RNA–Protein interactions for RNA: ENST00000580977.1

C19orf47-205, Transcript of chromosome 19 open reading frame 47, humanhuman

TSL 4

Gene C19orf47, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf47-205ENST00000580977 NISCHQ9Y2I1 1504 aa37.49■■■■□ 3.59
C19orf47-205ENST00000580977 CCDC180Q9P1Z9 1646 aa33.65■■■□□ 2.98
C19orf47-205ENST00000580977 ABCC9O60706 1549 aa33.38■■■□□ 2.93
C19orf47-205ENST00000580977 RB1CC1Q8TDY2 1594 aa31.92■■■□□ 2.7
C19orf47-205ENST00000580977 NACADO15069 1562 aa31.75■■■□□ 2.67
C19orf47-205ENST00000580977 DCAF8L2P0C7V8 631 aa31.45■■■□□ 2.63
C19orf47-205ENST00000580977 MYO15BQ96JP2 1530 aa31.39■■■□□ 2.62
C19orf47-205ENST00000580977 UNC13AQ9UPW8 1703 aa31.16■■■□□ 2.58
C19orf47-205ENST00000580977 ZCCHC6Q5VYS8 1495 aaKnown RBP31.14■■■□□ 2.57
C19orf47-205ENST00000580977 DNAJC5BQ9UF47 199 aa31.07■■■□□ 2.56
C19orf47-205ENST00000580977 DCAF1Q9Y4B6 1507 aa31.04■■■□□ 2.56
C19orf47-205ENST00000580977 PABPN1Q86U42 306 aaKnown RBP eCLIP31.04■■■□□ 2.56
C19orf47-205ENST00000580977 BICRAQ9NZM4 1560 aa30.94■■■□□ 2.54
C19orf47-205ENST00000580977 SHROOM4Q9ULL8 1493 aa30.66■■■□□ 2.5
C19orf47-205ENST00000580977 SCRIBQ14160 1630 aa30.59■■■□□ 2.49
C19orf47-205ENST00000580977 EIF4G1Q04637 1599 aaKnown RBP30.2■■■□□ 2.42
C19orf47-205ENST00000580977 CC2D2AQ9P2K1 1620 aa30.19■■■□□ 2.42
C19orf47-205ENST00000580977 CECR2Q9BXF3 1484 aa30.07■■■□□ 2.4
C19orf47-205ENST00000580977 NCAPD3P42695 1498 aa29.28■■■□□ 2.28
C19orf47-205ENST00000580977 SMARCA4P51532 1647 aa29.23■■■□□ 2.27
C19orf47-205ENST00000580977 ATAD2BQ9ULI0 1458 aa29.19■■■□□ 2.26
C19orf47-205ENST00000580977 SMARCA2P51531 1590 aa29.17■■■□□ 2.26
C19orf47-205ENST00000580977 BAZ1AQ9NRL2 1556 aaPredicted RBP29.13■■■□□ 2.25
C19orf47-205ENST00000580977 HMGXB3Q12766 1538 aa29.11■■■□□ 2.25
C19orf47-205ENST00000580977 PEG3Q9GZU2 1588 aa28.97■■■□□ 2.23
C19orf47-205ENST00000580977 BAZ1BQ9UIG0 1483 aaKnown RBP28.94■■■□□ 2.22
C19orf47-205ENST00000580977 MROH2BQ7Z745 1585 aa28.86■■■□□ 2.21
C19orf47-205ENST00000580977 ERCC6Q03468 1493 aa28.85■■■□□ 2.21
C19orf47-205ENST00000580977 CUX2O14529 1486 aa28.78■■■□□ 2.2
C19orf47-205ENST00000580977 NESP48681 1621 aa28.7■■■□□ 2.19
C19orf47-205ENST00000580977 LAMC3Q9Y6N6 1575 aa28.62■■■□□ 2.17
C19orf47-205ENST00000580977 WIZO95785 1651 aa28.52■■■□□ 2.16
C19orf47-205ENST00000580977 DNAJC5Q9H3Z4 198 aa28.48■■■□□ 2.15
C19orf47-205ENST00000580977 THOC2Q8NI27 1593 aaKnown RBP28.46■■■□□ 2.15
C19orf47-205ENST00000580977 PDS5BQ9NTI5 1447 aa28.43■■■□□ 2.14
C19orf47-205ENST00000580977 KIF21AQ7Z4S6 1674 aa28.39■■■□□ 2.14
C19orf47-205ENST00000580977 CADPSQ9ULU8 1353 aa28.37■■■□□ 2.13
C19orf47-205ENST00000580977 RSF1Q96T23 1441 aaPredicted RBP28.33■■■□□ 2.13
C19orf47-205ENST00000580977 TOP2AP11388 1531 aaKnown RBP28.23■■■□□ 2.11
C19orf47-205ENST00000580977 MRC2Q9UBG0 1479 aa28.18■■■□□ 2.1
C19orf47-205ENST00000580977 WDR62O43379 1518 aa28.12■■■□□ 2.09
C19orf47-205ENST00000580977 CFTRP13569 1480 aa28.1■■■□□ 2.09
C19orf47-205ENST00000580977 CEP164Q9UPV0 1460 aa28.1■■■□□ 2.09
C19orf47-205ENST00000580977 FANCD2Q9BXW9 1451 aa28.06■■■□□ 2.08
C19orf47-205ENST00000580977 PRDM2Q13029 1718 aa27.89■■■□□ 2.06
C19orf47-205ENST00000580977 CCDC88BA6NC98 1476 aa27.84■■■□□ 2.05
C19orf47-205ENST00000580977 URB2Q14146 1524 aaKnown RBP27.8■■■□□ 2.04
C19orf47-205ENST00000580977 TOPBP1Q92547 1522 aa27.55■■■□□ 2
C19orf47-205ENST00000580977 ABCC8Q09428 1581 aa27.55■■■□□ 2
C19orf47-205ENST00000580977 IFT140Q96RY7 1462 aa27.53■■■□□ 2
C19orf47-205ENST00000580977 DNMBPQ6XZF7 1577 aa27.49■■□□□ 1.99
C19orf47-205ENST00000580977 ZNF608Q9ULD9 1512 aaPredicted RBP27.41■■□□□ 1.98
C19orf47-205ENST00000580977 OSCARQ8IYS5 282 aa27.41■■□□□ 1.98
C19orf47-205ENST00000580977 EIF4G3O43432 1585 aaKnown RBP27.34■■□□□ 1.97
C19orf47-205ENST00000580977 TARBP1Q13395 1621 aaKnown RBP27.3■■□□□ 1.96
C19orf47-205ENST00000580977 POLA1P09884 1462 aaPredicted RBP27.27■■□□□ 1.96
C19orf47-205ENST00000580977 TRIM41Q8WV44 630 aa27.27■■□□□ 1.96
C19orf47-205ENST00000580977 AQRO60306 1485 aaKnown RBP eCLIP27.17■■□□□ 1.94
C19orf47-205ENST00000580977 SOGA1O94964 1423 aa27.13■■□□□ 1.93
C19orf47-205ENST00000580977 FGD5Q6ZNL6 1462 aa27.13■■□□□ 1.93
C19orf47-205ENST00000580977 RAD54L2Q9Y4B4 1467 aa27.13■■□□□ 1.93
C19orf47-205ENST00000580977 WDR97A6NE52 1622 aa27.12■■□□□ 1.93
C19orf47-205ENST00000580977 CUX1P39880 1505 aa27.12■■□□□ 1.93
C19orf47-205ENST00000580977 SUPT5HO00267 1087 aaKnown RBP27.1■■□□□ 1.93
C19orf47-205ENST00000580977 CHD1O14646 1710 aa27.09■■□□□ 1.93
C19orf47-205ENST00000580977 RIMBP3CA6NJZ7 1639 aa27.08■■□□□ 1.93
C19orf47-205ENST00000580977 RIMBP3BA6NNM3 1639 aa27.08■■□□□ 1.93
C19orf47-205ENST00000580977 RIMBP3Q9UFD9 1639 aa27.08■■□□□ 1.93
C19orf47-205ENST00000580977 TDRD9Q8NDG6 1382 aaKnown RBP27.02■■□□□ 1.92
C19orf47-205ENST00000580977 ARHGEF11O15085 1522 aa27.01■■□□□ 1.91
C19orf47-205ENST00000580977 SNAPC4Q5SXM2 1469 aa26.95■■□□□ 1.91
C19orf47-205ENST00000580977 FBLN2P98095 1184 aa26.93■■□□□ 1.9
C19orf47-205ENST00000580977 MAGI1Q96QZ7 1491 aaPredicted RBP26.93■■□□□ 1.9
C19orf47-205ENST00000580977 GRIN2BQ13224 1484 aa26.92■■□□□ 1.9
C19orf47-205ENST00000580977 ABCA10Q8WWZ4 1543 aa26.85■■□□□ 1.89
C19orf47-205ENST00000580977 PBRM1Q86U86 1689 aa26.84■■□□□ 1.89
C19orf47-205ENST00000580977 GAPVD1Q14C86 1478 aa26.83■■□□□ 1.89
C19orf47-205ENST00000580977 SYNJ2O15056 1496 aa26.81■■□□□ 1.88
C19orf47-205ENST00000580977 SYNJ1O43426 1573 aa26.81■■□□□ 1.88
C19orf47-205ENST00000580977 ABCA5Q8WWZ7 1642 aa26.81■■□□□ 1.88
C19orf47-205ENST00000580977 CHMP7Q8WUX9 453 aaPredicted RBP26.8■■□□□ 1.88
C19orf47-205ENST00000580977 CLASP1Q7Z460 1538 aa26.8■■□□□ 1.88
C19orf47-205ENST00000580977 BIVM-ERCC5R4GMW8 1640 aa26.78■■□□□ 1.88
C19orf47-205ENST00000580977 TOP2BQ02880 1626 aa26.76■■□□□ 1.87
C19orf47-205ENST00000580977 WRNQ14191 1432 aaPredicted RBP eCLIP26.76■■□□□ 1.87
C19orf47-205ENST00000580977 ARAP1Q96P48 1450 aa26.75■■□□□ 1.87
C19orf47-205ENST00000580977 CYB5RLQ6IPT4 315 aa26.72■■□□□ 1.87
C19orf47-205ENST00000580977 ADAMTS12P58397 1594 aa26.6■■□□□ 1.85
C19orf47-205ENST00000580977 GRIN2AQ12879 1464 aa26.57■■□□□ 1.84
C19orf47-205ENST00000580977 ERICH3Q5RHP9 1530 aa26.54■■□□□ 1.84
C19orf47-205ENST00000580977 FHAD1B1AJZ9 1412 aa26.51■■□□□ 1.83
C19orf47-205ENST00000580977 NUP160Q12769 1436 aa26.48■■□□□ 1.83
C19orf47-205ENST00000580977 CEP170Q5SW79 1584 aa26.46■■□□□ 1.83
C19orf47-205ENST00000580977 TRHP20396 242 aaPredicted RBP26.39■■□□□ 1.82
C19orf47-205ENST00000580977 SHROOM2Q13796 1616 aa26.36■■□□□ 1.81
C19orf47-205ENST00000580977 ERCC6L2Q5T890 1561 aa26.33■■□□□ 1.8
C19orf47-205ENST00000580977 KIF27Q86VH2 1401 aa26.24■■□□□ 1.79
C19orf47-205ENST00000580977 RUSC2Q8N2Y8 1516 aa26.23■■□□□ 1.79
C19orf47-205ENST00000580977 CUL7Q14999 1698 aa26.2■■□□□ 1.78
C19orf47-205ENST00000580977 PRG4Q92954 1404 aaPredicted RBP26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms