RNA–Protein interactions for RNA: ENST00000580890.5

LPO-208, Transcript of lactoperoxidase, human

TSL 1 (best)

Gene LPO, Length 1,970 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LPO-208	ENST00000580890	NISCH	Q9Y2I1	1504 aa		40.12	■■■■■ 4.01
LPO-208	ENST00000580890	CCDC180	Q9P1Z9	1646 aa		35.02	■■■■□ 3.2
LPO-208	ENST00000580890	ZCCHC6	Q5VYS8	1495 aa	Known RBP	33.71	■■■□□ 2.99
LPO-208	ENST00000580890	DCAF8L2	P0C7V8	631 aa		33.25	■■■□□ 2.91
LPO-208	ENST00000580890	ABCC9	O60706	1549 aa		33.18	■■■□□ 2.9
LPO-208	ENST00000580890	DCAF1	Q9Y4B6	1507 aa		33.12	■■■□□ 2.89
LPO-208	ENST00000580890	SHROOM4	Q9ULL8	1493 aa		32.83	■■■□□ 2.85
LPO-208	ENST00000580890	MYO15B	Q96JP2	1530 aa		32.71	■■■□□ 2.83
LPO-208	ENST00000580890	NACAD	O15069	1562 aa		32.59	■■■□□ 2.81
LPO-208	ENST00000580890	RB1CC1	Q8TDY2	1594 aa		32.35	■■■□□ 2.77
LPO-208	ENST00000580890	SCRIB	Q14160	1630 aa		32.28	■■■□□ 2.76
LPO-208	ENST00000580890	UNC13A	Q9UPW8	1703 aa		31.76	■■■□□ 2.68
LPO-208	ENST00000580890	SUPT5H	O00267	1087 aa	Known RBP	31.56	■■■□□ 2.64
LPO-208	ENST00000580890	BICRA	Q9NZM4	1560 aa		31.36	■■■□□ 2.61
LPO-208	ENST00000580890	PABPN1	Q86U42	306 aa	Known RBP eCLIP	31.27	■■■□□ 2.6
LPO-208	ENST00000580890	CECR2	Q9BXF3	1484 aa		31.2	■■■□□ 2.59
LPO-208	ENST00000580890	RSF1	Q96T23	1441 aa	Predicted RBP	31.11	■■■□□ 2.57
LPO-208	ENST00000580890	MROH2B	Q7Z745	1585 aa		31.02	■■■□□ 2.56
LPO-208	ENST00000580890	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	31.01	■■■□□ 2.55
LPO-208	ENST00000580890	SMARCA4	P51532	1647 aa		30.89	■■■□□ 2.54
LPO-208	ENST00000580890	WIZ	O95785	1651 aa		30.82	■■■□□ 2.52
LPO-208	ENST00000580890	TOP2A	P11388	1531 aa	Known RBP	30.45	■■■□□ 2.47
LPO-208	ENST00000580890	PEG3	Q9GZU2	1588 aa		30.45	■■■□□ 2.46
LPO-208	ENST00000580890	EIF4G1	Q04637	1599 aa	Known RBP	30.44	■■■□□ 2.46
LPO-208	ENST00000580890	SMARCA2	P51531	1590 aa		30.34	■■■□□ 2.45
LPO-208	ENST00000580890	ATAD2B	Q9ULI0	1458 aa		30.34	■■■□□ 2.45
LPO-208	ENST00000580890	BAZ1B	Q9UIG0	1483 aa	Known RBP	30.22	■■■□□ 2.43
LPO-208	ENST00000580890	CCDC88B	A6NC98	1476 aa		30.12	■■■□□ 2.41
LPO-208	ENST00000580890	CHIC1	Q5VXU3	224 aa		30.12	■■■□□ 2.41
LPO-208	ENST00000580890	HMGXB3	Q12766	1538 aa		30.05	■■■□□ 2.4
LPO-208	ENST00000580890	NCAPD3	P42695	1498 aa		30.04	■■■□□ 2.4
LPO-208	ENST00000580890	CC2D2A	Q9P2K1	1620 aa		30.01	■■■□□ 2.39
LPO-208	ENST00000580890	TRIM41	Q8WV44	630 aa		29.64	■■■□□ 2.34
LPO-208	ENST00000580890	ABCC8	Q09428	1581 aa		29.56	■■■□□ 2.32
LPO-208	ENST00000580890	CFTR	P13569	1480 aa		29.4	■■■□□ 2.3
LPO-208	ENST00000580890	PRDM2	Q13029	1718 aa		29.35	■■■□□ 2.29
LPO-208	ENST00000580890	WRN	Q14191	1432 aa	Predicted RBP eCLIP	29.32	■■■□□ 2.28
LPO-208	ENST00000580890	DNAJC5B	Q9UF47	199 aa		29.32	■■■□□ 2.28
LPO-208	ENST00000580890	CADPS	Q9ULU8	1353 aa		29.3	■■■□□ 2.28
LPO-208	ENST00000580890	SYNJ1	O43426	1573 aa		29.23	■■■□□ 2.27
LPO-208	ENST00000580890	FAM9A	Q8IZU1	332 aa	Predicted RBP	29.15	■■■□□ 2.26
LPO-208	ENST00000580890	NES	P48681	1621 aa		29.12	■■■□□ 2.25
LPO-208	ENST00000580890	LAMC3	Q9Y6N6	1575 aa		29.09	■■■□□ 2.25
LPO-208	ENST00000580890	TOP2B	Q02880	1626 aa		29.08	■■■□□ 2.25
LPO-208	ENST00000580890	BIVM-ERCC5	R4GMW8	1640 aa		29.06	■■■□□ 2.24
LPO-208	ENST00000580890	FANCD2	Q9BXW9	1451 aa		29.02	■■■□□ 2.24
LPO-208	ENST00000580890	CUX1	P39880	1505 aa		29.01	■■■□□ 2.23
LPO-208	ENST00000580890	LOC105371045	A0A1W2PR82	267 aa		29.01	■■■□□ 2.23
LPO-208	ENST00000580890	SOGA1	O94964	1423 aa		28.95	■■■□□ 2.22
LPO-208	ENST00000580890	CEP164	Q9UPV0	1460 aa		28.86	■■■□□ 2.21
LPO-208	ENST00000580890	EEA1	Q15075	1411 aa		28.85	■■■□□ 2.21
LPO-208	ENST00000580890	RUSC2	Q8N2Y8	1516 aa		28.85	■■■□□ 2.21
LPO-208	ENST00000580890	PDS5B	Q9NTI5	1447 aa		28.85	■■■□□ 2.21
LPO-208	ENST00000580890	KIF21A	Q7Z4S6	1674 aa		28.81	■■■□□ 2.2
LPO-208	ENST00000580890	EHMT2	Q96KQ7	1210 aa		28.81	■■■□□ 2.2
LPO-208	ENST00000580890	DNMBP	Q6XZF7	1577 aa		28.76	■■■□□ 2.19
LPO-208	ENST00000580890	FGD5	Q6ZNL6	1462 aa		28.71	■■■□□ 2.19
LPO-208	ENST00000580890	TOPBP1	Q92547	1522 aa		28.7	■■■□□ 2.19
LPO-208	ENST00000580890	CSRNP3	Q8WYN3	585 aa		28.7	■■■□□ 2.19
LPO-208	ENST00000580890	URB2	Q14146	1524 aa	Known RBP	28.65	■■■□□ 2.18
LPO-208	ENST00000580890	KIF27	Q86VH2	1401 aa		28.57	■■■□□ 2.16
LPO-208	ENST00000580890	POLA1	P09884	1462 aa	Predicted RBP	28.57	■■■□□ 2.16
LPO-208	ENST00000580890	CUX2	O14529	1486 aa		28.53	■■■□□ 2.16
LPO-208	ENST00000580890	KIF21B	O75037	1637 aa		28.52	■■■□□ 2.16
LPO-208	ENST00000580890	GOLGA3	Q08378	1498 aa		28.5	■■■□□ 2.15
LPO-208	ENST00000580890	MRC2	Q9UBG0	1479 aa		28.49	■■■□□ 2.15
LPO-208	ENST00000580890	RAD54L2	Q9Y4B4	1467 aa		28.48	■■■□□ 2.15
LPO-208	ENST00000580890	ERCC6	Q03468	1493 aa		28.47	■■■□□ 2.15
LPO-208	ENST00000580890	ABCA10	Q8WWZ4	1543 aa		28.42	■■■□□ 2.14
LPO-208	ENST00000580890	UBTF	P17480	764 aa	Known RBP	28.41	■■■□□ 2.14
LPO-208	ENST00000580890	WDR97	A6NE52	1622 aa		28.38	■■■□□ 2.13
LPO-208	ENST00000580890	RAPGEF2	Q9Y4G8	1499 aa		28.38	■■■□□ 2.13
LPO-208	ENST00000580890	TNIK	Q9UKE5	1360 aa		28.36	■■■□□ 2.13
LPO-208	ENST00000580890	PRX	Q9BXM0	1461 aa		28.34	■■■□□ 2.13
LPO-208	ENST00000580890	WDR62	O43379	1518 aa		28.34	■■■□□ 2.13
LPO-208	ENST00000580890	ERICH3	Q5RHP9	1530 aa		28.32	■■■□□ 2.12
LPO-208	ENST00000580890	THOC2	Q8NI27	1593 aa	Known RBP	28.29	■■■□□ 2.12
LPO-208	ENST00000580890	IGF1R	P08069	1367 aa		28.27	■■■□□ 2.12
LPO-208	ENST00000580890	TARBP1	Q13395	1621 aa	Known RBP	28.27	■■■□□ 2.12
LPO-208	ENST00000580890	CEP162	Q5TB80	1403 aa		28.26	■■■□□ 2.11
LPO-208	ENST00000580890	ABCA5	Q8WWZ7	1642 aa		28.23	■■■□□ 2.11
LPO-208	ENST00000580890	TDRD9	Q8NDG6	1382 aa	Known RBP	28.2	■■■□□ 2.11
LPO-208	ENST00000580890	CARMIL1	Q5VZK9	1371 aa		28.17	■■■□□ 2.1
LPO-208	ENST00000580890	GAPVD1	Q14C86	1478 aa		28.16	■■■□□ 2.1
LPO-208	ENST00000580890	CUL7	Q14999	1698 aa		28.14	■■■□□ 2.09
LPO-208	ENST00000580890	IFT140	Q96RY7	1462 aa		28.13	■■■□□ 2.09
LPO-208	ENST00000580890	PBRM1	Q86U86	1689 aa		28.07	■■■□□ 2.08
LPO-208	ENST00000580890	CLIP1	P30622	1438 aa		28.05	■■■□□ 2.08
LPO-208	ENST00000580890	AQR	O60306	1485 aa	Known RBP eCLIP	28.02	■■■□□ 2.08
LPO-208	ENST00000580890	RANGAP1	P46060	587 aa	Predicted RBP	28.02	■■■□□ 2.08
LPO-208	ENST00000580890	ZNF608	Q9ULD9	1512 aa	Predicted RBP	28.01	■■■□□ 2.07
LPO-208	ENST00000580890	EIF4G3	O43432	1585 aa	Known RBP	27.95	■■■□□ 2.07
LPO-208	ENST00000580890	GRIN2B	Q13224	1484 aa		27.93	■■■□□ 2.06
LPO-208	ENST00000580890	ADAMTS12	P58397	1594 aa		27.88	■■■□□ 2.05
LPO-208	ENST00000580890	CTTNBP2	Q8WZ74	1663 aa		27.87	■■■□□ 2.05
LPO-208	ENST00000580890	FHAD1	B1AJZ9	1412 aa		27.83	■■■□□ 2.05
LPO-208	ENST00000580890	SNAPC4	Q5SXM2	1469 aa		27.78	■■■□□ 2.04
LPO-208	ENST00000580890	VPS8	Q8N3P4	1428 aa		27.78	■■■□□ 2.04
LPO-208	ENST00000580890	ARAP1	Q96P48	1450 aa		27.77	■■■□□ 2.04
LPO-208	ENST00000580890	ARHGAP35	Q9NRY4	1499 aa		27.76	■■■□□ 2.03

Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms