 aa18.76■□□□□ 0.59
STRADA-217ENST00000581243 TOPBP1Q92547 1522 aa18.74■□□□□ 0.59
STRADA-217ENST00000581243 ABCC8Q09428 1581 aa18.74■□□□□ 0.59
STRADA-217ENST00000581243 DNMBPQ6XZF7 1577 aa18.69■□□□□ 0.58
STRADA-217ENST00000581243 DNAJC5Q9H3Z4 198 aa18.66■□□□□ 0.58
STRADA-217ENST00000581243 IFT140Q96RY7 1462 aa18.63■□□□□ 0.57
STRADA-217ENST00000581243 CUX1P39880 1505 aa18.59■□□□□ 0.57
STRADA-217ENST00000581243 POLA1P09884 1462 aaPredicted RBP18.58■□□□□ 0.56
STRADA-217ENST00000581243 ZNF608Q9ULD9 1512 aaPredicted RBP18.56■□□□□ 0.56
STRADA-217ENST00000581243 TARBP1Q13395 1621 aaKnown RBP18.54■□□□□ 0.56
STRADA-217ENST00000581243 SOGA1O94964 1423 aa18.53■□□□□ 0.56
STRADA-217ENST00000581243 FGD5Q6ZNL6 1462 aa18.52■□□□□ 0.56
STRADA-217ENST00000581243 RAD54L2Q9Y4B4 1467 aa18.52■□□□□ 0.55
STRADA-217ENST00000581243 AQRO60306 1485 aaKnown RBP eCLIP18.47■□□□□ 0.553e-6■■□□□ 13.8
STRADA-217ENST00000581243 WRNQ14191 1432 aaPredicted RBP eCLIP18.45■□□□□ 0.54
STRADA-217ENST00000581243 EIF4G3O43432 1585 aaKnown RBP18.45■□□□□ 0.54
STRADA-217ENST00000581243 TDRD9Q8NDG6 1382 aaKnown RBP18.43■□□□□ 0.54
STRADA-217ENST00000581243 TOP2BQ02880 1626 aa18.4■□□□□ 0.54
STRADA-217ENST00000581243 SYNJ1O43426 1573 aa18.39■□□□□ 0.53
STRADA-217ENST00000581243 BIVM-ERCC5R4GMW8 1640 aa18.39■□□□□ 0.53
STRADA-217ENST00000581243 OSCARQ8IYS5 282 aa18.38■□□□□ 0.53
STRADA-217ENST00000581243 WDR97A6NE52 1622 aa18.36■□□□□ 0.53
STRADA-217ENST00000581243 ABCA10Q8WWZ4 1543 aa18.35■□□□□ 0.53
STRADA-217ENST00000581243 GRIN2BQ13224 1484 aa18.29■□□□□ 0.52
STRADA-217ENST00000581243 GAPVD1Q14C86 1478 aa18.29■□□□□ 0.52
STRADA-217ENST00000581243 SNAPC4Q5SXM2 1469 aa18.26■□□□□ 0.51
STRADA-217ENST00000581243 ABCA5Q8WWZ7 1642 aa18.26■□□□□ 0.51
STRADA-217ENST00000581243 FBLN2P98095 1184 aa18.25■□□□□ 0.51
STRADA-217ENST00000581243 MAGI1Q96QZ7 1491 aaPredicted RBP18.24■□□□□ 0.51
STRADA-217ENST00000581243 CHD1O14646 1710 aa18.22■□□□□ 0.51
STRADA-217ENST00000581243 PBRM1Q86U86 1689 aa18.21■□□□□ 0.51
STRADA-217ENST00000581243 CHMP7Q8WUX9 453 aaPredicted RBP18.2■□□□□ 0.5
STRADA-217ENST00000581243 SYNJ2O15056 1496 aa18.18■□□□□ 0.5
STRADA-217ENST00000581243 ERICH3Q5RHP9 1530 aa18.12■□□□□ 0.49
STRADA-217ENST00000581243 FHAD1B1AJZ9 1412 aa18.08■□□□□ 0.49
STRADA-217ENST00000581243 ADAMTS12P58397 1594 aa18.08■□□□□ 0.48
STRADA-217ENST00000581243 KIF27Q86VH2 1401 aa18.06■□□□□ 0.48
STRADA-217ENST00000581243 GRIN2AQ12879 1464 aa18.06■□□□□ 0.48
STRADA-217ENST00000581243 CLASP1Q7Z460 1538 aa18.05■□□□□ 0.48
STRADA-217ENST00000581243 IGF1RP08069 1367 aa18.04■□□□□ 0.48
STRADA-217ENST00000581243 RIMBP3CA6NJZ7 1639 aa18.04■□□□□ 0.48
STRADA-217ENST00000581243 RIMBP3BA6NNM3 1639 aa18.04■□□□□ 0.48
STRADA-217ENST00000581243 RIMBP3Q9UFD9 1639 aa18.04■□□□□ 0.48
STRADA-217ENST00000581243 ARHGEF11O15085 1522 aa18.03■□□□□ 0.48
STRADA-217ENST00000581243 TRIM41Q8WV44 630 aa18.02■□□□□ 0.48
STRADA-217ENST00000581243 NUP160Q12769 1436 aa17.98■□□□□ 0.47
STRADA-217ENST00000581243 CEP170Q5SW79 1584 aa17.96■□□□□ 0.46
STRADA-217ENST00000581243 RUSC2Q8N2Y8 1516 aa17.93■□□□□ 0.46
STRADA-217ENST00000581243 CYB5RLQ6IPT4 315 aa17.92■□□□□ 0.46
STRADA-217ENST00000581243 CUL7Q14999 1698 aa17.92■□□□□ 0.46
STRADA-217ENST00000581243 CARMIL1Q5VZK9 1371 aa17.91■□□□□ 0.46
STRADA-217ENST00000581243 ARAP1Q96P48 1450 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms