RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 NISCHQ9Y2I1 1504 aa48.72■■■■■ 5.39
NDEL1-209ENST00000580738 ABCC9O60706 1549 aa44.5■■■■■ 4.71
NDEL1-209ENST00000580738 CCDC180Q9P1Z9 1646 aa43.83■■■■■ 4.61
NDEL1-209ENST00000580738 DNAJC5BQ9UF47 199 aa42.3■■■■■ 4.36
NDEL1-209ENST00000580738 RB1CC1Q8TDY2 1594 aa42.03■■■■■ 4.32
NDEL1-209ENST00000580738 NACADO15069 1562 aa41.61■■■■■ 4.25
NDEL1-209ENST00000580738 DCAF8L2P0C7V8 631 aa41.46■■■■■ 4.23
NDEL1-209ENST00000580738 PABPN1Q86U42 306 aaKnown RBP eCLIP41.41■■■■■ 4.22
NDEL1-209ENST00000580738 UNC13AQ9UPW8 1703 aa41.04■■■■■ 4.16
NDEL1-209ENST00000580738 BICRAQ9NZM4 1560 aa40.88■■■■■ 4.13
NDEL1-209ENST00000580738 MYO15BQ96JP2 1530 aa40.85■■■■■ 4.13
NDEL1-209ENST00000580738 ZCCHC6Q5VYS8 1495 aaKnown RBP40.25■■■■■ 4.03
NDEL1-209ENST00000580738 SHROOM4Q9ULL8 1493 aa40.17■■■■■ 4.02
NDEL1-209ENST00000580738 DCAF1Q9Y4B6 1507 aa40.15■■■■■ 4.02
NDEL1-209ENST00000580738 CECR2Q9BXF3 1484 aa40.12■■■■■ 4.01
NDEL1-209ENST00000580738 CC2D2AQ9P2K1 1620 aa40.11■■■■■ 4.01
NDEL1-209ENST00000580738 SCRIBQ14160 1630 aa40.01■■■■■ 4
NDEL1-209ENST00000580738 EIF4G1Q04637 1599 aaKnown RBP39.9■■■■□ 3.98
NDEL1-209ENST00000580738 DNAJC5Q9H3Z4 198 aa39.16■■■■□ 3.86
NDEL1-209ENST00000580738 CUX2O14529 1486 aa38.48■■■■□ 3.75
NDEL1-209ENST00000580738 NCAPD3P42695 1498 aa38.47■■■■□ 3.75
NDEL1-209ENST00000580738 ERCC6Q03468 1493 aa38.41■■■■□ 3.74
NDEL1-209ENST00000580738 ATAD2BQ9ULI0 1458 aa38.29■■■■□ 3.72
NDEL1-209ENST00000580738 SMARCA2P51531 1590 aa38.1■■■■□ 3.69
NDEL1-209ENST00000580738 NESP48681 1621 aa38.09■■■■□ 3.69
NDEL1-209ENST00000580738 HMGXB3Q12766 1538 aa38.09■■■■□ 3.69
NDEL1-209ENST00000580738 SMARCA4P51532 1647 aa38.08■■■■□ 3.69
NDEL1-209ENST00000580738 BAZ1BQ9UIG0 1483 aaKnown RBP37.88■■■■□ 3.65
NDEL1-209ENST00000580738 BAZ1AQ9NRL2 1556 aaPredicted RBP37.81■■■■□ 3.64
NDEL1-209ENST00000580738 THOC2Q8NI27 1593 aaKnown RBP37.72■■■■□ 3.63
NDEL1-209ENST00000580738 PEG3Q9GZU2 1588 aa37.7■■■■□ 3.63
NDEL1-209ENST00000580738 LAMC3Q9Y6N6 1575 aa37.63■■■■□ 3.62
NDEL1-209ENST00000580738 MROH2BQ7Z745 1585 aa37.57■■■■□ 3.6
NDEL1-209ENST00000580738 KIF21AQ7Z4S6 1674 aa37.49■■■■□ 3.59
NDEL1-209ENST00000580738 PDS5BQ9NTI5 1447 aa37.48■■■■□ 3.59
NDEL1-209ENST00000580738 CADPSQ9ULU8 1353 aa37.3■■■■□ 3.56
NDEL1-209ENST00000580738 TRIM41Q8WV44 630 aa37.25■■■■□ 3.55
NDEL1-209ENST00000580738 MRC2Q9UBG0 1479 aa37.19■■■■□ 3.54
NDEL1-209ENST00000580738 WDR62O43379 1518 aa37.1■■■■□ 3.53
NDEL1-209ENST00000580738 WIZO95785 1651 aa37.05■■■■□ 3.52
NDEL1-209ENST00000580738 CEP164Q9UPV0 1460 aa36.93■■■■□ 3.5
NDEL1-209ENST00000580738 FANCD2Q9BXW9 1451 aa36.87■■■■□ 3.49
NDEL1-209ENST00000580738 CFTRP13569 1480 aa36.75■■■■□ 3.47
NDEL1-209ENST00000580738 OSCARQ8IYS5 282 aa36.72■■■■□ 3.47
NDEL1-209ENST00000580738 URB2Q14146 1524 aaKnown RBP36.62■■■■□ 3.45
NDEL1-209ENST00000580738 RSF1Q96T23 1441 aaPredicted RBP36.61■■■■□ 3.45
NDEL1-209ENST00000580738 TOP2AP11388 1531 aaKnown RBP36.53■■■■□ 3.44
NDEL1-209ENST00000580738 ZNF608Q9ULD9 1512 aaPredicted RBP36.28■■■■□ 3.4
NDEL1-209ENST00000580738 RIMBP3CA6NJZ7 1639 aa36.24■■■■□ 3.39
NDEL1-209ENST00000580738 RIMBP3BA6NNM3 1639 aa36.24■■■■□ 3.39
NDEL1-209ENST00000580738 RIMBP3Q9UFD9 1639 aa36.24■■■■□ 3.39
NDEL1-209ENST00000580738 IFT140Q96RY7 1462 aa36.21■■■■□ 3.39
NDEL1-209ENST00000580738 PRDM2Q13029 1718 aa36.19■■■■□ 3.38
NDEL1-209ENST00000580738 CCDC88BA6NC98 1476 aa36.18■■■■□ 3.38
NDEL1-209ENST00000580738 TOPBP1Q92547 1522 aa36.11■■■■□ 3.37
NDEL1-209ENST00000580738 ARHGEF11O15085 1522 aa36.1■■■■□ 3.37
NDEL1-209ENST00000580738 EIF4G3O43432 1585 aaKnown RBP35.97■■■■□ 3.35
NDEL1-209ENST00000580738 CYB5RLQ6IPT4 315 aa35.94■■■■□ 3.34
NDEL1-209ENST00000580738 ABCC8Q09428 1581 aa35.93■■■■□ 3.34
NDEL1-209ENST00000580738 DNMBPQ6XZF7 1577 aa35.89■■■■□ 3.34
NDEL1-209ENST00000580738 AQRO60306 1485 aaKnown RBP eCLIP35.89■■■■□ 3.346e-9■■■■□ 20
NDEL1-209ENST00000580738 TARBP1Q13395 1621 aaKnown RBP35.81■■■■□ 3.32
NDEL1-209ENST00000580738 FBLN2P98095 1184 aa35.78■■■■□ 3.32
NDEL1-209ENST00000580738 CHD1O14646 1710 aa35.77■■■■□ 3.32
NDEL1-209ENST00000580738 ARAP1Q96P48 1450 aa35.73■■■■□ 3.31
NDEL1-209ENST00000580738 POLA1P09884 1462 aaPredicted RBP35.72■■■■□ 3.31
NDEL1-209ENST00000580738 TRHP20396 242 aaPredicted RBP35.69■■■■□ 3.3
NDEL1-209ENST00000580738 RAD54L2Q9Y4B4 1467 aa35.64■■■■□ 3.3
NDEL1-209ENST00000580738 TDRD9Q8NDG6 1382 aaKnown RBP35.61■■■■□ 3.29
NDEL1-209ENST00000580738 SOGA1O94964 1423 aa35.56■■■■□ 3.28
NDEL1-209ENST00000580738 SNAPC4Q5SXM2 1469 aa35.46■■■■□ 3.27
NDEL1-209ENST00000580738 FGD5Q6ZNL6 1462 aa35.41■■■■□ 3.26
NDEL1-209ENST00000580738 CHMP7Q8WUX9 453 aaPredicted RBP35.4■■■■□ 3.26
NDEL1-209ENST00000580738 CLASP1Q7Z460 1538 aa35.39■■■■□ 3.26
NDEL1-209ENST00000580738 WDR97A6NE52 1622 aa35.31■■■■□ 3.24
NDEL1-209ENST00000580738 CUX1P39880 1505 aa35.31■■■■□ 3.24
NDEL1-209ENST00000580738 MAGI1Q96QZ7 1491 aaPredicted RBP35.3■■■■□ 3.24
NDEL1-209ENST00000580738 SYNJ1O43426 1573 aa35.29■■■■□ 3.24
NDEL1-209ENST00000580738 GRIN2BQ13224 1484 aa35.28■■■■□ 3.24
NDEL1-209ENST00000580738 SYNJ2O15056 1496 aa35.22■■■■□ 3.23
NDEL1-209ENST00000580738 GAPVD1Q14C86 1478 aa35.09■■■■□ 3.21
NDEL1-209ENST00000580738 PBRM1Q86U86 1689 aa35.03■■■■□ 3.2
NDEL1-209ENST00000580738 AEBP2Q6ZN18 517 aaPredicted RBP35■■■■□ 3.19
NDEL1-209ENST00000580738 ABCA10Q8WWZ4 1543 aa34.96■■■■□ 3.19
NDEL1-209ENST00000580738 ABCA5Q8WWZ7 1642 aa34.93■■■■□ 3.18
NDEL1-209ENST00000580738 ERCC6L2Q5T890 1561 aa34.87■■■■□ 3.17
NDEL1-209ENST00000580738 GRIN2AQ12879 1464 aa34.83■■■■□ 3.17
NDEL1-209ENST00000580738 WRNQ14191 1432 aaPredicted RBP eCLIP34.74■■■■□ 3.15
NDEL1-209ENST00000580738 NUP160Q12769 1436 aa34.73■■■■□ 3.15
NDEL1-209ENST00000580738 CEP170Q5SW79 1584 aa34.73■■■■□ 3.15
NDEL1-209ENST00000580738 ADAMTS12P58397 1594 aa34.7■■■■□ 3.15
NDEL1-209ENST00000580738 SUPT5HO00267 1087 aaKnown RBP34.67■■■■□ 3.14
NDEL1-209ENST00000580738 FHAD1B1AJZ9 1412 aa34.63■■■■□ 3.13
NDEL1-209ENST00000580738 SHROOM2Q13796 1616 aa34.59■■■■□ 3.13
NDEL1-209ENST00000580738 TOP2BQ02880 1626 aa34.55■■■■□ 3.12
NDEL1-209ENST00000580738 BIVM-ERCC5R4GMW8 1640 aa34.53■■■■□ 3.12
NDEL1-209ENST00000580738 ERICH3Q5RHP9 1530 aa34.49■■■■□ 3.11
NDEL1-209ENST00000580738 PRG4Q92954 1404 aaPredicted RBP34.47■■■■□ 3.11
NDEL1-209ENST00000580738 JPH4Q96JJ6 628 aa34.43■■■■□ 3.1
NDEL1-209ENST00000580738 KIF13AQ9H1H9 1805 aa34.4■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms