RNA–Protein interactions for RNA: ENST00000581002.1

BRD2-216, Transcript of bromodomain containing 2, humanhuman

TSL 4

Gene BRD2, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2-216ENST00000581002 NISCHQ9Y2I1 1504 aa49.74■■■■■ 5.55
BRD2-216ENST00000581002 CCDC180Q9P1Z9 1646 aa44.47■■■■■ 4.71
BRD2-216ENST00000581002 ABCC9O60706 1549 aa44.33■■■■■ 4.69
BRD2-216ENST00000581002 RB1CC1Q8TDY2 1594 aa42.27■■■■■ 4.36
BRD2-216ENST00000581002 DCAF8L2P0C7V8 631 aa42.13■■■■■ 4.33
BRD2-216ENST00000581002 NACADO15069 1562 aa42.01■■■■■ 4.32
BRD2-216ENST00000581002 MYO15BQ96JP2 1530 aa41.46■■■■■ 4.23
BRD2-216ENST00000581002 PABPN1Q86U42 306 aaKnown RBP eCLIP41.37■■■■■ 4.21
BRD2-216ENST00000581002 DNAJC5BQ9UF47 199 aa41.3■■■■■ 4.2
BRD2-216ENST00000581002 ZCCHC6Q5VYS8 1495 aaKnown RBP41.26■■■■■ 4.2
BRD2-216ENST00000581002 UNC13AQ9UPW8 1703 aa41.25■■■■■ 4.19
BRD2-216ENST00000581002 DCAF1Q9Y4B6 1507 aa41.04■■■■■ 4.16
BRD2-216ENST00000581002 BICRAQ9NZM4 1560 aa40.95■■■■■ 4.15
BRD2-216ENST00000581002 SCRIBQ14160 1630 aa40.64■■■■■ 4.1
BRD2-216ENST00000581002 SHROOM4Q9ULL8 1493 aa40.42■■■■■ 4.06
BRD2-216ENST00000581002 CC2D2AQ9P2K1 1620 aa40.01■■■■■ 4
BRD2-216ENST00000581002 EIF4G1Q04637 1599 aaKnown RBP39.97■■■■□ 3.99
BRD2-216ENST00000581002 CECR2Q9BXF3 1484 aa39.88■■■■□ 3.98
BRD2-216ENST00000581002 NCAPD3P42695 1498 aa38.78■■■■□ 3.8
BRD2-216ENST00000581002 SMARCA4P51532 1647 aa38.74■■■■□ 3.79
BRD2-216ENST00000581002 ATAD2BQ9ULI0 1458 aa38.72■■■■□ 3.79
BRD2-216ENST00000581002 SMARCA2P51531 1590 aa38.64■■■■□ 3.78
BRD2-216ENST00000581002 BAZ1AQ9NRL2 1556 aaPredicted RBP38.61■■■■□ 3.77
BRD2-216ENST00000581002 HMGXB3Q12766 1538 aa38.5■■■■□ 3.75
BRD2-216ENST00000581002 BAZ1BQ9UIG0 1483 aaKnown RBP38.41■■■■□ 3.74
BRD2-216ENST00000581002 MROH2BQ7Z745 1585 aa38.34■■■■□ 3.73
BRD2-216ENST00000581002 ERCC6Q03468 1493 aa38.3■■■■□ 3.72
BRD2-216ENST00000581002 PEG3Q9GZU2 1588 aa38.3■■■■□ 3.72
BRD2-216ENST00000581002 NESP48681 1621 aa38.12■■■■□ 3.69
BRD2-216ENST00000581002 CUX2O14529 1486 aa38.03■■■■□ 3.68
BRD2-216ENST00000581002 WIZO95785 1651 aa37.92■■■■□ 3.66
BRD2-216ENST00000581002 LAMC3Q9Y6N6 1575 aa37.88■■■■□ 3.65
BRD2-216ENST00000581002 DNAJC5Q9H3Z4 198 aa37.74■■■■□ 3.63
BRD2-216ENST00000581002 PDS5BQ9NTI5 1447 aa37.71■■■■□ 3.63
BRD2-216ENST00000581002 CADPSQ9ULU8 1353 aa37.67■■■■□ 3.62
BRD2-216ENST00000581002 RSF1Q96T23 1441 aaPredicted RBP37.65■■■■□ 3.62
BRD2-216ENST00000581002 KIF21AQ7Z4S6 1674 aa37.62■■■■□ 3.61
BRD2-216ENST00000581002 THOC2Q8NI27 1593 aaKnown RBP37.61■■■■□ 3.61
BRD2-216ENST00000581002 TOP2AP11388 1531 aaKnown RBP37.43■■■■□ 3.58
BRD2-216ENST00000581002 MRC2Q9UBG0 1479 aa37.33■■■■□ 3.57
BRD2-216ENST00000581002 CEP164Q9UPV0 1460 aa37.27■■■■□ 3.56
BRD2-216ENST00000581002 CFTRP13569 1480 aa37.25■■■■□ 3.55
BRD2-216ENST00000581002 FANCD2Q9BXW9 1451 aa37.25■■■■□ 3.55
BRD2-216ENST00000581002 WDR62O43379 1518 aa37.19■■■■□ 3.54
BRD2-216ENST00000581002 CCDC88BA6NC98 1476 aa37.04■■■■□ 3.52
BRD2-216ENST00000581002 URB2Q14146 1524 aaKnown RBP36.88■■■■□ 3.49
BRD2-216ENST00000581002 PRDM2Q13029 1718 aa36.88■■■■□ 3.49
BRD2-216ENST00000581002 TOPBP1Q92547 1522 aa36.54■■■■□ 3.44
BRD2-216ENST00000581002 ABCC8Q09428 1581 aa36.51■■■■□ 3.44
BRD2-216ENST00000581002 IFT140Q96RY7 1462 aa36.49■■■■□ 3.43
BRD2-216ENST00000581002 OSCARQ8IYS5 282 aa36.45■■■■□ 3.43
BRD2-216ENST00000581002 DNMBPQ6XZF7 1577 aa36.43■■■■□ 3.42
BRD2-216ENST00000581002 ZNF608Q9ULD9 1512 aaPredicted RBP36.4■■■■□ 3.42
BRD2-216ENST00000581002 SUPT5HO00267 1087 aaKnown RBP36.39■■■■□ 3.42
BRD2-216ENST00000581002 TRIM41Q8WV44 630 aa36.35■■■■□ 3.41
BRD2-216ENST00000581002 EIF4G3O43432 1585 aaKnown RBP36.2■■■■□ 3.39
BRD2-216ENST00000581002 POLA1P09884 1462 aaPredicted RBP36.18■■■■□ 3.38
BRD2-216ENST00000581002 AQRO60306 1485 aaKnown RBP eCLIP36.15■■■■□ 3.386e-11■■□□□ 12
BRD2-216ENST00000581002 TARBP1Q13395 1621 aaKnown RBP36.15■■■■□ 3.38
BRD2-216ENST00000581002 SOGA1O94964 1423 aa36.09■■■■□ 3.37
BRD2-216ENST00000581002 RAD54L2Q9Y4B4 1467 aa36.09■■■■□ 3.37
BRD2-216ENST00000581002 FGD5Q6ZNL6 1462 aa36.02■■■■□ 3.36
BRD2-216ENST00000581002 CUX1P39880 1505 aa36.01■■■■□ 3.36
BRD2-216ENST00000581002 FBLN2P98095 1184 aa35.99■■■■□ 3.35
BRD2-216ENST00000581002 TDRD9Q8NDG6 1382 aaKnown RBP35.99■■■■□ 3.35
BRD2-216ENST00000581002 CHD1O14646 1710 aa35.88■■■■□ 3.34
BRD2-216ENST00000581002 RIMBP3CA6NJZ7 1639 aa35.85■■■■□ 3.33
BRD2-216ENST00000581002 RIMBP3BA6NNM3 1639 aa35.85■■■■□ 3.33
BRD2-216ENST00000581002 RIMBP3Q9UFD9 1639 aa35.85■■■■□ 3.33
BRD2-216ENST00000581002 WDR97A6NE52 1622 aa35.8■■■■□ 3.32
BRD2-216ENST00000581002 SNAPC4Q5SXM2 1469 aa35.78■■■■□ 3.32
BRD2-216ENST00000581002 ARHGEF11O15085 1522 aa35.77■■■■□ 3.32
BRD2-216ENST00000581002 CHMP7Q8WUX9 453 aaPredicted RBP35.72■■■■□ 3.31
BRD2-216ENST00000581002 GRIN2BQ13224 1484 aa35.71■■■■□ 3.31
BRD2-216ENST00000581002 MAGI1Q96QZ7 1491 aaPredicted RBP35.67■■■■□ 3.3
BRD2-216ENST00000581002 GAPVD1Q14C86 1478 aa35.64■■■■□ 3.3
BRD2-216ENST00000581002 CYB5RLQ6IPT4 315 aa35.62■■■■□ 3.29
BRD2-216ENST00000581002 ABCA10Q8WWZ4 1543 aa35.6■■■■□ 3.29
BRD2-216ENST00000581002 WRNQ14191 1432 aaPredicted RBP eCLIP35.57■■■■□ 3.29
BRD2-216ENST00000581002 PBRM1Q86U86 1689 aa35.56■■■■□ 3.28
BRD2-216ENST00000581002 SYNJ2O15056 1496 aa35.54■■■■□ 3.28
BRD2-216ENST00000581002 SYNJ1O43426 1573 aa35.52■■■■□ 3.28
BRD2-216ENST00000581002 TOP2BQ02880 1626 aa35.5■■■■□ 3.27
BRD2-216ENST00000581002 ABCA5Q8WWZ7 1642 aa35.49■■■■□ 3.27
BRD2-216ENST00000581002 BIVM-ERCC5R4GMW8 1640 aa35.47■■■■□ 3.27
BRD2-216ENST00000581002 CLASP1Q7Z460 1538 aa35.43■■■■□ 3.26
BRD2-216ENST00000581002 ARAP1Q96P48 1450 aa35.42■■■■□ 3.26
BRD2-216ENST00000581002 GRIN2AQ12879 1464 aa35.24■■■■□ 3.23
BRD2-216ENST00000581002 ADAMTS12P58397 1594 aa35.22■■■■□ 3.23
BRD2-216ENST00000581002 TRHP20396 242 aaPredicted RBP35.2■■■■□ 3.23
BRD2-216ENST00000581002 FHAD1B1AJZ9 1412 aa35.18■■■■□ 3.22
BRD2-216ENST00000581002 ERICH3Q5RHP9 1530 aa35.16■■■■□ 3.22
BRD2-216ENST00000581002 CEP170Q5SW79 1584 aa35.08■■■■□ 3.21
BRD2-216ENST00000581002 NUP160Q12769 1436 aa35.07■■■■□ 3.21
BRD2-216ENST00000581002 ERCC6L2Q5T890 1561 aa34.94■■■■□ 3.18
BRD2-216ENST00000581002 KIF27Q86VH2 1401 aa34.89■■■■□ 3.18
BRD2-216ENST00000581002 SHROOM2Q13796 1616 aa34.85■■■■□ 3.17
BRD2-216ENST00000581002 JPH4Q96JJ6 628 aa34.83■■■■□ 3.17
BRD2-216ENST00000581002 IGF1RP08069 1367 aa34.81■■■■□ 3.16
BRD2-216ENST00000581002 PRG4Q92954 1404 aaPredicted RBP34.8■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms