RNA–Protein interactions for RNA: ENST00000580316.5

EPB41L3-219, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

TSL 5

Gene EPB41L3, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-219ENST00000580316 NISCHQ9Y2I1 1504 aa28.89■■■□□ 2.22
EPB41L3-219ENST00000580316 CCDC180Q9P1Z9 1646 aa25.67■■□□□ 1.7
EPB41L3-219ENST00000580316 ABCC9O60706 1549 aa25.13■■□□□ 1.61
EPB41L3-219ENST00000580316 NACADO15069 1562 aa24.2■■□□□ 1.46
EPB41L3-219ENST00000580316 RB1CC1Q8TDY2 1594 aa24.2■■□□□ 1.46
EPB41L3-219ENST00000580316 MYO15BQ96JP2 1530 aa24.11■■□□□ 1.45
EPB41L3-219ENST00000580316 DCAF8L2P0C7V8 631 aa24.07■■□□□ 1.44
EPB41L3-219ENST00000580316 ZCCHC6Q5VYS8 1495 aaKnown RBP24.04■■□□□ 1.44
EPB41L3-219ENST00000580316 DCAF1Q9Y4B6 1507 aa23.96■■□□□ 1.43
EPB41L3-219ENST00000580316 UNC13AQ9UPW8 1703 aa23.58■■□□□ 1.37
EPB41L3-219ENST00000580316 PABPN1Q86U42 306 aaKnown RBP eCLIP23.5■■□□□ 1.35
EPB41L3-219ENST00000580316 BICRAQ9NZM4 1560 aa23.49■■□□□ 1.35
EPB41L3-219ENST00000580316 SCRIBQ14160 1630 aa23.33■■□□□ 1.32
EPB41L3-219ENST00000580316 SHROOM4Q9ULL8 1493 aa23.3■■□□□ 1.32
EPB41L3-219ENST00000580316 DNAJC5BQ9UF47 199 aa23.22■■□□□ 1.31
EPB41L3-219ENST00000580316 EIF4G1Q04637 1599 aaKnown RBP22.84■■□□□ 1.25
EPB41L3-219ENST00000580316 CC2D2AQ9P2K1 1620 aa22.75■■□□□ 1.23
EPB41L3-219ENST00000580316 CECR2Q9BXF3 1484 aa22.62■■□□□ 1.21
EPB41L3-219ENST00000580316 SMARCA4P51532 1647 aa22.39■■□□□ 1.17
EPB41L3-219ENST00000580316 BAZ1AQ9NRL2 1556 aaPredicted RBP22.38■■□□□ 1.17
EPB41L3-219ENST00000580316 NCAPD3P42695 1498 aa22.37■■□□□ 1.17
EPB41L3-219ENST00000580316 ATAD2BQ9ULI0 1458 aa22.33■■□□□ 1.16
EPB41L3-219ENST00000580316 SMARCA2P51531 1590 aa22.28■■□□□ 1.16
EPB41L3-219ENST00000580316 MROH2BQ7Z745 1585 aa22.24■■□□□ 1.15
EPB41L3-219ENST00000580316 PEG3Q9GZU2 1588 aa22.24■■□□□ 1.15
EPB41L3-219ENST00000580316 HMGXB3Q12766 1538 aa22.2■■□□□ 1.14
EPB41L3-219ENST00000580316 BAZ1BQ9UIG0 1483 aaKnown RBP22.09■■□□□ 1.13
EPB41L3-219ENST00000580316 RSF1Q96T23 1441 aaPredicted RBP22■■□□□ 1.11
EPB41L3-219ENST00000580316 WIZO95785 1651 aa21.95■■□□□ 1.1
EPB41L3-219ENST00000580316 TOP2AP11388 1531 aaKnown RBP21.75■■□□□ 1.07
EPB41L3-219ENST00000580316 NESP48681 1621 aa21.74■■□□□ 1.07
EPB41L3-219ENST00000580316 LAMC3Q9Y6N6 1575 aa21.73■■□□□ 1.07
EPB41L3-219ENST00000580316 CADPSQ9ULU8 1353 aa21.69■■□□□ 1.06
EPB41L3-219ENST00000580316 ERCC6Q03468 1493 aa21.64■■□□□ 1.06
EPB41L3-219ENST00000580316 PDS5BQ9NTI5 1447 aa21.6■■□□□ 1.05
EPB41L3-219ENST00000580316 CFTRP13569 1480 aa21.55■■□□□ 1.04
EPB41L3-219ENST00000580316 CCDC88BA6NC98 1476 aa21.52■■□□□ 1.04
EPB41L3-219ENST00000580316 CUX2O14529 1486 aa21.52■■□□□ 1.04
EPB41L3-219ENST00000580316 KIF21AQ7Z4S6 1674 aa21.44■■□□□ 1.02
EPB41L3-219ENST00000580316 THOC2Q8NI27 1593 aaKnown RBP21.42■■□□□ 1.02
EPB41L3-219ENST00000580316 FANCD2Q9BXW9 1451 aa21.39■■□□□ 1.01
EPB41L3-219ENST00000580316 CEP164Q9UPV0 1460 aa21.35■■□□□ 1.01
EPB41L3-219ENST00000580316 MRC2Q9UBG0 1479 aa21.34■■□□□ 1.01
EPB41L3-219ENST00000580316 SUPT5HO00267 1087 aaKnown RBP21.31■■□□□ 1
EPB41L3-219ENST00000580316 WDR62O43379 1518 aa21.29■■□□□ 1
EPB41L3-219ENST00000580316 PRDM2Q13029 1718 aa21.26■□□□□ 0.99
EPB41L3-219ENST00000580316 URB2Q14146 1524 aaKnown RBP21.18■□□□□ 0.98
EPB41L3-219ENST00000580316 ABCC8Q09428 1581 aa21.1■□□□□ 0.97
EPB41L3-219ENST00000580316 TOPBP1Q92547 1522 aa21.04■□□□□ 0.96
EPB41L3-219ENST00000580316 DNMBPQ6XZF7 1577 aa21■□□□□ 0.95
EPB41L3-219ENST00000580316 DNAJC5Q9H3Z4 198 aa20.99■□□□□ 0.95
EPB41L3-219ENST00000580316 IFT140Q96RY7 1462 aa20.94■□□□□ 0.94
EPB41L3-219ENST00000580316 POLA1P09884 1462 aaPredicted RBP20.86■□□□□ 0.93
EPB41L3-219ENST00000580316 CUX1P39880 1505 aa20.85■□□□□ 0.93
EPB41L3-219ENST00000580316 TARBP1Q13395 1621 aaKnown RBP20.82■□□□□ 0.92
EPB41L3-219ENST00000580316 ZNF608Q9ULD9 1512 aaPredicted RBP20.82■□□□□ 0.92
EPB41L3-219ENST00000580316 SOGA1O94964 1423 aa20.8■□□□□ 0.92
EPB41L3-219ENST00000580316 FGD5Q6ZNL6 1462 aa20.78■□□□□ 0.92
EPB41L3-219ENST00000580316 RAD54L2Q9Y4B4 1467 aa20.75■□□□□ 0.91
EPB41L3-219ENST00000580316 AQRO60306 1485 aaKnown RBP eCLIP20.71■□□□□ 0.91
EPB41L3-219ENST00000580316 WRNQ14191 1432 aaPredicted RBP eCLIP20.7■□□□□ 0.9
EPB41L3-219ENST00000580316 EIF4G3O43432 1585 aaKnown RBP20.69■□□□□ 0.9
EPB41L3-219ENST00000580316 WDR97A6NE52 1622 aa20.68■□□□□ 0.9
EPB41L3-219ENST00000580316 TOP2BQ02880 1626 aa20.67■□□□□ 0.9
EPB41L3-219ENST00000580316 OSCARQ8IYS5 282 aa20.66■□□□□ 0.9
EPB41L3-219ENST00000580316 TDRD9Q8NDG6 1382 aaKnown RBP20.66■□□□□ 0.9
EPB41L3-219ENST00000580316 BIVM-ERCC5R4GMW8 1640 aa20.65■□□□□ 0.9
EPB41L3-219ENST00000580316 ABCA10Q8WWZ4 1543 aa20.63■□□□□ 0.89
EPB41L3-219ENST00000580316 SYNJ1O43426 1573 aa20.62■□□□□ 0.89
EPB41L3-219ENST00000580316 GRIN2BQ13224 1484 aa20.56■□□□□ 0.88
EPB41L3-219ENST00000580316 GAPVD1Q14C86 1478 aa20.54■□□□□ 0.88
EPB41L3-219ENST00000580316 MAGI1Q96QZ7 1491 aaPredicted RBP20.51■□□□□ 0.87
EPB41L3-219ENST00000580316 ABCA5Q8WWZ7 1642 aa20.5■□□□□ 0.87
EPB41L3-219ENST00000580316 SNAPC4Q5SXM2 1469 aa20.48■□□□□ 0.87
EPB41L3-219ENST00000580316 SYNJ2O15056 1496 aa20.43■□□□□ 0.86
EPB41L3-219ENST00000580316 FBLN2P98095 1184 aa20.42■□□□□ 0.86
EPB41L3-219ENST00000580316 CHMP7Q8WUX9 453 aaPredicted RBP20.42■□□□□ 0.86
EPB41L3-219ENST00000580316 CHD1O14646 1710 aa20.41■□□□□ 0.86
EPB41L3-219ENST00000580316 PBRM1Q86U86 1689 aa20.41■□□□□ 0.86
EPB41L3-219ENST00000580316 ERICH3Q5RHP9 1530 aa20.37■□□□□ 0.85
EPB41L3-219ENST00000580316 FHAD1B1AJZ9 1412 aa20.32■□□□□ 0.84
EPB41L3-219ENST00000580316 KIF27Q86VH2 1401 aa20.29■□□□□ 0.84
EPB41L3-219ENST00000580316 ADAMTS12P58397 1594 aa20.29■□□□□ 0.84
EPB41L3-219ENST00000580316 CLASP1Q7Z460 1538 aa20.28■□□□□ 0.84
EPB41L3-219ENST00000580316 IGF1RP08069 1367 aa20.28■□□□□ 0.84
EPB41L3-219ENST00000580316 GRIN2AQ12879 1464 aa20.27■□□□□ 0.84
EPB41L3-219ENST00000580316 ARHGEF11O15085 1522 aa20.25■□□□□ 0.83
EPB41L3-219ENST00000580316 RIMBP3CA6NJZ7 1639 aa20.24■□□□□ 0.83
EPB41L3-219ENST00000580316 RIMBP3BA6NNM3 1639 aa20.24■□□□□ 0.83
EPB41L3-219ENST00000580316 RIMBP3Q9UFD9 1639 aa20.24■□□□□ 0.83
EPB41L3-219ENST00000580316 NUP160Q12769 1436 aa20.22■□□□□ 0.83
EPB41L3-219ENST00000580316 TRIM41Q8WV44 630 aa20.18■□□□□ 0.82
EPB41L3-219ENST00000580316 CEP170Q5SW79 1584 aa20.14■□□□□ 0.81
EPB41L3-219ENST00000580316 CUL7Q14999 1698 aa20.13■□□□□ 0.81
EPB41L3-219ENST00000580316 CARMIL1Q5VZK9 1371 aa20.11■□□□□ 0.81
EPB41L3-219ENST00000580316 CYB5RLQ6IPT4 315 aa20.09■□□□□ 0.81
EPB41L3-219ENST00000580316 ARAP1Q96P48 1450 aa20.08■□□□□ 0.81
EPB41L3-219ENST00000580316 RUSC2Q8N2Y8 1516 aa20.07■□□□□ 0.8
EPB41L3-219ENST00000580316 SHROOM2Q13796 1616 aa20.05■□□□□ 0.8
EPB41L3-219ENST00000580316 JPH4Q96JJ6 628 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms