RNA–Protein interactions for RNA: ENST00000580218.5

DHX40-208, Transcript of DEAH-box helicase 40, humanhuman

TSL 5

Gene DHX40, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-208ENST00000580218 NISCHQ9Y2I1 1504 aa33.07■■■□□ 2.89
DHX40-208ENST00000580218 CCDC180Q9P1Z9 1646 aa29.46■■■□□ 2.31
DHX40-208ENST00000580218 ABCC9O60706 1549 aa28.59■■■□□ 2.17
DHX40-208ENST00000580218 ZCCHC6Q5VYS8 1495 aaKnown RBP27.63■■■□□ 2.01
DHX40-208ENST00000580218 NACADO15069 1562 aa27.57■■■□□ 2
DHX40-208ENST00000580218 RB1CC1Q8TDY2 1594 aa27.56■■■□□ 2
DHX40-208ENST00000580218 MYO15BQ96JP2 1530 aa27.49■■□□□ 1.99
DHX40-208ENST00000580218 DCAF1Q9Y4B6 1507 aa27.41■■□□□ 1.98
DHX40-208ENST00000580218 DCAF8L2P0C7V8 631 aa27.2■■□□□ 1.94
DHX40-208ENST00000580218 UNC13AQ9UPW8 1703 aa27.16■■□□□ 1.94
DHX40-208ENST00000580218 BICRAQ9NZM4 1560 aa26.91■■□□□ 1.9
DHX40-208ENST00000580218 SCRIBQ14160 1630 aa26.81■■□□□ 1.88
DHX40-208ENST00000580218 PABPN1Q86U42 306 aaKnown RBP eCLIP26.63■■□□□ 1.85
DHX40-208ENST00000580218 AEBP2Q6ZN18 517 aaPredicted RBP26.61■■□□□ 1.85
DHX40-208ENST00000580218 SHROOM4Q9ULL8 1493 aa26.51■■□□□ 1.83
DHX40-208ENST00000580218 DNAJC5BQ9UF47 199 aa26.21■■□□□ 1.79
DHX40-208ENST00000580218 EIF4G1Q04637 1599 aaKnown RBP26.09■■□□□ 1.77
DHX40-208ENST00000580218 CC2D2AQ9P2K1 1620 aa25.96■■□□□ 1.75
DHX40-208ENST00000580218 CECR2Q9BXF3 1484 aa25.78■■□□□ 1.72
DHX40-208ENST00000580218 SMARCA4P51532 1647 aa25.7■■□□□ 1.7
DHX40-208ENST00000580218 BAZ1AQ9NRL2 1556 aaPredicted RBP25.6■■□□□ 1.69
DHX40-208ENST00000580218 CHIC1Q5VXU3 224 aa25.52■■□□□ 1.68
DHX40-208ENST00000580218 MROH2BQ7Z745 1585 aa25.52■■□□□ 1.68
DHX40-208ENST00000580218 PEG3Q9GZU2 1588 aa25.49■■□□□ 1.67
DHX40-208ENST00000580218 ATAD2BQ9ULI0 1458 aa25.47■■□□□ 1.67
DHX40-208ENST00000580218 NCAPD3P42695 1498 aa25.44■■□□□ 1.66
DHX40-208ENST00000580218 SMARCA2P51531 1590 aa25.41■■□□□ 1.66
DHX40-208ENST00000580218 HMGXB3Q12766 1538 aa25.38■■□□□ 1.65
DHX40-208ENST00000580218 WIZO95785 1651 aa25.26■■□□□ 1.63
DHX40-208ENST00000580218 BAZ1BQ9UIG0 1483 aaKnown RBP25.21■■□□□ 1.63
DHX40-208ENST00000580218 RSF1Q96T23 1441 aaPredicted RBP25.2■■□□□ 1.62
DHX40-208ENST00000580218 TOP2AP11388 1531 aaKnown RBP24.97■■□□□ 1.59
DHX40-208ENST00000580218 NESP48681 1621 aa24.85■■□□□ 1.57
DHX40-208ENST00000580218 LAMC3Q9Y6N6 1575 aa24.76■■□□□ 1.55
DHX40-208ENST00000580218 KIF21AQ7Z4S6 1674 aa24.63■■□□□ 1.53
DHX40-208ENST00000580218 CCDC88BA6NC98 1476 aa24.63■■□□□ 1.53
DHX40-208ENST00000580218 CADPSQ9ULU8 1353 aa24.62■■□□□ 1.53
DHX40-208ENST00000580218 CFTRP13569 1480 aa24.58■■□□□ 1.53
DHX40-208ENST00000580218 THOC2Q8NI27 1593 aaKnown RBP24.56■■□□□ 1.52
DHX40-208ENST00000580218 ERCC6Q03468 1493 aa24.54■■□□□ 1.52
DHX40-208ENST00000580218 PRDM2Q13029 1718 aa24.54■■□□□ 1.52
DHX40-208ENST00000580218 PDS5BQ9NTI5 1447 aa24.45■■□□□ 1.51
DHX40-208ENST00000580218 FANCD2Q9BXW9 1451 aa24.38■■□□□ 1.49
DHX40-208ENST00000580218 CUX2O14529 1486 aa24.37■■□□□ 1.49
DHX40-208ENST00000580218 SUPT5HO00267 1087 aaKnown RBP24.35■■□□□ 1.49
DHX40-208ENST00000580218 CEP164Q9UPV0 1460 aa24.33■■□□□ 1.49
DHX40-208ENST00000580218 WDR62O43379 1518 aa24.32■■□□□ 1.48
DHX40-208ENST00000580218 MRC2Q9UBG0 1479 aa24.32■■□□□ 1.48
DHX40-208ENST00000580218 URB2Q14146 1524 aaKnown RBP24.22■■□□□ 1.47
DHX40-208ENST00000580218 TOPBP1Q92547 1522 aa24.05■■□□□ 1.44
DHX40-208ENST00000580218 DNMBPQ6XZF7 1577 aa24.04■■□□□ 1.44
DHX40-208ENST00000580218 CUX1P39880 1505 aa23.94■■□□□ 1.42
DHX40-208ENST00000580218 ABCC8Q09428 1581 aa23.93■■□□□ 1.42
DHX40-208ENST00000580218 TARBP1Q13395 1621 aaKnown RBP23.88■■□□□ 1.41
DHX40-208ENST00000580218 POLA1P09884 1462 aaPredicted RBP23.86■■□□□ 1.41
DHX40-208ENST00000580218 IFT140Q96RY7 1462 aa23.81■■□□□ 1.4
DHX40-208ENST00000580218 BIVM-ERCC5R4GMW8 1640 aa23.8■■□□□ 1.4
DHX40-208ENST00000580218 FGD5Q6ZNL6 1462 aa23.8■■□□□ 1.4
DHX40-208ENST00000580218 ZNF608Q9ULD9 1512 aaPredicted RBP23.79■■□□□ 1.4
DHX40-208ENST00000580218 SYNJ1O43426 1573 aa23.78■■□□□ 1.4
DHX40-208ENST00000580218 WDR97A6NE52 1622 aa23.77■■□□□ 1.4
DHX40-208ENST00000580218 EIF4G3O43432 1585 aaKnown RBP23.75■■□□□ 1.39
DHX40-208ENST00000580218 TOP2BQ02880 1626 aa23.74■■□□□ 1.39
DHX40-208ENST00000580218 RAD54L2Q9Y4B4 1467 aa23.72■■□□□ 1.39
DHX40-208ENST00000580218 WRNQ14191 1432 aaPredicted RBP eCLIP23.68■■□□□ 1.38
DHX40-208ENST00000580218 SOGA1O94964 1423 aa23.63■■□□□ 1.37
DHX40-208ENST00000580218 AQRO60306 1485 aaKnown RBP eCLIP23.58■■□□□ 1.37
DHX40-208ENST00000580218 ABCA5Q8WWZ7 1642 aa23.58■■□□□ 1.36
DHX40-208ENST00000580218 ABCA10Q8WWZ4 1543 aa23.57■■□□□ 1.36
DHX40-208ENST00000580218 TDRD9Q8NDG6 1382 aaKnown RBP23.51■■□□□ 1.35
DHX40-208ENST00000580218 PBRM1Q86U86 1689 aa23.51■■□□□ 1.35
DHX40-208ENST00000580218 CHD1O14646 1710 aa23.45■■□□□ 1.34
DHX40-208ENST00000580218 DNAJC5Q9H3Z4 198 aa23.43■■□□□ 1.34
DHX40-208ENST00000580218 GAPVD1Q14C86 1478 aa23.41■■□□□ 1.34
DHX40-208ENST00000580218 SNAPC4Q5SXM2 1469 aa23.4■■□□□ 1.34
DHX40-208ENST00000580218 GRIN2BQ13224 1484 aa23.39■■□□□ 1.34
DHX40-208ENST00000580218 MAGI1Q96QZ7 1491 aaPredicted RBP23.36■■□□□ 1.33
DHX40-208ENST00000580218 ADAMTS12P58397 1594 aa23.32■■□□□ 1.32
DHX40-208ENST00000580218 ERICH3Q5RHP9 1530 aa23.28■■□□□ 1.32
DHX40-208ENST00000580218 SYNJ2O15056 1496 aa23.26■■□□□ 1.31
DHX40-208ENST00000580218 CLASP1Q7Z460 1538 aa23.2■■□□□ 1.3
DHX40-208ENST00000580218 OSCARQ8IYS5 282 aa23.17■■□□□ 1.3
DHX40-208ENST00000580218 GRIN2AQ12879 1464 aa23.15■■□□□ 1.3
DHX40-208ENST00000580218 KIF27Q86VH2 1401 aa23.14■■□□□ 1.29
DHX40-208ENST00000580218 FHAD1B1AJZ9 1412 aa23.13■■□□□ 1.29
DHX40-208ENST00000580218 CEP170Q5SW79 1584 aa23.11■■□□□ 1.29
DHX40-208ENST00000580218 CUL7Q14999 1698 aa23.11■■□□□ 1.29
DHX40-208ENST00000580218 RUSC2Q8N2Y8 1516 aa23.09■■□□□ 1.29
DHX40-208ENST00000580218 IGF1RP08069 1367 aa23.08■■□□□ 1.29
DHX40-208ENST00000580218 NUP160Q12769 1436 aa23.08■■□□□ 1.28
DHX40-208ENST00000580218 RIMBP3CA6NJZ7 1639 aa23.06■■□□□ 1.28
DHX40-208ENST00000580218 RIMBP3BA6NNM3 1639 aa23.06■■□□□ 1.28
DHX40-208ENST00000580218 RIMBP3Q9UFD9 1639 aa23.06■■□□□ 1.28
DHX40-208ENST00000580218 FBLN2P98095 1184 aa23.05■■□□□ 1.28
DHX40-208ENST00000580218 ARHGEF11O15085 1522 aa23.03■■□□□ 1.28
DHX40-208ENST00000580218 CHMP7Q8WUX9 453 aaPredicted RBP23.03■■□□□ 1.28
DHX40-208ENST00000580218 SHROOM2Q13796 1616 aa22.98■■□□□ 1.27
DHX40-208ENST00000580218 TRIM41Q8WV44 630 aa22.97■■□□□ 1.27
DHX40-208ENST00000580218 ERCC6L2Q5T890 1561 aa22.89■■□□□ 1.26
DHX40-208ENST00000580218 CARMIL1Q5VZK9 1371 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms