RNA–Protein interactions for RNA: ENST00000581047.2

RN7SL557P-201, Transcript of RNA, 7SL, cytoplasmic 557, pseudogene, humanhuman

BASIC

Gene RN7SL557P, Length 286 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL557P-201ENST00000581047 NISCHQ9Y2I1 1504 aa22.7■■□□□ 1.22
RN7SL557P-201ENST00000581047 CCDC180Q9P1Z9 1646 aa20.2■□□□□ 0.82
RN7SL557P-201ENST00000581047 ABCC9O60706 1549 aa19.36■□□□□ 0.69
RN7SL557P-201ENST00000581047 ZCCHC6Q5VYS8 1495 aaKnown RBP18.98■□□□□ 0.63
RN7SL557P-201ENST00000581047 NACADO15069 1562 aa18.86■□□□□ 0.61
RN7SL557P-201ENST00000581047 MYO15BQ96JP2 1530 aa18.85■□□□□ 0.61
RN7SL557P-201ENST00000581047 DCAF1Q9Y4B6 1507 aa18.84■□□□□ 0.61
RN7SL557P-201ENST00000581047 RB1CC1Q8TDY2 1594 aa18.83■□□□□ 0.6
RN7SL557P-201ENST00000581047 DCAF8L2P0C7V8 631 aa18.69■□□□□ 0.58
RN7SL557P-201ENST00000581047 UNC13AQ9UPW8 1703 aa18.49■□□□□ 0.55
RN7SL557P-201ENST00000581047 SCRIBQ14160 1630 aa18.34■□□□□ 0.53
RN7SL557P-201ENST00000581047 BICRAQ9NZM4 1560 aa18.24■□□□□ 0.51
RN7SL557P-201ENST00000581047 SHROOM4Q9ULL8 1493 aa18.13■□□□□ 0.49
RN7SL557P-201ENST00000581047 PABPN1Q86U42 306 aaKnown RBP eCLIP18.05■□□□□ 0.48
RN7SL557P-201ENST00000581047 EIF4G1Q04637 1599 aaKnown RBP17.73■□□□□ 0.43
RN7SL557P-201ENST00000581047 CECR2Q9BXF3 1484 aa17.61■□□□□ 0.41
RN7SL557P-201ENST00000581047 BAZ1AQ9NRL2 1556 aaPredicted RBP17.61■□□□□ 0.41
RN7SL557P-201ENST00000581047 SMARCA4P51532 1647 aa17.61■□□□□ 0.41
RN7SL557P-201ENST00000581047 CC2D2AQ9P2K1 1620 aa17.6■□□□□ 0.41
RN7SL557P-201ENST00000581047 DNAJC5BQ9UF47 199 aa17.48■□□□□ 0.39
RN7SL557P-201ENST00000581047 MROH2BQ7Z745 1585 aa17.48■□□□□ 0.39
RN7SL557P-201ENST00000581047 PEG3Q9GZU2 1588 aa17.45■□□□□ 0.38
RN7SL557P-201ENST00000581047 SMARCA2P51531 1590 aa17.43■□□□□ 0.38
RN7SL557P-201ENST00000581047 ATAD2BQ9ULI0 1458 aa17.39■□□□□ 0.37
RN7SL557P-201ENST00000581047 NCAPD3P42695 1498 aa17.36■□□□□ 0.37
RN7SL557P-201ENST00000581047 HMGXB3Q12766 1538 aa17.36■□□□□ 0.37
RN7SL557P-201ENST00000581047 WIZO95785 1651 aa17.34■□□□□ 0.37
RN7SL557P-201ENST00000581047 RSF1Q96T23 1441 aaPredicted RBP17.34■□□□□ 0.37
RN7SL557P-201ENST00000581047 BAZ1BQ9UIG0 1483 aaKnown RBP17.27■□□□□ 0.36
RN7SL557P-201ENST00000581047 TOP2AP11388 1531 aaKnown RBP17.18■□□□□ 0.34
RN7SL557P-201ENST00000581047 SUPT5HO00267 1087 aaKnown RBP16.97■□□□□ 0.31
RN7SL557P-201ENST00000581047 CCDC88BA6NC98 1476 aa16.92■□□□□ 0.3
RN7SL557P-201ENST00000581047 LAMC3Q9Y6N6 1575 aa16.91■□□□□ 0.3
RN7SL557P-201ENST00000581047 PRDM2Q13029 1718 aa16.88■□□□□ 0.29
RN7SL557P-201ENST00000581047 NESP48681 1621 aa16.84■□□□□ 0.29
RN7SL557P-201ENST00000581047 CADPSQ9ULU8 1353 aa16.83■□□□□ 0.28
RN7SL557P-201ENST00000581047 CFTRP13569 1480 aa16.81■□□□□ 0.28
RN7SL557P-201ENST00000581047 KIF21AQ7Z4S6 1674 aa16.75■□□□□ 0.27
RN7SL557P-201ENST00000581047 PDS5BQ9NTI5 1447 aa16.72■□□□□ 0.27
RN7SL557P-201ENST00000581047 ERCC6Q03468 1493 aa16.68■□□□□ 0.26
RN7SL557P-201ENST00000581047 FANCD2Q9BXW9 1451 aa16.66■□□□□ 0.26
RN7SL557P-201ENST00000581047 CEP164Q9UPV0 1460 aa16.64■□□□□ 0.25
RN7SL557P-201ENST00000581047 THOC2Q8NI27 1593 aaKnown RBP16.63■□□□□ 0.25
RN7SL557P-201ENST00000581047 MRC2Q9UBG0 1479 aa16.56■□□□□ 0.24
RN7SL557P-201ENST00000581047 WDR62O43379 1518 aa16.54■□□□□ 0.24
RN7SL557P-201ENST00000581047 CUX2O14529 1486 aa16.48■□□□□ 0.23
RN7SL557P-201ENST00000581047 URB2Q14146 1524 aaKnown RBP16.48■□□□□ 0.23
RN7SL557P-201ENST00000581047 ABCC8Q09428 1581 aa16.47■□□□□ 0.23
RN7SL557P-201ENST00000581047 DNMBPQ6XZF7 1577 aa16.47■□□□□ 0.23
RN7SL557P-201ENST00000581047 TOPBP1Q92547 1522 aa16.44■□□□□ 0.22
RN7SL557P-201ENST00000581047 CUX1P39880 1505 aa16.4■□□□□ 0.22
RN7SL557P-201ENST00000581047 BIVM-ERCC5R4GMW8 1640 aa16.39■□□□□ 0.21
RN7SL557P-201ENST00000581047 TOP2BQ02880 1626 aa16.36■□□□□ 0.21
RN7SL557P-201ENST00000581047 WRNQ14191 1432 aaPredicted RBP eCLIP16.36■□□□□ 0.21
RN7SL557P-201ENST00000581047 SYNJ1O43426 1573 aa16.34■□□□□ 0.21
RN7SL557P-201ENST00000581047 POLA1P09884 1462 aaPredicted RBP16.3■□□□□ 0.2
RN7SL557P-201ENST00000581047 FGD5Q6ZNL6 1462 aa16.3■□□□□ 0.2
RN7SL557P-201ENST00000581047 TARBP1Q13395 1621 aaKnown RBP16.27■□□□□ 0.2
RN7SL557P-201ENST00000581047 IFT140Q96RY7 1462 aa16.27■□□□□ 0.19
RN7SL557P-201ENST00000581047 WDR97A6NE52 1622 aa16.27■□□□□ 0.19
RN7SL557P-201ENST00000581047 SOGA1O94964 1423 aa16.2■□□□□ 0.18
RN7SL557P-201ENST00000581047 RAD54L2Q9Y4B4 1467 aa16.19■□□□□ 0.18
RN7SL557P-201ENST00000581047 EIF4G3O43432 1585 aaKnown RBP16.17■□□□□ 0.18
RN7SL557P-201ENST00000581047 ABCA10Q8WWZ4 1543 aa16.17■□□□□ 0.18
RN7SL557P-201ENST00000581047 ZNF608Q9ULD9 1512 aaPredicted RBP16.14■□□□□ 0.18
RN7SL557P-201ENST00000581047 ABCA5Q8WWZ7 1642 aa16.13■□□□□ 0.17
RN7SL557P-201ENST00000581047 PBRM1Q86U86 1689 aa16.11■□□□□ 0.17
RN7SL557P-201ENST00000581047 AQRO60306 1485 aaKnown RBP eCLIP16.06■□□□□ 0.16
RN7SL557P-201ENST00000581047 TRIM41Q8WV44 630 aa16.06■□□□□ 0.16
RN7SL557P-201ENST00000581047 GAPVD1Q14C86 1478 aa16.05■□□□□ 0.16
RN7SL557P-201ENST00000581047 TDRD9Q8NDG6 1382 aaKnown RBP16.05■□□□□ 0.16
RN7SL557P-201ENST00000581047 GRIN2BQ13224 1484 aa16.02■□□□□ 0.15
RN7SL557P-201ENST00000581047 CHIC1Q5VXU3 224 aa16.01■□□□□ 0.15
RN7SL557P-201ENST00000581047 ERICH3Q5RHP9 1530 aa16■□□□□ 0.15
RN7SL557P-201ENST00000581047 KIF27Q86VH2 1401 aa16■□□□□ 0.15
RN7SL557P-201ENST00000581047 MAGI1Q96QZ7 1491 aaPredicted RBP15.98■□□□□ 0.15
RN7SL557P-201ENST00000581047 SNAPC4Q5SXM2 1469 aa15.97■□□□□ 0.15
RN7SL557P-201ENST00000581047 CHD1O14646 1710 aa15.96■□□□□ 0.15
RN7SL557P-201ENST00000581047 ADAMTS12P58397 1594 aa15.96■□□□□ 0.14
RN7SL557P-201ENST00000581047 CUL7Q14999 1698 aa15.95■□□□□ 0.14
RN7SL557P-201ENST00000581047 SYNJ2O15056 1496 aa15.9■□□□□ 0.14
RN7SL557P-201ENST00000581047 RUSC2Q8N2Y8 1516 aa15.89■□□□□ 0.13
RN7SL557P-201ENST00000581047 EEA1Q15075 1411 aa15.88■□□□□ 0.13
RN7SL557P-201ENST00000581047 FHAD1B1AJZ9 1412 aa15.87■□□□□ 0.13
RN7SL557P-201ENST00000581047 IGF1RP08069 1367 aa15.86■□□□□ 0.13
RN7SL557P-201ENST00000581047 GRIN2AQ12879 1464 aa15.83■□□□□ 0.12
RN7SL557P-201ENST00000581047 CARMIL1Q5VZK9 1371 aa15.78■□□□□ 0.12
RN7SL557P-201ENST00000581047 CHMP7Q8WUX9 453 aaPredicted RBP15.78■□□□□ 0.12
RN7SL557P-201ENST00000581047 FBLN2P98095 1184 aa15.76■□□□□ 0.11
RN7SL557P-201ENST00000581047 PRXQ9BXM0 1461 aa15.76■□□□□ 0.11
RN7SL557P-201ENST00000581047 RAPGEF2Q9Y4G8 1499 aa15.76■□□□□ 0.11
RN7SL557P-201ENST00000581047 CEP170Q5SW79 1584 aa15.75■□□□□ 0.11
RN7SL557P-201ENST00000581047 NUP160Q12769 1436 aa15.75■□□□□ 0.11
RN7SL557P-201ENST00000581047 KIF21BO75037 1637 aa15.75■□□□□ 0.11
RN7SL557P-201ENST00000581047 CLASP1Q7Z460 1538 aa15.74■□□□□ 0.11
RN7SL557P-201ENST00000581047 OSCARQ8IYS5 282 aa15.74■□□□□ 0.11
RN7SL557P-201ENST00000581047 CSRNP3Q8WYN3 585 aa15.73■□□□□ 0.11
RN7SL557P-201ENST00000581047 CTTNBP2Q8WZ74 1663 aa15.71■□□□□ 0.11
RN7SL557P-201ENST00000581047 DNAJC5Q9H3Z4 198 aa15.68■□□□□ 0.1
RN7SL557P-201ENST00000581047 SHROOM2Q13796 1616 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms