RNA–Protein interactions for RNA: ENST00000580338.5

STRADA-216, Transcript of STE20-related kinase adaptor alpha, humanhuman

TSL 4

Gene STRADA, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADA-216ENST00000580338 NISCHQ9Y2I1 1504 aa35.04■■■■□ 3.2
STRADA-216ENST00000580338 CCDC180Q9P1Z9 1646 aa31.36■■■□□ 2.61
STRADA-216ENST00000580338 ABCC9O60706 1549 aa31.24■■■□□ 2.59
STRADA-216ENST00000580338 RB1CC1Q8TDY2 1594 aa29.84■■■□□ 2.37
STRADA-216ENST00000580338 NACADO15069 1562 aa29.67■■■□□ 2.34
STRADA-216ENST00000580338 DCAF8L2P0C7V8 631 aa29.62■■■□□ 2.33
STRADA-216ENST00000580338 MYO15BQ96JP2 1530 aa29.32■■■□□ 2.28
STRADA-216ENST00000580338 PABPN1Q86U42 306 aaKnown RBP eCLIP29.14■■■□□ 2.26
STRADA-216ENST00000580338 DNAJC5BQ9UF47 199 aa29.14■■■□□ 2.26
STRADA-216ENST00000580338 ZCCHC6Q5VYS8 1495 aaKnown RBP29.05■■■□□ 2.24
STRADA-216ENST00000580338 UNC13AQ9UPW8 1703 aa29.01■■■□□ 2.23
STRADA-216ENST00000580338 DCAF1Q9Y4B6 1507 aa28.98■■■□□ 2.23
STRADA-216ENST00000580338 BICRAQ9NZM4 1560 aa28.86■■■□□ 2.21
STRADA-216ENST00000580338 SHROOM4Q9ULL8 1493 aa28.63■■■□□ 2.17
STRADA-216ENST00000580338 SCRIBQ14160 1630 aa28.58■■■□□ 2.17
STRADA-216ENST00000580338 CC2D2AQ9P2K1 1620 aa28.21■■■□□ 2.11
STRADA-216ENST00000580338 EIF4G1Q04637 1599 aaKnown RBP28.2■■■□□ 2.11
STRADA-216ENST00000580338 CECR2Q9BXF3 1484 aa28.16■■■□□ 2.1
STRADA-216ENST00000580338 NCAPD3P42695 1498 aa27.39■■□□□ 1.98
STRADA-216ENST00000580338 ATAD2BQ9ULI0 1458 aa27.31■■□□□ 1.96
STRADA-216ENST00000580338 SMARCA4P51532 1647 aa27.28■■□□□ 1.96
STRADA-216ENST00000580338 SMARCA2P51531 1590 aa27.27■■□□□ 1.96
STRADA-216ENST00000580338 BAZ1AQ9NRL2 1556 aaPredicted RBP27.22■■□□□ 1.95
STRADA-216ENST00000580338 HMGXB3Q12766 1538 aa27.18■■□□□ 1.94
STRADA-216ENST00000580338 BAZ1BQ9UIG0 1483 aaKnown RBP27.08■■□□□ 1.93
STRADA-216ENST00000580338 ERCC6Q03468 1493 aa27.04■■□□□ 1.92
STRADA-216ENST00000580338 PEG3Q9GZU2 1588 aa27.02■■□□□ 1.92
STRADA-216ENST00000580338 MROH2BQ7Z745 1585 aa26.97■■□□□ 1.91
STRADA-216ENST00000580338 CUX2O14529 1486 aa26.93■■□□□ 1.9
STRADA-216ENST00000580338 NESP48681 1621 aa26.84■■□□□ 1.89
STRADA-216ENST00000580338 DNAJC5Q9H3Z4 198 aa26.75■■□□□ 1.87
STRADA-216ENST00000580338 LAMC3Q9Y6N6 1575 aa26.75■■□□□ 1.87
STRADA-216ENST00000580338 PDS5BQ9NTI5 1447 aa26.65■■□□□ 1.86
STRADA-216ENST00000580338 WIZO95785 1651 aa26.63■■□□□ 1.85
STRADA-216ENST00000580338 CADPSQ9ULU8 1353 aa26.58■■□□□ 1.85
STRADA-216ENST00000580338 THOC2Q8NI27 1593 aaKnown RBP26.53■■□□□ 1.84
STRADA-216ENST00000580338 RSF1Q96T23 1441 aaPredicted RBP26.5■■□□□ 1.83
STRADA-216ENST00000580338 KIF21AQ7Z4S6 1674 aa26.47■■□□□ 1.83
STRADA-216ENST00000580338 TOP2AP11388 1531 aaKnown RBP26.35■■□□□ 1.81
STRADA-216ENST00000580338 MRC2Q9UBG0 1479 aa26.35■■□□□ 1.81
STRADA-216ENST00000580338 CFTRP13569 1480 aa26.29■■□□□ 1.8
STRADA-216ENST00000580338 CEP164Q9UPV0 1460 aa26.29■■□□□ 1.8
STRADA-216ENST00000580338 FANCD2Q9BXW9 1451 aa26.26■■□□□ 1.79
STRADA-216ENST00000580338 WDR62O43379 1518 aa26.25■■□□□ 1.79
STRADA-216ENST00000580338 CCDC88BA6NC98 1476 aa26.05■■□□□ 1.76
STRADA-216ENST00000580338 URB2Q14146 1524 aaKnown RBP25.98■■□□□ 1.75
STRADA-216ENST00000580338 PRDM2Q13029 1718 aa25.95■■□□□ 1.74
STRADA-216ENST00000580338 ABCC8Q09428 1581 aa25.8■■□□□ 1.72
STRADA-216ENST00000580338 OSCARQ8IYS5 282 aa25.78■■□□□ 1.72
STRADA-216ENST00000580338 IFT140Q96RY7 1462 aa25.77■■□□□ 1.72
STRADA-216ENST00000580338 TOPBP1Q92547 1522 aa25.75■■□□□ 1.71
STRADA-216ENST00000580338 DNMBPQ6XZF7 1577 aa25.68■■□□□ 1.7
STRADA-216ENST00000580338 TRIM41Q8WV44 630 aa25.65■■□□□ 1.7
STRADA-216ENST00000580338 ZNF608Q9ULD9 1512 aaPredicted RBP25.64■■□□□ 1.7
STRADA-216ENST00000580338 EIF4G3O43432 1585 aaKnown RBP25.5■■□□□ 1.67
STRADA-216ENST00000580338 POLA1P09884 1462 aaPredicted RBP25.5■■□□□ 1.67
STRADA-216ENST00000580338 SUPT5HO00267 1087 aaKnown RBP25.49■■□□□ 1.67
STRADA-216ENST00000580338 TARBP1Q13395 1621 aaKnown RBP25.47■■□□□ 1.67
STRADA-216ENST00000580338 AQRO60306 1485 aaKnown RBP eCLIP25.46■■□□□ 1.67
STRADA-216ENST00000580338 SOGA1O94964 1423 aa25.44■■□□□ 1.66
STRADA-216ENST00000580338 RAD54L2Q9Y4B4 1467 aa25.39■■□□□ 1.65
STRADA-216ENST00000580338 FGD5Q6ZNL6 1462 aa25.36■■□□□ 1.65
STRADA-216ENST00000580338 FBLN2P98095 1184 aa25.35■■□□□ 1.65
STRADA-216ENST00000580338 TDRD9Q8NDG6 1382 aaKnown RBP25.34■■□□□ 1.65
STRADA-216ENST00000580338 CUX1P39880 1505 aa25.33■■□□□ 1.65
STRADA-216ENST00000580338 WDR97A6NE52 1622 aa25.3■■□□□ 1.64
STRADA-216ENST00000580338 RIMBP3CA6NJZ7 1639 aa25.29■■□□□ 1.64
STRADA-216ENST00000580338 RIMBP3BA6NNM3 1639 aa25.29■■□□□ 1.64
STRADA-216ENST00000580338 RIMBP3Q9UFD9 1639 aa25.29■■□□□ 1.64
STRADA-216ENST00000580338 ARHGEF11O15085 1522 aa25.26■■□□□ 1.63
STRADA-216ENST00000580338 CHD1O14646 1710 aa25.25■■□□□ 1.63
STRADA-216ENST00000580338 SNAPC4Q5SXM2 1469 aa25.21■■□□□ 1.63
STRADA-216ENST00000580338 CHMP7Q8WUX9 453 aaPredicted RBP25.2■■□□□ 1.62
STRADA-216ENST00000580338 GRIN2BQ13224 1484 aa25.2■■□□□ 1.62
STRADA-216ENST00000580338 MAGI1Q96QZ7 1491 aaPredicted RBP25.19■■□□□ 1.62
STRADA-216ENST00000580338 CYB5RLQ6IPT4 315 aa25.14■■□□□ 1.62
STRADA-216ENST00000580338 GAPVD1Q14C86 1478 aa25.12■■□□□ 1.61
STRADA-216ENST00000580338 ABCA10Q8WWZ4 1543 aa25.11■■□□□ 1.61
STRADA-216ENST00000580338 SYNJ2O15056 1496 aa25.09■■□□□ 1.61
STRADA-216ENST00000580338 WRNQ14191 1432 aaPredicted RBP eCLIP25.08■■□□□ 1.61
STRADA-216ENST00000580338 SYNJ1O43426 1573 aa25.07■■□□□ 1.6
STRADA-216ENST00000580338 PBRM1Q86U86 1689 aa25.01■■□□□ 1.59
STRADA-216ENST00000580338 ARAP1Q96P48 1450 aa25.01■■□□□ 1.59
STRADA-216ENST00000580338 CLASP1Q7Z460 1538 aa25■■□□□ 1.59
STRADA-216ENST00000580338 ABCA5Q8WWZ7 1642 aa25■■□□□ 1.59
STRADA-216ENST00000580338 TOP2BQ02880 1626 aa24.98■■□□□ 1.59
STRADA-216ENST00000580338 BIVM-ERCC5R4GMW8 1640 aa24.96■■□□□ 1.59
STRADA-216ENST00000580338 TRHP20396 242 aaPredicted RBP24.85■■□□□ 1.57
STRADA-216ENST00000580338 GRIN2AQ12879 1464 aa24.84■■□□□ 1.57
STRADA-216ENST00000580338 FHAD1B1AJZ9 1412 aa24.83■■□□□ 1.57
STRADA-216ENST00000580338 ADAMTS12P58397 1594 aa24.81■■□□□ 1.56
STRADA-216ENST00000580338 ERICH3Q5RHP9 1530 aa24.8■■□□□ 1.56
STRADA-216ENST00000580338 NUP160Q12769 1436 aa24.76■■□□□ 1.55
STRADA-216ENST00000580338 CEP170Q5SW79 1584 aa24.69■■□□□ 1.54
STRADA-216ENST00000580338 KIF27Q86VH2 1401 aa24.59■■□□□ 1.53
STRADA-216ENST00000580338 ERCC6L2Q5T890 1561 aa24.58■■□□□ 1.52
STRADA-216ENST00000580338 SHROOM2Q13796 1616 aa24.57■■□□□ 1.52
STRADA-216ENST00000580338 JPH4Q96JJ6 628 aa24.57■■□□□ 1.52
STRADA-216ENST00000580338 PRG4Q92954 1404 aaPredicted RBP24.52■■□□□ 1.52
STRADA-216ENST00000580338 IGF1RP08069 1367 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms