RNA–Protein interactions for RNA: ENST00000580920.1

MIR4258-201, Transcript of microRNA 4258, humanhuman

BASIC

Gene MIR4258, Length 91 nt, Biotype miRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR4258-201ENST00000580920 NISCHQ9Y2I1 1504 aa20.68■□□□□ 0.9
MIR4258-201ENST00000580920 ABCC9O60706 1549 aa19.42■□□□□ 0.7
MIR4258-201ENST00000580920 CCDC180Q9P1Z9 1646 aa18.85■□□□□ 0.61
MIR4258-201ENST00000580920 DNAJC5BQ9UF47 199 aa18.69■□□□□ 0.58
MIR4258-201ENST00000580920 RB1CC1Q8TDY2 1594 aa18.18■□□□□ 0.5
MIR4258-201ENST00000580920 PABPN1Q86U42 306 aaKnown RBP eCLIP17.91■□□□□ 0.46
MIR4258-201ENST00000580920 NACADO15069 1562 aa17.89■□□□□ 0.45
MIR4258-201ENST00000580920 UNC13AQ9UPW8 1703 aa17.85■□□□□ 0.45
MIR4258-201ENST00000580920 BICRAQ9NZM4 1560 aa17.76■□□□□ 0.43
MIR4258-201ENST00000580920 DCAF8L2P0C7V8 631 aa17.55■□□□□ 0.4
MIR4258-201ENST00000580920 CECR2Q9BXF3 1484 aa17.52■□□□□ 0.4
MIR4258-201ENST00000580920 CC2D2AQ9P2K1 1620 aa17.51■□□□□ 0.39
MIR4258-201ENST00000580920 DNAJC5Q9H3Z4 198 aa17.49■□□□□ 0.39
MIR4258-201ENST00000580920 MYO15BQ96JP2 1530 aa17.43■□□□□ 0.38
MIR4258-201ENST00000580920 SHROOM4Q9ULL8 1493 aa17.37■□□□□ 0.37
MIR4258-201ENST00000580920 EIF4G1Q04637 1599 aaKnown RBP17.34■□□□□ 0.37
MIR4258-201ENST00000580920 SCRIBQ14160 1630 aa17.2■□□□□ 0.34
MIR4258-201ENST00000580920 ZCCHC6Q5VYS8 1495 aaKnown RBP17.07■□□□□ 0.32
MIR4258-201ENST00000580920 DCAF1Q9Y4B6 1507 aa17.02■□□□□ 0.32
MIR4258-201ENST00000580920 CUX2O14529 1486 aa16.93■□□□□ 0.3
MIR4258-201ENST00000580920 ERCC6Q03468 1493 aa16.76■□□□□ 0.27
MIR4258-201ENST00000580920 NESP48681 1621 aa16.55■□□□□ 0.24
MIR4258-201ENST00000580920 THOC2Q8NI27 1593 aaKnown RBP16.54■□□□□ 0.24
MIR4258-201ENST00000580920 TRIM41Q8WV44 630 aa16.53■□□□□ 0.24
MIR4258-201ENST00000580920 NCAPD3P42695 1498 aa16.51■□□□□ 0.23
MIR4258-201ENST00000580920 ATAD2BQ9ULI0 1458 aa16.42■□□□□ 0.22
MIR4258-201ENST00000580920 HMGXB3Q12766 1538 aa16.41■□□□□ 0.22
MIR4258-201ENST00000580920 SMARCA2P51531 1590 aa16.41■□□□□ 0.22
MIR4258-201ENST00000580920 KIF21AQ7Z4S6 1674 aa16.33■□□□□ 0.2
MIR4258-201ENST00000580920 SMARCA4P51532 1647 aa16.3■□□□□ 0.2
MIR4258-201ENST00000580920 LAMC3Q9Y6N6 1575 aa16.27■□□□□ 0.2
MIR4258-201ENST00000580920 BAZ1BQ9UIG0 1483 aaKnown RBP16.23■□□□□ 0.19
MIR4258-201ENST00000580920 BAZ1AQ9NRL2 1556 aaPredicted RBP16.2■□□□□ 0.18
MIR4258-201ENST00000580920 PEG3Q9GZU2 1588 aa16.13■□□□□ 0.17
MIR4258-201ENST00000580920 PDS5BQ9NTI5 1447 aa16.12■□□□□ 0.17
MIR4258-201ENST00000580920 WDR62O43379 1518 aa16.12■□□□□ 0.17
MIR4258-201ENST00000580920 MRC2Q9UBG0 1479 aa16.11■□□□□ 0.17
MIR4258-201ENST00000580920 RIMBP3CA6NJZ7 1639 aa15.98■□□□□ 0.15
MIR4258-201ENST00000580920 RIMBP3BA6NNM3 1639 aa15.98■□□□□ 0.15
MIR4258-201ENST00000580920 RIMBP3Q9UFD9 1639 aa15.98■□□□□ 0.15
MIR4258-201ENST00000580920 MROH2BQ7Z745 1585 aa15.97■□□□□ 0.15
MIR4258-201ENST00000580920 CADPSQ9ULU8 1353 aa15.96■□□□□ 0.15
MIR4258-201ENST00000580920 CEP164Q9UPV0 1460 aa15.92■□□□□ 0.14
MIR4258-201ENST00000580920 OSCARQ8IYS5 282 aa15.9■□□□□ 0.14
MIR4258-201ENST00000580920 ARHGEF11O15085 1522 aa15.86■□□□□ 0.13
MIR4258-201ENST00000580920 FANCD2Q9BXW9 1451 aa15.85■□□□□ 0.13
MIR4258-201ENST00000580920 URB2Q14146 1524 aaKnown RBP15.81■□□□□ 0.12
MIR4258-201ENST00000580920 WIZO95785 1651 aa15.76■□□□□ 0.11
MIR4258-201ENST00000580920 ZNF608Q9ULD9 1512 aaPredicted RBP15.71■□□□□ 0.11
MIR4258-201ENST00000580920 CFTRP13569 1480 aa15.7■□□□□ 0.1
MIR4258-201ENST00000580920 ARAP1Q96P48 1450 aa15.69■□□□□ 0.1
MIR4258-201ENST00000580920 TRHP20396 242 aaPredicted RBP15.64■□□□□ 0.09
MIR4258-201ENST00000580920 EIF4G3O43432 1585 aaKnown RBP15.63■□□□□ 0.09
MIR4258-201ENST00000580920 CYB5RLQ6IPT4 315 aa15.63■□□□□ 0.09
MIR4258-201ENST00000580920 CHD1O14646 1710 aa15.6■□□□□ 0.09
MIR4258-201ENST00000580920 IFT140Q96RY7 1462 aa15.59■□□□□ 0.09
MIR4258-201ENST00000580920 AEBP2Q6ZN18 517 aaPredicted RBP15.57■□□□□ 0.08
MIR4258-201ENST00000580920 PRDM2Q13029 1718 aa15.54■□□□□ 0.08
MIR4258-201ENST00000580920 TOP2AP11388 1531 aaKnown RBP15.51■□□□□ 0.07
MIR4258-201ENST00000580920 TOPBP1Q92547 1522 aa15.5■□□□□ 0.07
MIR4258-201ENST00000580920 RSF1Q96T23 1441 aaPredicted RBP15.5■□□□□ 0.07
MIR4258-201ENST00000580920 TARBP1Q13395 1621 aaKnown RBP15.43■□□□□ 0.06
MIR4258-201ENST00000580920 AQRO60306 1485 aaKnown RBP eCLIP15.43■□□□□ 0.06
MIR4258-201ENST00000580920 CLASP1Q7Z460 1538 aa15.41■□□□□ 0.06
MIR4258-201ENST00000580920 DNMBPQ6XZF7 1577 aa15.4■□□□□ 0.06
MIR4258-201ENST00000580920 FBLN2P98095 1184 aa15.35■□□□□ 0.05
MIR4258-201ENST00000580920 POLA1P09884 1462 aaPredicted RBP15.32■□□□□ 0.04
MIR4258-201ENST00000580920 SNAPC4Q5SXM2 1469 aa15.31■□□□□ 0.04
MIR4258-201ENST00000580920 ABCC8Q09428 1581 aa15.29■□□□□ 0.04
MIR4258-201ENST00000580920 CCDC88BA6NC98 1476 aa15.29■□□□□ 0.04
MIR4258-201ENST00000580920 SYNJ1O43426 1573 aa15.28■□□□□ 0.04
MIR4258-201ENST00000580920 RAD54L2Q9Y4B4 1467 aa15.27■□□□□ 0.03
MIR4258-201ENST00000580920 TDRD9Q8NDG6 1382 aaKnown RBP15.23■□□□□ 0.03
MIR4258-201ENST00000580920 GAPVD1Q14C86 1478 aa15.22■□□□□ 0.03
MIR4258-201ENST00000580920 MAGI1Q96QZ7 1491 aaPredicted RBP15.18■□□□□ 0.02
MIR4258-201ENST00000580920 WDR97A6NE52 1622 aa15.17■□□□□ 0.02
MIR4258-201ENST00000580920 ERCC6L2Q5T890 1561 aa15.16■□□□□ 0.02
MIR4258-201ENST00000580920 SYNJ2O15056 1496 aa15.14■□□□□ 0.01
MIR4258-201ENST00000580920 SOGA1O94964 1423 aa15.14■□□□□ 0.01
MIR4258-201ENST00000580920 FGD5Q6ZNL6 1462 aa15.14■□□□□ 0.01
MIR4258-201ENST00000580920 CHMP7Q8WUX9 453 aaPredicted RBP15.11■□□□□ 0.01
MIR4258-201ENST00000580920 GRIN2BQ13224 1484 aa15.11■□□□□ 0.01
MIR4258-201ENST00000580920 PBRM1Q86U86 1689 aa15.1■□□□□ 0.01
MIR4258-201ENST00000580920 KIF13AQ9H1H9 1805 aa15.09■□□□□ 0.01
MIR4258-201ENST00000580920 ILDR1Q86SU0 546 aaPredicted RBP15.08■□□□□ 0
MIR4258-201ENST00000580920 CUX1P39880 1505 aa15.06■□□□□ 0
MIR4258-201ENST00000580920 CEP170Q5SW79 1584 aa15.02□□□□□ -0.01
MIR4258-201ENST00000580920 ABCA5Q8WWZ7 1642 aa15□□□□□ -0.01
MIR4258-201ENST00000580920 GRIN2AQ12879 1464 aa14.96□□□□□ -0.01
MIR4258-201ENST00000580920 SHROOM2Q13796 1616 aa14.96□□□□□ -0.01
MIR4258-201ENST00000580920 ADAMTS12P58397 1594 aa14.95□□□□□ -0.02
MIR4258-201ENST00000580920 KDM4FA0A1W2PPD8 638 aa14.93□□□□□ -0.02
MIR4258-201ENST00000580920 NUP160Q12769 1436 aa14.92□□□□□ -0.02
MIR4258-201ENST00000580920 DIP2BQ9P265 1576 aa14.9□□□□□ -0.02
MIR4258-201ENST00000580920 ABCA10Q8WWZ4 1543 aa14.9□□□□□ -0.02
MIR4258-201ENST00000580920 KDM6BO15054 1643 aa14.89□□□□□ -0.03
MIR4258-201ENST00000580920 ABCC10Q5T3U5 1492 aa14.88□□□□□ -0.03
MIR4258-201ENST00000580920 MAPKBP1O60336 1514 aa14.83□□□□□ -0.04
MIR4258-201ENST00000580920 ADCY10Q96PN6 1610 aa14.81□□□□□ -0.04
MIR4258-201ENST00000580920 FAM69CQ0P6D2 419 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms