RNA–Protein interactions for RNA: ENST00000580288.2

STRADA-215, Transcript of STE20-related kinase adaptor alpha, humanhuman

TSL 5

Gene STRADA, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADA-215ENST00000580288 NISCHQ9Y2I1 1504 aa37.97■■■■□ 3.67
STRADA-215ENST00000580288 CCDC180Q9P1Z9 1646 aa34.1■■■■□ 3.05
STRADA-215ENST00000580288 ABCC9O60706 1549 aa33.88■■■■□ 3.01
STRADA-215ENST00000580288 RB1CC1Q8TDY2 1594 aa32.36■■■□□ 2.77
STRADA-215ENST00000580288 NACADO15069 1562 aa32.16■■■□□ 2.74
STRADA-215ENST00000580288 DCAF8L2P0C7V8 631 aa31.86■■■□□ 2.69
STRADA-215ENST00000580288 MYO15BQ96JP2 1530 aa31.78■■■□□ 2.68
STRADA-215ENST00000580288 UNC13AQ9UPW8 1703 aa31.61■■■□□ 2.65
STRADA-215ENST00000580288 DNAJC5BQ9UF47 199 aa31.57■■■□□ 2.64
STRADA-215ENST00000580288 ZCCHC6Q5VYS8 1495 aaKnown RBP31.52■■■□□ 2.64
STRADA-215ENST00000580288 PABPN1Q86U42 306 aaKnown RBP eCLIP31.49■■■□□ 2.63
STRADA-215ENST00000580288 DCAF1Q9Y4B6 1507 aa31.41■■■□□ 2.62
STRADA-215ENST00000580288 BICRAQ9NZM4 1560 aa31.39■■■□□ 2.61
STRADA-215ENST00000580288 SHROOM4Q9ULL8 1493 aa31.06■■■□□ 2.56
STRADA-215ENST00000580288 SCRIBQ14160 1630 aa31.02■■■□□ 2.56
STRADA-215ENST00000580288 CC2D2AQ9P2K1 1620 aa30.64■■■□□ 2.5
STRADA-215ENST00000580288 EIF4G1Q04637 1599 aaKnown RBP30.62■■■□□ 2.49
STRADA-215ENST00000580288 CECR2Q9BXF3 1484 aa30.52■■■□□ 2.48
STRADA-215ENST00000580288 NCAPD3P42695 1498 aa29.66■■■□□ 2.34
STRADA-215ENST00000580288 SMARCA4P51532 1647 aa29.62■■■□□ 2.33
STRADA-215ENST00000580288 ATAD2BQ9ULI0 1458 aa29.58■■■□□ 2.33
STRADA-215ENST00000580288 SMARCA2P51531 1590 aa29.56■■■□□ 2.32
STRADA-215ENST00000580288 HMGXB3Q12766 1538 aa29.51■■■□□ 2.32
STRADA-215ENST00000580288 BAZ1AQ9NRL2 1556 aaPredicted RBP29.5■■■□□ 2.31
STRADA-215ENST00000580288 PEG3Q9GZU2 1588 aa29.35■■■□□ 2.29
STRADA-215ENST00000580288 BAZ1BQ9UIG0 1483 aaKnown RBP29.33■■■□□ 2.29
STRADA-215ENST00000580288 ERCC6Q03468 1493 aa29.28■■■□□ 2.28
STRADA-215ENST00000580288 MROH2BQ7Z745 1585 aa29.24■■■□□ 2.27
STRADA-215ENST00000580288 CUX2O14529 1486 aa29.21■■■□□ 2.27
STRADA-215ENST00000580288 NESP48681 1621 aa29.12■■■□□ 2.25
STRADA-215ENST00000580288 LAMC3Q9Y6N6 1575 aa29.01■■■□□ 2.24
STRADA-215ENST00000580288 DNAJC5Q9H3Z4 198 aa28.94■■■□□ 2.22
STRADA-215ENST00000580288 WIZO95785 1651 aa28.89■■■□□ 2.22
STRADA-215ENST00000580288 THOC2Q8NI27 1593 aaKnown RBP28.88■■■□□ 2.21
STRADA-215ENST00000580288 KIF21AQ7Z4S6 1674 aa28.81■■■□□ 2.2
STRADA-215ENST00000580288 PDS5BQ9NTI5 1447 aa28.81■■■□□ 2.2
STRADA-215ENST00000580288 CADPSQ9ULU8 1353 aa28.75■■■□□ 2.19
STRADA-215ENST00000580288 RSF1Q96T23 1441 aaPredicted RBP28.67■■■□□ 2.18
STRADA-215ENST00000580288 TOP2AP11388 1531 aaKnown RBP28.59■■■□□ 2.17
STRADA-215ENST00000580288 MRC2Q9UBG0 1479 aa28.58■■■□□ 2.17
STRADA-215ENST00000580288 WDR62O43379 1518 aa28.52■■■□□ 2.16
STRADA-215ENST00000580288 CEP164Q9UPV0 1460 aa28.49■■■□□ 2.15
STRADA-215ENST00000580288 CFTRP13569 1480 aa28.46■■■□□ 2.15
STRADA-215ENST00000580288 FANCD2Q9BXW9 1451 aa28.44■■■□□ 2.14
STRADA-215ENST00000580288 PRDM2Q13029 1718 aa28.26■■■□□ 2.12
STRADA-215ENST00000580288 CCDC88BA6NC98 1476 aa28.2■■■□□ 2.1
STRADA-215ENST00000580288 URB2Q14146 1524 aaKnown RBP28.19■■■□□ 2.1
STRADA-215ENST00000580288 TOPBP1Q92547 1522 aa27.92■■■□□ 2.06
STRADA-215ENST00000580288 IFT140Q96RY7 1462 aa27.9■■■□□ 2.06
STRADA-215ENST00000580288 ABCC8Q09428 1581 aa27.89■■■□□ 2.05
STRADA-215ENST00000580288 DNMBPQ6XZF7 1577 aa27.86■■■□□ 2.05
STRADA-215ENST00000580288 ZNF608Q9ULD9 1512 aaPredicted RBP27.81■■■□□ 2.04
STRADA-215ENST00000580288 OSCARQ8IYS5 282 aa27.79■■■□□ 2.04
STRADA-215ENST00000580288 EIF4G3O43432 1585 aaKnown RBP27.73■■■□□ 2.03
STRADA-215ENST00000580288 TRIM41Q8WV44 630 aa27.72■■■□□ 2.03
STRADA-215ENST00000580288 TARBP1Q13395 1621 aaKnown RBP27.67■■■□□ 2.02
STRADA-215ENST00000580288 POLA1P09884 1462 aaPredicted RBP27.64■■■□□ 2.02
STRADA-215ENST00000580288 AQRO60306 1485 aaKnown RBP eCLIP27.55■■■□□ 2
STRADA-215ENST00000580288 RAD54L2Q9Y4B4 1467 aa27.5■■□□□ 1.99
STRADA-215ENST00000580288 RIMBP3CA6NJZ7 1639 aa27.49■■□□□ 1.99
STRADA-215ENST00000580288 RIMBP3BA6NNM3 1639 aa27.49■■□□□ 1.99
STRADA-215ENST00000580288 RIMBP3Q9UFD9 1639 aa27.49■■□□□ 1.99
STRADA-215ENST00000580288 CHD1O14646 1710 aa27.49■■□□□ 1.99
STRADA-215ENST00000580288 FGD5Q6ZNL6 1462 aa27.49■■□□□ 1.99
STRADA-215ENST00000580288 SOGA1O94964 1423 aa27.49■■□□□ 1.99
STRADA-215ENST00000580288 CUX1P39880 1505 aa27.48■■□□□ 1.99
STRADA-215ENST00000580288 WDR97A6NE52 1622 aa27.47■■□□□ 1.99
STRADA-215ENST00000580288 ARHGEF11O15085 1522 aa27.42■■□□□ 1.98
STRADA-215ENST00000580288 SUPT5HO00267 1087 aaKnown RBP27.41■■□□□ 1.98
STRADA-215ENST00000580288 TDRD9Q8NDG6 1382 aaKnown RBP27.39■■□□□ 1.98
STRADA-215ENST00000580288 SNAPC4Q5SXM2 1469 aa27.33■■□□□ 1.97
STRADA-215ENST00000580288 FBLN2P98095 1184 aa27.31■■□□□ 1.96
STRADA-215ENST00000580288 MAGI1Q96QZ7 1491 aaPredicted RBP27.28■■□□□ 1.96
STRADA-215ENST00000580288 GRIN2BQ13224 1484 aa27.27■■□□□ 1.96
STRADA-215ENST00000580288 PBRM1Q86U86 1689 aa27.21■■□□□ 1.95
STRADA-215ENST00000580288 ABCA10Q8WWZ4 1543 aa27.19■■□□□ 1.94
STRADA-215ENST00000580288 GAPVD1Q14C86 1478 aa27.19■■□□□ 1.94
STRADA-215ENST00000580288 SYNJ1O43426 1573 aa27.18■■□□□ 1.94
STRADA-215ENST00000580288 CLASP1Q7Z460 1538 aa27.18■■□□□ 1.94
STRADA-215ENST00000580288 SYNJ2O15056 1496 aa27.18■■□□□ 1.94
STRADA-215ENST00000580288 ABCA5Q8WWZ7 1642 aa27.17■■□□□ 1.94
STRADA-215ENST00000580288 ARAP1Q96P48 1450 aa27.16■■□□□ 1.94
STRADA-215ENST00000580288 CHMP7Q8WUX9 453 aaPredicted RBP27.15■■□□□ 1.94
STRADA-215ENST00000580288 CYB5RLQ6IPT4 315 aa27.12■■□□□ 1.93
STRADA-215ENST00000580288 BIVM-ERCC5R4GMW8 1640 aa27.11■■□□□ 1.93
STRADA-215ENST00000580288 TOP2BQ02880 1626 aa27.09■■□□□ 1.93
STRADA-215ENST00000580288 WRNQ14191 1432 aaPredicted RBP eCLIP27.09■■□□□ 1.93
STRADA-215ENST00000580288 ADAMTS12P58397 1594 aa26.97■■□□□ 1.91
STRADA-215ENST00000580288 GRIN2AQ12879 1464 aa26.93■■□□□ 1.9
STRADA-215ENST00000580288 ERICH3Q5RHP9 1530 aa26.87■■□□□ 1.89
STRADA-215ENST00000580288 FHAD1B1AJZ9 1412 aa26.85■■□□□ 1.89
STRADA-215ENST00000580288 NUP160Q12769 1436 aa26.83■■□□□ 1.89
STRADA-215ENST00000580288 CEP170Q5SW79 1584 aa26.83■■□□□ 1.89
STRADA-215ENST00000580288 TRHP20396 242 aaPredicted RBP26.79■■□□□ 1.88
STRADA-215ENST00000580288 SHROOM2Q13796 1616 aa26.72■■□□□ 1.87
STRADA-215ENST00000580288 ERCC6L2Q5T890 1561 aa26.71■■□□□ 1.87
STRADA-215ENST00000580288 RUSC2Q8N2Y8 1516 aa26.59■■□□□ 1.85
STRADA-215ENST00000580288 KIF27Q86VH2 1401 aa26.55■■□□□ 1.84
STRADA-215ENST00000580288 PRG4Q92954 1404 aaPredicted RBP26.53■■□□□ 1.84
STRADA-215ENST00000580288 CUL7Q14999 1698 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 234.5 ms