RNA–Protein interactions for RNA: ENST00000581029.5

GAPLINC-203, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 613 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-203ENST00000581029 NISCHQ9Y2I1 1504 aa21.18■□□□□ 0.98
GAPLINC-203ENST00000581029 AEBP2Q6ZN18 517 aaPredicted RBP19.18■□□□□ 0.66
GAPLINC-203ENST00000581029 CCDC180Q9P1Z9 1646 aa18.71■□□□□ 0.58
GAPLINC-203ENST00000581029 CHIC1Q5VXU3 224 aa18.5■□□□□ 0.55
GAPLINC-203ENST00000581029 ABCC9O60706 1549 aa17.77■□□□□ 0.43
GAPLINC-203ENST00000581029 ZCCHC6Q5VYS8 1495 aaKnown RBP17.72■□□□□ 0.43
GAPLINC-203ENST00000581029 DCAF1Q9Y4B6 1507 aa17.63■□□□□ 0.41
GAPLINC-203ENST00000581029 MYO15BQ96JP2 1530 aa17.58■□□□□ 0.41
GAPLINC-203ENST00000581029 NACADO15069 1562 aa17.51■□□□□ 0.39
GAPLINC-203ENST00000581029 DCAF8L2P0C7V8 631 aa17.5■□□□□ 0.39
GAPLINC-203ENST00000581029 RB1CC1Q8TDY2 1594 aa17.4■□□□□ 0.38
GAPLINC-203ENST00000581029 SCRIBQ14160 1630 aa16.96■□□□□ 0.31
GAPLINC-203ENST00000581029 UNC13AQ9UPW8 1703 aa16.87■□□□□ 0.29
GAPLINC-203ENST00000581029 SHROOM4Q9ULL8 1493 aa16.86■□□□□ 0.29
GAPLINC-203ENST00000581029 BICRAQ9NZM4 1560 aa16.72■□□□□ 0.27
GAPLINC-203ENST00000581029 PABPN1Q86U42 306 aaKnown RBP eCLIP16.65■□□□□ 0.26
GAPLINC-203ENST00000581029 BAZ1AQ9NRL2 1556 aaPredicted RBP16.44■□□□□ 0.22
GAPLINC-203ENST00000581029 SENP3Q9H4L4 574 aaPredicted RBP16.41■□□□□ 0.22
GAPLINC-203ENST00000581029 CECR2Q9BXF3 1484 aa16.35■□□□□ 0.21
GAPLINC-203ENST00000581029 PHF23Q9BUL5 403 aaPredicted RBP16.33■□□□□ 0.2
GAPLINC-203ENST00000581029 SMARCA4P51532 1647 aa16.33■□□□□ 0.2
GAPLINC-203ENST00000581029 EIF4G1Q04637 1599 aaKnown RBP16.31■□□□□ 0.2
GAPLINC-203ENST00000581029 RSF1Q96T23 1441 aaPredicted RBP16.26■□□□□ 0.19
GAPLINC-203ENST00000581029 MROH2BQ7Z745 1585 aa16.26■□□□□ 0.19
GAPLINC-203ENST00000581029 SMARCA2P51531 1590 aa16.22■□□□□ 0.19
GAPLINC-203ENST00000581029 PEG3Q9GZU2 1588 aa16.21■□□□□ 0.19
GAPLINC-203ENST00000581029 SUPT5HO00267 1087 aaKnown RBP16.15■□□□□ 0.18
GAPLINC-203ENST00000581029 ATAD2BQ9ULI0 1458 aa16.14■□□□□ 0.17
GAPLINC-203ENST00000581029 CC2D2AQ9P2K1 1620 aa16.12■□□□□ 0.17
GAPLINC-203ENST00000581029 NCAPD3P42695 1498 aa16.12■□□□□ 0.17
GAPLINC-203ENST00000581029 WIZO95785 1651 aa16.1■□□□□ 0.17
GAPLINC-203ENST00000581029 HMGXB3Q12766 1538 aa16.09■□□□□ 0.17
GAPLINC-203ENST00000581029 BAZ1BQ9UIG0 1483 aaKnown RBP16.06■□□□□ 0.16
GAPLINC-203ENST00000581029 TOP2AP11388 1531 aaKnown RBP16.04■□□□□ 0.16
GAPLINC-203ENST00000581029 DNAJC5BQ9UF47 199 aa15.82■□□□□ 0.12
GAPLINC-203ENST00000581029 CCDC88BA6NC98 1476 aa15.8■□□□□ 0.12
GAPLINC-203ENST00000581029 CADPSQ9ULU8 1353 aa15.67■□□□□ 0.1
GAPLINC-203ENST00000581029 CFTRP13569 1480 aa15.65■□□□□ 0.1
GAPLINC-203ENST00000581029 LAMC3Q9Y6N6 1575 aa15.64■□□□□ 0.09
GAPLINC-203ENST00000581029 PRDM2Q13029 1718 aa15.58■□□□□ 0.08
GAPLINC-203ENST00000581029 PDS5BQ9NTI5 1447 aa15.55■□□□□ 0.08
GAPLINC-203ENST00000581029 FANCD2Q9BXW9 1451 aa15.46■□□□□ 0.06
GAPLINC-203ENST00000581029 NESP48681 1621 aa15.45■□□□□ 0.06
GAPLINC-203ENST00000581029 CEP164Q9UPV0 1460 aa15.43■□□□□ 0.06
GAPLINC-203ENST00000581029 ABCC8Q09428 1581 aa15.41■□□□□ 0.06
GAPLINC-203ENST00000581029 WRNQ14191 1432 aaPredicted RBP eCLIP15.38■□□□□ 0.05
GAPLINC-203ENST00000581029 ERCC6Q03468 1493 aa15.38■□□□□ 0.05
GAPLINC-203ENST00000581029 TRIM41Q8WV44 630 aa15.33■□□□□ 0.04
GAPLINC-203ENST00000581029 KIF21AQ7Z4S6 1674 aa15.32■□□□□ 0.04
GAPLINC-203ENST00000581029 MRC2Q9UBG0 1479 aa15.31■□□□□ 0.04
GAPLINC-203ENST00000581029 DNMBPQ6XZF7 1577 aa15.29■□□□□ 0.04
GAPLINC-203ENST00000581029 TOP2BQ02880 1626 aa15.28■□□□□ 0.04
GAPLINC-203ENST00000581029 BIVM-ERCC5R4GMW8 1640 aa15.27■□□□□ 0.03
GAPLINC-203ENST00000581029 TOPBP1Q92547 1522 aa15.24■□□□□ 0.03
GAPLINC-203ENST00000581029 CUX1P39880 1505 aa15.23■□□□□ 0.03
GAPLINC-203ENST00000581029 WDR62O43379 1518 aa15.22■□□□□ 0.03
GAPLINC-203ENST00000581029 SYNJ1O43426 1573 aa15.21■□□□□ 0.03
GAPLINC-203ENST00000581029 URB2Q14146 1524 aaKnown RBP15.21■□□□□ 0.03
GAPLINC-203ENST00000581029 FOXD1Q16676 465 aa15.19■□□□□ 0.02
GAPLINC-203ENST00000581029 THOC2Q8NI27 1593 aaKnown RBP15.19■□□□□ 0.02
GAPLINC-203ENST00000581029 FGD5Q6ZNL6 1462 aa15.15■□□□□ 0.02
GAPLINC-203ENST00000581029 EEA1Q15075 1411 aa15.14■□□□□ 0.01
GAPLINC-203ENST00000581029 POLA1P09884 1462 aaPredicted RBP15.14■□□□□ 0.01
GAPLINC-203ENST00000581029 SOGA1O94964 1423 aa15.12■□□□□ 0.01
GAPLINC-203ENST00000581029 CUX2O14529 1486 aa15.1■□□□□ 0.01
GAPLINC-203ENST00000581029 IFT140Q96RY7 1462 aa15.1■□□□□ 0.01
GAPLINC-203ENST00000581029 WDR97A6NE52 1622 aa15.09■□□□□ 0.01
GAPLINC-203ENST00000581029 ABCA10Q8WWZ4 1543 aa15.07■□□□□ 0
GAPLINC-203ENST00000581029 KIF27Q86VH2 1401 aa15.07■□□□□ 0
GAPLINC-203ENST00000581029 TARBP1Q13395 1621 aaKnown RBP15.02□□□□□ -0.01
GAPLINC-203ENST00000581029 RAD54L2Q9Y4B4 1467 aa15.01□□□□□ -0.01
GAPLINC-203ENST00000581029 CSRNP3Q8WYN3 585 aa14.96□□□□□ -0.01
GAPLINC-203ENST00000581029 GAPVD1Q14C86 1478 aa14.95□□□□□ -0.02
GAPLINC-203ENST00000581029 ABCA5Q8WWZ7 1642 aa14.94□□□□□ -0.02
GAPLINC-203ENST00000581029 ERICH3Q5RHP9 1530 aa14.93□□□□□ -0.02
GAPLINC-203ENST00000581029 GRIN2BQ13224 1484 aa14.92□□□□□ -0.02
GAPLINC-203ENST00000581029 TDRD9Q8NDG6 1382 aaKnown RBP14.91□□□□□ -0.02
GAPLINC-203ENST00000581029 CUL7Q14999 1698 aa14.88□□□□□ -0.03
GAPLINC-203ENST00000581029 PLPPR3Q6T4P5 718 aa14.88□□□□□ -0.03
GAPLINC-203ENST00000581029 FAM9AQ8IZU1 332 aaPredicted RBP14.88□□□□□ -0.03
GAPLINC-203ENST00000581029 IGF1RP08069 1367 aa14.87□□□□□ -0.03
GAPLINC-203ENST00000581029 EIF4G3O43432 1585 aaKnown RBP14.87□□□□□ -0.03
GAPLINC-203ENST00000581029 AQRO60306 1485 aaKnown RBP eCLIP14.87□□□□□ -0.03
GAPLINC-203ENST00000581029 RUSC2Q8N2Y8 1516 aa14.87□□□□□ -0.03
GAPLINC-203ENST00000581029 ZNF608Q9ULD9 1512 aaPredicted RBP14.86□□□□□ -0.03
GAPLINC-203ENST00000581029 PBRM1Q86U86 1689 aa14.85□□□□□ -0.03
GAPLINC-203ENST00000581029 MAGI1Q96QZ7 1491 aaPredicted RBP14.85□□□□□ -0.03
GAPLINC-203ENST00000581029 KIF21BO75037 1637 aa14.84□□□□□ -0.03
GAPLINC-203ENST00000581029 CARMIL1Q5VZK9 1371 aa14.84□□□□□ -0.03
GAPLINC-203ENST00000581029 PRXQ9BXM0 1461 aa14.82□□□□□ -0.04
GAPLINC-203ENST00000581029 FHAD1B1AJZ9 1412 aa14.82□□□□□ -0.04
GAPLINC-203ENST00000581029 RAPGEF2Q9Y4G8 1499 aa14.82□□□□□ -0.04
GAPLINC-203ENST00000581029 GOLGA3Q08378 1498 aa14.81□□□□□ -0.04
GAPLINC-203ENST00000581029 SYNJ2O15056 1496 aa14.76□□□□□ -0.05
GAPLINC-203ENST00000581029 SNAPC4Q5SXM2 1469 aa14.76□□□□□ -0.05
GAPLINC-203ENST00000581029 ADAMTS12P58397 1594 aa14.76□□□□□ -0.05
GAPLINC-203ENST00000581029 CHMP7Q8WUX9 453 aaPredicted RBP14.74□□□□□ -0.05
GAPLINC-203ENST00000581029 UBTFP17480 764 aaKnown RBP14.73□□□□□ -0.05
GAPLINC-203ENST00000581029 TNIKQ9UKE5 1360 aa14.71□□□□□ -0.06
GAPLINC-203ENST00000581029 GRIN2AQ12879 1464 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms