RNA–Protein interactions for RNA: ENST00000580879.5

NUP85-215, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-215ENST00000580879 NISCHQ9Y2I1 1504 aa32.27■■■□□ 2.76
NUP85-215ENST00000580879 CCDC180Q9P1Z9 1646 aa28.65■■■□□ 2.18
NUP85-215ENST00000580879 ABCC9O60706 1549 aa28.23■■■□□ 2.11
NUP85-215ENST00000580879 DCAF8L2P0C7V8 631 aa27.11■■□□□ 1.93
NUP85-215ENST00000580879 RB1CC1Q8TDY2 1594 aa27.03■■□□□ 1.92
NUP85-215ENST00000580879 NACADO15069 1562 aa26.97■■□□□ 1.91
NUP85-215ENST00000580879 ZCCHC6Q5VYS8 1495 aaKnown RBP26.87■■□□□ 1.89
NUP85-215ENST00000580879 MYO15BQ96JP2 1530 aa26.75■■□□□ 1.87
NUP85-215ENST00000580879 DCAF1Q9Y4B6 1507 aa26.64■■□□□ 1.85
NUP85-215ENST00000580879 PABPN1Q86U42 306 aaKnown RBP eCLIP26.41■■□□□ 1.82
NUP85-215ENST00000580879 UNC13AQ9UPW8 1703 aa26.41■■□□□ 1.82
NUP85-215ENST00000580879 SCRIBQ14160 1630 aa26.25■■□□□ 1.79
NUP85-215ENST00000580879 BICRAQ9NZM4 1560 aa26.24■■□□□ 1.79
NUP85-215ENST00000580879 DNAJC5BQ9UF47 199 aa25.98■■□□□ 1.75
NUP85-215ENST00000580879 SHROOM4Q9ULL8 1493 aa25.87■■□□□ 1.73
NUP85-215ENST00000580879 EIF4G1Q04637 1599 aaKnown RBP25.56■■□□□ 1.68
NUP85-215ENST00000580879 CC2D2AQ9P2K1 1620 aa25.47■■□□□ 1.67
NUP85-215ENST00000580879 CECR2Q9BXF3 1484 aa25.34■■□□□ 1.65
NUP85-215ENST00000580879 SMARCA4P51532 1647 aa25.05■■□□□ 1.6
NUP85-215ENST00000580879 BAZ1AQ9NRL2 1556 aaPredicted RBP25■■□□□ 1.59
NUP85-215ENST00000580879 ATAD2BQ9ULI0 1458 aa24.95■■□□□ 1.58
NUP85-215ENST00000580879 NCAPD3P42695 1498 aa24.91■■□□□ 1.58
NUP85-215ENST00000580879 MROH2BQ7Z745 1585 aa24.91■■□□□ 1.58
NUP85-215ENST00000580879 SMARCA2P51531 1590 aa24.87■■□□□ 1.57
NUP85-215ENST00000580879 HMGXB3Q12766 1538 aa24.76■■□□□ 1.55
NUP85-215ENST00000580879 PEG3Q9GZU2 1588 aa24.76■■□□□ 1.55
NUP85-215ENST00000580879 BAZ1BQ9UIG0 1483 aaKnown RBP24.75■■□□□ 1.55
NUP85-215ENST00000580879 WIZO95785 1651 aa24.62■■□□□ 1.53
NUP85-215ENST00000580879 RSF1Q96T23 1441 aaPredicted RBP24.6■■□□□ 1.53
NUP85-215ENST00000580879 NESP48681 1621 aa24.41■■□□□ 1.5
NUP85-215ENST00000580879 TOP2AP11388 1531 aaKnown RBP24.34■■□□□ 1.49
NUP85-215ENST00000580879 ERCC6Q03468 1493 aa24.31■■□□□ 1.48
NUP85-215ENST00000580879 LAMC3Q9Y6N6 1575 aa24.25■■□□□ 1.47
NUP85-215ENST00000580879 CADPSQ9ULU8 1353 aa24.21■■□□□ 1.47
NUP85-215ENST00000580879 PDS5BQ9NTI5 1447 aa24.11■■□□□ 1.45
NUP85-215ENST00000580879 CCDC88BA6NC98 1476 aa24.08■■□□□ 1.45
NUP85-215ENST00000580879 KIF21AQ7Z4S6 1674 aa24.06■■□□□ 1.44
NUP85-215ENST00000580879 CFTRP13569 1480 aa24.04■■□□□ 1.44
NUP85-215ENST00000580879 SUPT5HO00267 1087 aaKnown RBP24.02■■□□□ 1.44
NUP85-215ENST00000580879 CUX2O14529 1486 aa24.01■■□□□ 1.43
NUP85-215ENST00000580879 THOC2Q8NI27 1593 aaKnown RBP23.99■■□□□ 1.43
NUP85-215ENST00000580879 FANCD2Q9BXW9 1451 aa23.94■■□□□ 1.42
NUP85-215ENST00000580879 CEP164Q9UPV0 1460 aa23.91■■□□□ 1.42
NUP85-215ENST00000580879 MRC2Q9UBG0 1479 aa23.88■■□□□ 1.41
NUP85-215ENST00000580879 WDR62O43379 1518 aa23.79■■□□□ 1.4
NUP85-215ENST00000580879 PRDM2Q13029 1718 aa23.78■■□□□ 1.4
NUP85-215ENST00000580879 URB2Q14146 1524 aaKnown RBP23.72■■□□□ 1.39
NUP85-215ENST00000580879 TOPBP1Q92547 1522 aa23.55■■□□□ 1.36
NUP85-215ENST00000580879 DNMBPQ6XZF7 1577 aa23.49■■□□□ 1.35
NUP85-215ENST00000580879 ABCC8Q09428 1581 aa23.48■■□□□ 1.35
NUP85-215ENST00000580879 IFT140Q96RY7 1462 aa23.4■■□□□ 1.34
NUP85-215ENST00000580879 DNAJC5Q9H3Z4 198 aa23.39■■□□□ 1.33
NUP85-215ENST00000580879 CUX1P39880 1505 aa23.36■■□□□ 1.33
NUP85-215ENST00000580879 ZNF608Q9ULD9 1512 aaPredicted RBP23.35■■□□□ 1.33
NUP85-215ENST00000580879 POLA1P09884 1462 aaPredicted RBP23.35■■□□□ 1.33
NUP85-215ENST00000580879 FGD5Q6ZNL6 1462 aa23.3■■□□□ 1.32
NUP85-215ENST00000580879 RAD54L2Q9Y4B4 1467 aa23.3■■□□□ 1.32
NUP85-215ENST00000580879 TARBP1Q13395 1621 aaKnown RBP23.27■■□□□ 1.32
NUP85-215ENST00000580879 SOGA1O94964 1423 aa23.26■■□□□ 1.31
NUP85-215ENST00000580879 AQRO60306 1485 aaKnown RBP eCLIP23.22■■□□□ 1.313e-7■■■■□ 19.7
NUP85-215ENST00000580879 EIF4G3O43432 1585 aaKnown RBP23.21■■□□□ 1.31
NUP85-215ENST00000580879 WRNQ14191 1432 aaPredicted RBP eCLIP23.19■■□□□ 1.3
NUP85-215ENST00000580879 TDRD9Q8NDG6 1382 aaKnown RBP23.17■■□□□ 1.3
NUP85-215ENST00000580879 SYNJ1O43426 1573 aa23.14■■□□□ 1.3
NUP85-215ENST00000580879 TOP2BQ02880 1626 aa23.11■■□□□ 1.29
NUP85-215ENST00000580879 BIVM-ERCC5R4GMW8 1640 aa23.09■■□□□ 1.29
NUP85-215ENST00000580879 OSCARQ8IYS5 282 aa23.05■■□□□ 1.28
NUP85-215ENST00000580879 WDR97A6NE52 1622 aa23.04■■□□□ 1.28
NUP85-215ENST00000580879 ABCA10Q8WWZ4 1543 aa23.03■■□□□ 1.28
NUP85-215ENST00000580879 SNAPC4Q5SXM2 1469 aa22.98■■□□□ 1.27
NUP85-215ENST00000580879 FBLN2P98095 1184 aa22.98■■□□□ 1.27
NUP85-215ENST00000580879 GRIN2BQ13224 1484 aa22.98■■□□□ 1.27
NUP85-215ENST00000580879 GAPVD1Q14C86 1478 aa22.98■■□□□ 1.27
NUP85-215ENST00000580879 ABCA5Q8WWZ7 1642 aa22.94■■□□□ 1.26
NUP85-215ENST00000580879 CHD1O14646 1710 aa22.92■■□□□ 1.26
NUP85-215ENST00000580879 PBRM1Q86U86 1689 aa22.9■■□□□ 1.26
NUP85-215ENST00000580879 MAGI1Q96QZ7 1491 aaPredicted RBP22.9■■□□□ 1.26
NUP85-215ENST00000580879 CHMP7Q8WUX9 453 aaPredicted RBP22.87■■□□□ 1.25
NUP85-215ENST00000580879 SYNJ2O15056 1496 aa22.83■■□□□ 1.25
NUP85-215ENST00000580879 ADAMTS12P58397 1594 aa22.74■■□□□ 1.23
NUP85-215ENST00000580879 ERICH3Q5RHP9 1530 aa22.73■■□□□ 1.23
NUP85-215ENST00000580879 FHAD1B1AJZ9 1412 aa22.7■■□□□ 1.22
NUP85-215ENST00000580879 KIF27Q86VH2 1401 aa22.7■■□□□ 1.22
NUP85-215ENST00000580879 TRIM41Q8WV44 630 aa22.69■■□□□ 1.22
NUP85-215ENST00000580879 GRIN2AQ12879 1464 aa22.68■■□□□ 1.22
NUP85-215ENST00000580879 RIMBP3CA6NJZ7 1639 aa22.68■■□□□ 1.22
NUP85-215ENST00000580879 RIMBP3BA6NNM3 1639 aa22.68■■□□□ 1.22
NUP85-215ENST00000580879 RIMBP3Q9UFD9 1639 aa22.68■■□□□ 1.22
NUP85-215ENST00000580879 ARHGEF11O15085 1522 aa22.67■■□□□ 1.22
NUP85-215ENST00000580879 CLASP1Q7Z460 1538 aa22.67■■□□□ 1.22
NUP85-215ENST00000580879 IGF1RP08069 1367 aa22.63■■□□□ 1.21
NUP85-215ENST00000580879 CEP170Q5SW79 1584 aa22.59■■□□□ 1.21
NUP85-215ENST00000580879 NUP160Q12769 1436 aa22.57■■□□□ 1.2
NUP85-215ENST00000580879 RUSC2Q8N2Y8 1516 aa22.54■■□□□ 1.2
NUP85-215ENST00000580879 CYB5RLQ6IPT4 315 aa22.52■■□□□ 1.2
NUP85-215ENST00000580879 ARAP1Q96P48 1450 aa22.51■■□□□ 1.19
NUP85-215ENST00000580879 CUL7Q14999 1698 aa22.51■■□□□ 1.19
NUP85-215ENST00000580879 CARMIL1Q5VZK9 1371 aa22.5■■□□□ 1.19
NUP85-215ENST00000580879 ERCC6L2Q5T890 1561 aa22.42■■□□□ 1.18
NUP85-215ENST00000580879 SHROOM2Q13796 1616 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms