RNA–Protein interactions for RNA: ENST00000580934.1

SPECC1-214, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 4

Gene SPECC1, Length 462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-214ENST00000580934 NISCHQ9Y2I1 1504 aa35.54■■■■□ 3.28
SPECC1-214ENST00000580934 ABCC9O60706 1549 aa32.2■■■□□ 2.74
SPECC1-214ENST00000580934 CCDC180Q9P1Z9 1646 aa32■■■□□ 2.71
SPECC1-214ENST00000580934 RB1CC1Q8TDY2 1594 aa30.56■■■□□ 2.48
SPECC1-214ENST00000580934 DNAJC5BQ9UF47 199 aa30.48■■■□□ 2.47
SPECC1-214ENST00000580934 NACADO15069 1562 aa30.32■■■□□ 2.44
SPECC1-214ENST00000580934 DCAF8L2P0C7V8 631 aa29.97■■■□□ 2.39
SPECC1-214ENST00000580934 PABPN1Q86U42 306 aaKnown RBP eCLIP29.93■■■□□ 2.38
SPECC1-214ENST00000580934 UNC13AQ9UPW8 1703 aa29.88■■■□□ 2.37
SPECC1-214ENST00000580934 MYO15BQ96JP2 1530 aa29.86■■■□□ 2.37
SPECC1-214ENST00000580934 BICRAQ9NZM4 1560 aa29.73■■■□□ 2.35
SPECC1-214ENST00000580934 ZCCHC6Q5VYS8 1495 aaKnown RBP29.41■■■□□ 2.3
SPECC1-214ENST00000580934 DCAF1Q9Y4B6 1507 aa29.38■■■□□ 2.29
SPECC1-214ENST00000580934 SHROOM4Q9ULL8 1493 aa29.32■■■□□ 2.28
SPECC1-214ENST00000580934 CC2D2AQ9P2K1 1620 aa29.1■■■□□ 2.25
SPECC1-214ENST00000580934 SCRIBQ14160 1630 aa29.09■■■□□ 2.25
SPECC1-214ENST00000580934 CECR2Q9BXF3 1484 aa29.05■■■□□ 2.24
SPECC1-214ENST00000580934 EIF4G1Q04637 1599 aaKnown RBP28.99■■■□□ 2.23
SPECC1-214ENST00000580934 DNAJC5Q9H3Z4 198 aa28.17■■■□□ 2.1
SPECC1-214ENST00000580934 NCAPD3P42695 1498 aa28.01■■■□□ 2.07
SPECC1-214ENST00000580934 CUX2O14529 1486 aa27.9■■■□□ 2.06
SPECC1-214ENST00000580934 ATAD2BQ9ULI0 1458 aa27.88■■■□□ 2.05
SPECC1-214ENST00000580934 ERCC6Q03468 1493 aa27.8■■■□□ 2.04
SPECC1-214ENST00000580934 SMARCA4P51532 1647 aa27.77■■■□□ 2.04
SPECC1-214ENST00000580934 HMGXB3Q12766 1538 aa27.77■■■□□ 2.04
SPECC1-214ENST00000580934 SMARCA2P51531 1590 aa27.76■■■□□ 2.03
SPECC1-214ENST00000580934 NESP48681 1621 aa27.6■■■□□ 2.01
SPECC1-214ENST00000580934 BAZ1AQ9NRL2 1556 aaPredicted RBP27.58■■■□□ 2.01
SPECC1-214ENST00000580934 BAZ1BQ9UIG0 1483 aaKnown RBP27.55■■■□□ 2
SPECC1-214ENST00000580934 PEG3Q9GZU2 1588 aa27.54■■■□□ 2
SPECC1-214ENST00000580934 THOC2Q8NI27 1593 aaKnown RBP27.41■■□□□ 1.98
SPECC1-214ENST00000580934 LAMC3Q9Y6N6 1575 aa27.39■■□□□ 1.98
SPECC1-214ENST00000580934 MROH2BQ7Z745 1585 aa27.37■■□□□ 1.97
SPECC1-214ENST00000580934 KIF21AQ7Z4S6 1674 aa27.23■■□□□ 1.95
SPECC1-214ENST00000580934 PDS5BQ9NTI5 1447 aa27.23■■□□□ 1.95
SPECC1-214ENST00000580934 CADPSQ9ULU8 1353 aa27.12■■□□□ 1.93
SPECC1-214ENST00000580934 MRC2Q9UBG0 1479 aa27.01■■□□□ 1.91
SPECC1-214ENST00000580934 WIZO95785 1651 aa27.01■■□□□ 1.91
SPECC1-214ENST00000580934 WDR62O43379 1518 aa26.98■■□□□ 1.91
SPECC1-214ENST00000580934 CEP164Q9UPV0 1460 aa26.84■■□□□ 1.89
SPECC1-214ENST00000580934 FANCD2Q9BXW9 1451 aa26.8■■□□□ 1.88
SPECC1-214ENST00000580934 CFTRP13569 1480 aa26.77■■□□□ 1.88
SPECC1-214ENST00000580934 TRIM41Q8WV44 630 aa26.74■■□□□ 1.87
SPECC1-214ENST00000580934 RSF1Q96T23 1441 aaPredicted RBP26.72■■□□□ 1.87
SPECC1-214ENST00000580934 TOP2AP11388 1531 aaKnown RBP26.66■■□□□ 1.86
SPECC1-214ENST00000580934 URB2Q14146 1524 aaKnown RBP26.61■■□□□ 1.85
SPECC1-214ENST00000580934 OSCARQ8IYS5 282 aa26.54■■□□□ 1.84
SPECC1-214ENST00000580934 PRDM2Q13029 1718 aa26.45■■□□□ 1.82
SPECC1-214ENST00000580934 CCDC88BA6NC98 1476 aa26.37■■□□□ 1.81
SPECC1-214ENST00000580934 IFT140Q96RY7 1462 aa26.33■■□□□ 1.81
SPECC1-214ENST00000580934 ZNF608Q9ULD9 1512 aaPredicted RBP26.32■■□□□ 1.8
SPECC1-214ENST00000580934 TOPBP1Q92547 1522 aa26.27■■□□□ 1.8
SPECC1-214ENST00000580934 RIMBP3CA6NJZ7 1639 aa26.25■■□□□ 1.79
SPECC1-214ENST00000580934 RIMBP3BA6NNM3 1639 aa26.25■■□□□ 1.79
SPECC1-214ENST00000580934 RIMBP3Q9UFD9 1639 aa26.25■■□□□ 1.79
SPECC1-214ENST00000580934 ABCC8Q09428 1581 aa26.2■■□□□ 1.78
SPECC1-214ENST00000580934 EIF4G3O43432 1585 aaKnown RBP26.15■■□□□ 1.78
SPECC1-214ENST00000580934 DNMBPQ6XZF7 1577 aa26.15■■□□□ 1.78
SPECC1-214ENST00000580934 ARHGEF11O15085 1522 aa26.14■■□□□ 1.78
SPECC1-214ENST00000580934 TARBP1Q13395 1621 aaKnown RBP26.08■■□□□ 1.77
SPECC1-214ENST00000580934 SUPT5HO00267 1087 aaKnown RBP26.08■■□□□ 1.77
SPECC1-214ENST00000580934 AQRO60306 1485 aaKnown RBP eCLIP26.03■■□□□ 1.76
SPECC1-214ENST00000580934 POLA1P09884 1462 aaPredicted RBP25.99■■□□□ 1.75
SPECC1-214ENST00000580934 CHD1O14646 1710 aa25.98■■□□□ 1.75
SPECC1-214ENST00000580934 CYB5RLQ6IPT4 315 aa25.92■■□□□ 1.74
SPECC1-214ENST00000580934 ARAP1Q96P48 1450 aa25.88■■□□□ 1.73
SPECC1-214ENST00000580934 RAD54L2Q9Y4B4 1467 aa25.88■■□□□ 1.73
SPECC1-214ENST00000580934 SOGA1O94964 1423 aa25.85■■□□□ 1.73
SPECC1-214ENST00000580934 FBLN2P98095 1184 aa25.84■■□□□ 1.73
SPECC1-214ENST00000580934 TDRD9Q8NDG6 1382 aaKnown RBP25.82■■□□□ 1.72
SPECC1-214ENST00000580934 WDR97A6NE52 1622 aa25.81■■□□□ 1.72
SPECC1-214ENST00000580934 FGD5Q6ZNL6 1462 aa25.77■■□□□ 1.72
SPECC1-214ENST00000580934 SNAPC4Q5SXM2 1469 aa25.76■■□□□ 1.71
SPECC1-214ENST00000580934 CUX1P39880 1505 aa25.73■■□□□ 1.71
SPECC1-214ENST00000580934 CLASP1Q7Z460 1538 aa25.73■■□□□ 1.71
SPECC1-214ENST00000580934 MAGI1Q96QZ7 1491 aaPredicted RBP25.7■■□□□ 1.7
SPECC1-214ENST00000580934 TRHP20396 242 aaPredicted RBP25.67■■□□□ 1.7
SPECC1-214ENST00000580934 GRIN2BQ13224 1484 aa25.66■■□□□ 1.7
SPECC1-214ENST00000580934 SYNJ1O43426 1573 aa25.65■■□□□ 1.7
SPECC1-214ENST00000580934 CHMP7Q8WUX9 453 aaPredicted RBP25.64■■□□□ 1.7
SPECC1-214ENST00000580934 SYNJ2O15056 1496 aa25.61■■□□□ 1.69
SPECC1-214ENST00000580934 GAPVD1Q14C86 1478 aa25.53■■□□□ 1.68
SPECC1-214ENST00000580934 PBRM1Q86U86 1689 aa25.52■■□□□ 1.68
SPECC1-214ENST00000580934 ABCA10Q8WWZ4 1543 aa25.5■■□□□ 1.67
SPECC1-214ENST00000580934 ABCA5Q8WWZ7 1642 aa25.48■■□□□ 1.67
SPECC1-214ENST00000580934 GRIN2AQ12879 1464 aa25.33■■□□□ 1.65
SPECC1-214ENST00000580934 WRNQ14191 1432 aaPredicted RBP eCLIP25.31■■□□□ 1.64
SPECC1-214ENST00000580934 ADAMTS12P58397 1594 aa25.3■■□□□ 1.64
SPECC1-214ENST00000580934 ERCC6L2Q5T890 1561 aa25.29■■□□□ 1.64
SPECC1-214ENST00000580934 NUP160Q12769 1436 aa25.29■■□□□ 1.64
SPECC1-214ENST00000580934 CEP170Q5SW79 1584 aa25.26■■□□□ 1.63
SPECC1-214ENST00000580934 BIVM-ERCC5R4GMW8 1640 aa25.26■■□□□ 1.63
SPECC1-214ENST00000580934 TOP2BQ02880 1626 aa25.24■■□□□ 1.63
SPECC1-214ENST00000580934 FHAD1B1AJZ9 1412 aa25.21■■□□□ 1.63
SPECC1-214ENST00000580934 SHROOM2Q13796 1616 aa25.2■■□□□ 1.62
SPECC1-214ENST00000580934 ERICH3Q5RHP9 1530 aa25.17■■□□□ 1.62
SPECC1-214ENST00000580934 AEBP2Q6ZN18 517 aaPredicted RBP25.09■■□□□ 1.61
SPECC1-214ENST00000580934 PRG4Q92954 1404 aaPredicted RBP25.02■■□□□ 1.6
SPECC1-214ENST00000580934 JPH4Q96JJ6 628 aa24.99■■□□□ 1.59
SPECC1-214ENST00000580934 KIF13AQ9H1H9 1805 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms