RNA–Protein interactions for RNA: ENST00000580896.1

MED13-203, Transcript of mediator complex subunit 13, humanhuman

TSL 3

Gene MED13, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED13-203ENST00000580896 NISCHQ9Y2I1 1504 aa21.65■■□□□ 1.06
MED13-203ENST00000580896 CCDC180Q9P1Z9 1646 aa19.33■□□□□ 0.69
MED13-203ENST00000580896 ABCC9O60706 1549 aa18.9■□□□□ 0.62
MED13-203ENST00000580896 RB1CC1Q8TDY2 1594 aa18.17■□□□□ 0.5
MED13-203ENST00000580896 NACADO15069 1562 aa18.15■□□□□ 0.5
MED13-203ENST00000580896 MYO15BQ96JP2 1530 aa18.08■□□□□ 0.48
MED13-203ENST00000580896 ZCCHC6Q5VYS8 1495 aaKnown RBP18.07■□□□□ 0.48
MED13-203ENST00000580896 DCAF1Q9Y4B6 1507 aa17.96■□□□□ 0.47
MED13-203ENST00000580896 DCAF8L2P0C7V8 631 aa17.86■□□□□ 0.45
MED13-203ENST00000580896 UNC13AQ9UPW8 1703 aa17.81■□□□□ 0.44
MED13-203ENST00000580896 BICRAQ9NZM4 1560 aa17.7■□□□□ 0.42
MED13-203ENST00000580896 PABPN1Q86U42 306 aaKnown RBP eCLIP17.57■□□□□ 0.4
MED13-203ENST00000580896 SCRIBQ14160 1630 aa17.57■□□□□ 0.4
MED13-203ENST00000580896 SHROOM4Q9ULL8 1493 aa17.51■□□□□ 0.39
MED13-203ENST00000580896 DNAJC5BQ9UF47 199 aa17.42■□□□□ 0.38
MED13-203ENST00000580896 EIF4G1Q04637 1599 aaKnown RBP17.2■□□□□ 0.34
MED13-203ENST00000580896 CC2D2AQ9P2K1 1620 aa17.13■□□□□ 0.33
MED13-203ENST00000580896 CECR2Q9BXF3 1484 aa17■□□□□ 0.31
MED13-203ENST00000580896 SMARCA4P51532 1647 aa16.83■□□□□ 0.28
MED13-203ENST00000580896 BAZ1AQ9NRL2 1556 aaPredicted RBP16.78■□□□□ 0.28
MED13-203ENST00000580896 NCAPD3P42695 1498 aa16.75■□□□□ 0.27
MED13-203ENST00000580896 ATAD2BQ9ULI0 1458 aa16.74■□□□□ 0.27
MED13-203ENST00000580896 PEG3Q9GZU2 1588 aa16.72■□□□□ 0.27
MED13-203ENST00000580896 SMARCA2P51531 1590 aa16.71■□□□□ 0.27
MED13-203ENST00000580896 HMGXB3Q12766 1538 aa16.7■□□□□ 0.26
MED13-203ENST00000580896 MROH2BQ7Z745 1585 aa16.68■□□□□ 0.26
MED13-203ENST00000580896 BAZ1BQ9UIG0 1483 aaKnown RBP16.57■□□□□ 0.24
MED13-203ENST00000580896 WIZO95785 1651 aa16.48■□□□□ 0.23
MED13-203ENST00000580896 RSF1Q96T23 1441 aaPredicted RBP16.45■□□□□ 0.22
MED13-203ENST00000580896 NESP48681 1621 aa16.36■□□□□ 0.21
MED13-203ENST00000580896 TOP2AP11388 1531 aaKnown RBP16.35■□□□□ 0.21
MED13-203ENST00000580896 LAMC3Q9Y6N6 1575 aa16.31■□□□□ 0.2
MED13-203ENST00000580896 ERCC6Q03468 1493 aa16.25■□□□□ 0.19
MED13-203ENST00000580896 CADPSQ9ULU8 1353 aa16.21■□□□□ 0.19
MED13-203ENST00000580896 THOC2Q8NI27 1593 aaKnown RBP16.2■□□□□ 0.18
MED13-203ENST00000580896 CUX2O14529 1486 aa16.19■□□□□ 0.18
MED13-203ENST00000580896 KIF21AQ7Z4S6 1674 aa16.18■□□□□ 0.18
MED13-203ENST00000580896 CFTRP13569 1480 aa16.15■□□□□ 0.18
MED13-203ENST00000580896 PDS5BQ9NTI5 1447 aa16.14■□□□□ 0.17
MED13-203ENST00000580896 CCDC88BA6NC98 1476 aa16.1■□□□□ 0.17
MED13-203ENST00000580896 WDR62O43379 1518 aa16.04■□□□□ 0.16
MED13-203ENST00000580896 FANCD2Q9BXW9 1451 aa16.04■□□□□ 0.16
MED13-203ENST00000580896 MRC2Q9UBG0 1479 aa16.04■□□□□ 0.16
MED13-203ENST00000580896 PRDM2Q13029 1718 aa16.03■□□□□ 0.16
MED13-203ENST00000580896 CEP164Q9UPV0 1460 aa16.03■□□□□ 0.16
MED13-203ENST00000580896 URB2Q14146 1524 aaKnown RBP15.93■□□□□ 0.14
MED13-203ENST00000580896 TOPBP1Q92547 1522 aa15.8■□□□□ 0.12
MED13-203ENST00000580896 SUPT5HO00267 1087 aaKnown RBP15.79■□□□□ 0.12
MED13-203ENST00000580896 DNMBPQ6XZF7 1577 aa15.79■□□□□ 0.12
MED13-203ENST00000580896 ABCC8Q09428 1581 aa15.75■□□□□ 0.11
MED13-203ENST00000580896 DNAJC5Q9H3Z4 198 aa15.72■□□□□ 0.11
MED13-203ENST00000580896 IFT140Q96RY7 1462 aa15.71■□□□□ 0.1
MED13-203ENST00000580896 TARBP1Q13395 1621 aaKnown RBP15.67■□□□□ 0.1
MED13-203ENST00000580896 POLA1P09884 1462 aaPredicted RBP15.66■□□□□ 0.1
MED13-203ENST00000580896 CUX1P39880 1505 aa15.66■□□□□ 0.1
MED13-203ENST00000580896 ZNF608Q9ULD9 1512 aaPredicted RBP15.66■□□□□ 0.1
MED13-203ENST00000580896 EIF4G3O43432 1585 aaKnown RBP15.62■□□□□ 0.09
MED13-203ENST00000580896 FGD5Q6ZNL6 1462 aa15.6■□□□□ 0.09
MED13-203ENST00000580896 RAD54L2Q9Y4B4 1467 aa15.56■□□□□ 0.08
MED13-203ENST00000580896 WDR97A6NE52 1622 aa15.55■□□□□ 0.08
MED13-203ENST00000580896 SOGA1O94964 1423 aa15.52■□□□□ 0.08
MED13-203ENST00000580896 BIVM-ERCC5R4GMW8 1640 aa15.52■□□□□ 0.08
MED13-203ENST00000580896 SYNJ1O43426 1573 aa15.51■□□□□ 0.07
MED13-203ENST00000580896 AQRO60306 1485 aaKnown RBP eCLIP15.51■□□□□ 0.07
MED13-203ENST00000580896 TOP2BQ02880 1626 aa15.5■□□□□ 0.07
MED13-203ENST00000580896 WRNQ14191 1432 aaPredicted RBP eCLIP15.48■□□□□ 0.07
MED13-203ENST00000580896 ABCA10Q8WWZ4 1543 aa15.47■□□□□ 0.07
MED13-203ENST00000580896 ABCA5Q8WWZ7 1642 aa15.46■□□□□ 0.06
MED13-203ENST00000580896 TDRD9Q8NDG6 1382 aaKnown RBP15.45■□□□□ 0.06
MED13-203ENST00000580896 CHD1O14646 1710 aa15.41■□□□□ 0.06
MED13-203ENST00000580896 SNAPC4Q5SXM2 1469 aa15.4■□□□□ 0.06
MED13-203ENST00000580896 GRIN2BQ13224 1484 aa15.4■□□□□ 0.06
MED13-203ENST00000580896 PBRM1Q86U86 1689 aa15.39■□□□□ 0.05
MED13-203ENST00000580896 MAGI1Q96QZ7 1491 aaPredicted RBP15.39■□□□□ 0.05
MED13-203ENST00000580896 OSCARQ8IYS5 282 aa15.37■□□□□ 0.05
MED13-203ENST00000580896 GAPVD1Q14C86 1478 aa15.37■□□□□ 0.05
MED13-203ENST00000580896 SYNJ2O15056 1496 aa15.32■□□□□ 0.04
MED13-203ENST00000580896 ADAMTS12P58397 1594 aa15.3■□□□□ 0.04
MED13-203ENST00000580896 CLASP1Q7Z460 1538 aa15.3■□□□□ 0.04
MED13-203ENST00000580896 RIMBP3CA6NJZ7 1639 aa15.27■□□□□ 0.03
MED13-203ENST00000580896 RIMBP3BA6NNM3 1639 aa15.27■□□□□ 0.03
MED13-203ENST00000580896 RIMBP3Q9UFD9 1639 aa15.27■□□□□ 0.03
MED13-203ENST00000580896 ERICH3Q5RHP9 1530 aa15.27■□□□□ 0.03
MED13-203ENST00000580896 ARHGEF11O15085 1522 aa15.26■□□□□ 0.03
MED13-203ENST00000580896 GRIN2AQ12879 1464 aa15.21■□□□□ 0.03
MED13-203ENST00000580896 FHAD1B1AJZ9 1412 aa15.2■□□□□ 0.02
MED13-203ENST00000580896 FBLN2P98095 1184 aa15.2■□□□□ 0.02
MED13-203ENST00000580896 CHMP7Q8WUX9 453 aaPredicted RBP15.19■□□□□ 0.02
MED13-203ENST00000580896 NUP160Q12769 1436 aa15.18■□□□□ 0.02
MED13-203ENST00000580896 CEP170Q5SW79 1584 aa15.18■□□□□ 0.02
MED13-203ENST00000580896 ARAP1Q96P48 1450 aa15.14■□□□□ 0.01
MED13-203ENST00000580896 KIF27Q86VH2 1401 aa15.14■□□□□ 0.01
MED13-203ENST00000580896 CUL7Q14999 1698 aa15.12■□□□□ 0.01
MED13-203ENST00000580896 SHROOM2Q13796 1616 aa15.11■□□□□ 0.01
MED13-203ENST00000580896 IGF1RP08069 1367 aa15.11■□□□□ 0.01
MED13-203ENST00000580896 RUSC2Q8N2Y8 1516 aa15.09■□□□□ 0.01
MED13-203ENST00000580896 TRIM41Q8WV44 630 aa15.07■□□□□ 0
MED13-203ENST00000580896 ERCC6L2Q5T890 1561 aa15.05■□□□□ -0
MED13-203ENST00000580896 CARMIL1Q5VZK9 1371 aa14.98□□□□□ -0.01
MED13-203ENST00000580896 CYB5RLQ6IPT4 315 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms