RNA–Protein interactions for RNA: ENST00000580171.2

RN7SL336P-201, Transcript of RNA, 7SL, cytoplasmic 336, pseudogene, humanhuman

BASIC

Gene RN7SL336P, Length 297 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL336P-201ENST00000580171 NISCHQ9Y2I1 1504 aa28.57■■■□□ 2.16
RN7SL336P-201ENST00000580171 CCDC180Q9P1Z9 1646 aa25.66■■□□□ 1.7
RN7SL336P-201ENST00000580171 ABCC9O60706 1549 aa25.47■■□□□ 1.67
RN7SL336P-201ENST00000580171 RB1CC1Q8TDY2 1594 aa24.36■■□□□ 1.49
RN7SL336P-201ENST00000580171 NACADO15069 1562 aa24.2■■□□□ 1.47
RN7SL336P-201ENST00000580171 DCAF8L2P0C7V8 631 aa23.98■■□□□ 1.43
RN7SL336P-201ENST00000580171 MYO15BQ96JP2 1530 aa23.93■■□□□ 1.42
RN7SL336P-201ENST00000580171 ZCCHC6Q5VYS8 1495 aaKnown RBP23.74■■□□□ 1.39
RN7SL336P-201ENST00000580171 UNC13AQ9UPW8 1703 aa23.7■■□□□ 1.39
RN7SL336P-201ENST00000580171 PABPN1Q86U42 306 aaKnown RBP eCLIP23.66■■□□□ 1.38
RN7SL336P-201ENST00000580171 DCAF1Q9Y4B6 1507 aa23.65■■□□□ 1.38
RN7SL336P-201ENST00000580171 DNAJC5BQ9UF47 199 aa23.65■■□□□ 1.38
RN7SL336P-201ENST00000580171 BICRAQ9NZM4 1560 aa23.57■■□□□ 1.36
RN7SL336P-201ENST00000580171 SHROOM4Q9ULL8 1493 aa23.42■■□□□ 1.34
RN7SL336P-201ENST00000580171 SCRIBQ14160 1630 aa23.33■■□□□ 1.33
RN7SL336P-201ENST00000580171 EIF4G1Q04637 1599 aaKnown RBP23.03■■□□□ 1.28
RN7SL336P-201ENST00000580171 CC2D2AQ9P2K1 1620 aa23.02■■□□□ 1.28
RN7SL336P-201ENST00000580171 CECR2Q9BXF3 1484 aa22.96■■□□□ 1.27
RN7SL336P-201ENST00000580171 NCAPD3P42695 1498 aa22.31■■□□□ 1.16
RN7SL336P-201ENST00000580171 SMARCA4P51532 1647 aa22.28■■□□□ 1.16
RN7SL336P-201ENST00000580171 ATAD2BQ9ULI0 1458 aa22.26■■□□□ 1.15
RN7SL336P-201ENST00000580171 SMARCA2P51531 1590 aa22.25■■□□□ 1.15
RN7SL336P-201ENST00000580171 BAZ1AQ9NRL2 1556 aaPredicted RBP22.22■■□□□ 1.15
RN7SL336P-201ENST00000580171 HMGXB3Q12766 1538 aa22.21■■□□□ 1.15
RN7SL336P-201ENST00000580171 BAZ1BQ9UIG0 1483 aaKnown RBP22.09■■□□□ 1.13
RN7SL336P-201ENST00000580171 PEG3Q9GZU2 1588 aa22.08■■□□□ 1.12
RN7SL336P-201ENST00000580171 ERCC6Q03468 1493 aa22.05■■□□□ 1.12
RN7SL336P-201ENST00000580171 MROH2BQ7Z745 1585 aa21.99■■□□□ 1.11
RN7SL336P-201ENST00000580171 CUX2O14529 1486 aa21.97■■□□□ 1.11
RN7SL336P-201ENST00000580171 NESP48681 1621 aa21.88■■□□□ 1.09
RN7SL336P-201ENST00000580171 LAMC3Q9Y6N6 1575 aa21.83■■□□□ 1.09
RN7SL336P-201ENST00000580171 DNAJC5Q9H3Z4 198 aa21.72■■□□□ 1.07
RN7SL336P-201ENST00000580171 WIZO95785 1651 aa21.72■■□□□ 1.07
RN7SL336P-201ENST00000580171 THOC2Q8NI27 1593 aaKnown RBP21.7■■□□□ 1.06
RN7SL336P-201ENST00000580171 PDS5BQ9NTI5 1447 aa21.7■■□□□ 1.06
RN7SL336P-201ENST00000580171 CADPSQ9ULU8 1353 aa21.63■■□□□ 1.05
RN7SL336P-201ENST00000580171 KIF21AQ7Z4S6 1674 aa21.63■■□□□ 1.05
RN7SL336P-201ENST00000580171 RSF1Q96T23 1441 aaPredicted RBP21.57■■□□□ 1.04
RN7SL336P-201ENST00000580171 TOP2AP11388 1531 aaKnown RBP21.52■■□□□ 1.04
RN7SL336P-201ENST00000580171 MRC2Q9UBG0 1479 aa21.51■■□□□ 1.03
RN7SL336P-201ENST00000580171 CEP164Q9UPV0 1460 aa21.45■■□□□ 1.03
RN7SL336P-201ENST00000580171 WDR62O43379 1518 aa21.45■■□□□ 1.02
RN7SL336P-201ENST00000580171 CFTRP13569 1480 aa21.42■■□□□ 1.02
RN7SL336P-201ENST00000580171 FANCD2Q9BXW9 1451 aa21.41■■□□□ 1.02
RN7SL336P-201ENST00000580171 PRDM2Q13029 1718 aa21.24■□□□□ 0.99
RN7SL336P-201ENST00000580171 CCDC88BA6NC98 1476 aa21.21■□□□□ 0.99
RN7SL336P-201ENST00000580171 URB2Q14146 1524 aaKnown RBP21.19■□□□□ 0.98
RN7SL336P-201ENST00000580171 IFT140Q96RY7 1462 aa21.01■□□□□ 0.95
RN7SL336P-201ENST00000580171 ABCC8Q09428 1581 aa21.01■□□□□ 0.95
RN7SL336P-201ENST00000580171 TOPBP1Q92547 1522 aa21■□□□□ 0.95
RN7SL336P-201ENST00000580171 DNMBPQ6XZF7 1577 aa20.97■□□□□ 0.95
RN7SL336P-201ENST00000580171 ZNF608Q9ULD9 1512 aaPredicted RBP20.9■□□□□ 0.94
RN7SL336P-201ENST00000580171 OSCARQ8IYS5 282 aa20.9■□□□□ 0.94
RN7SL336P-201ENST00000580171 EIF4G3O43432 1585 aaKnown RBP20.86■□□□□ 0.93
RN7SL336P-201ENST00000580171 TRIM41Q8WV44 630 aa20.83■□□□□ 0.93
RN7SL336P-201ENST00000580171 POLA1P09884 1462 aaPredicted RBP20.81■□□□□ 0.92
RN7SL336P-201ENST00000580171 TARBP1Q13395 1621 aaKnown RBP20.8■□□□□ 0.92
RN7SL336P-201ENST00000580171 AQRO60306 1485 aaKnown RBP eCLIP20.71■□□□□ 0.91
RN7SL336P-201ENST00000580171 WDR97A6NE52 1622 aa20.69■□□□□ 0.9
RN7SL336P-201ENST00000580171 FGD5Q6ZNL6 1462 aa20.69■□□□□ 0.9
RN7SL336P-201ENST00000580171 SOGA1O94964 1423 aa20.68■□□□□ 0.9
RN7SL336P-201ENST00000580171 RAD54L2Q9Y4B4 1467 aa20.68■□□□□ 0.9
RN7SL336P-201ENST00000580171 CUX1P39880 1505 aa20.67■□□□□ 0.9
RN7SL336P-201ENST00000580171 RIMBP3CA6NJZ7 1639 aa20.65■□□□□ 0.9
RN7SL336P-201ENST00000580171 RIMBP3BA6NNM3 1639 aa20.65■□□□□ 0.9
RN7SL336P-201ENST00000580171 RIMBP3Q9UFD9 1639 aa20.65■□□□□ 0.9
RN7SL336P-201ENST00000580171 SUPT5HO00267 1087 aaKnown RBP20.65■□□□□ 0.9
RN7SL336P-201ENST00000580171 CHD1O14646 1710 aa20.64■□□□□ 0.89
RN7SL336P-201ENST00000580171 ARHGEF11O15085 1522 aa20.63■□□□□ 0.89
RN7SL336P-201ENST00000580171 TDRD9Q8NDG6 1382 aaKnown RBP20.6■□□□□ 0.89
RN7SL336P-201ENST00000580171 SNAPC4Q5SXM2 1469 aa20.57■□□□□ 0.88
RN7SL336P-201ENST00000580171 FBLN2P98095 1184 aa20.57■□□□□ 0.88
RN7SL336P-201ENST00000580171 MAGI1Q96QZ7 1491 aaPredicted RBP20.55■□□□□ 0.88
RN7SL336P-201ENST00000580171 GRIN2BQ13224 1484 aa20.54■□□□□ 0.88
RN7SL336P-201ENST00000580171 ABCA10Q8WWZ4 1543 aa20.48■□□□□ 0.87
RN7SL336P-201ENST00000580171 SYNJ1O43426 1573 aa20.46■□□□□ 0.87
RN7SL336P-201ENST00000580171 SYNJ2O15056 1496 aa20.46■□□□□ 0.87
RN7SL336P-201ENST00000580171 GAPVD1Q14C86 1478 aa20.46■□□□□ 0.87
RN7SL336P-201ENST00000580171 PBRM1Q86U86 1689 aa20.45■□□□□ 0.86
RN7SL336P-201ENST00000580171 CHMP7Q8WUX9 453 aaPredicted RBP20.45■□□□□ 0.86
RN7SL336P-201ENST00000580171 ABCA5Q8WWZ7 1642 aa20.44■□□□□ 0.86
RN7SL336P-201ENST00000580171 CLASP1Q7Z460 1538 aa20.43■□□□□ 0.86
RN7SL336P-201ENST00000580171 WRNQ14191 1432 aaPredicted RBP eCLIP20.42■□□□□ 0.86
RN7SL336P-201ENST00000580171 ARAP1Q96P48 1450 aa20.41■□□□□ 0.86
RN7SL336P-201ENST00000580171 TOP2BQ02880 1626 aa20.4■□□□□ 0.86
RN7SL336P-201ENST00000580171 BIVM-ERCC5R4GMW8 1640 aa20.39■□□□□ 0.86
RN7SL336P-201ENST00000580171 CYB5RLQ6IPT4 315 aa20.38■□□□□ 0.85
RN7SL336P-201ENST00000580171 ADAMTS12P58397 1594 aa20.3■□□□□ 0.84
RN7SL336P-201ENST00000580171 GRIN2AQ12879 1464 aa20.27■□□□□ 0.84
RN7SL336P-201ENST00000580171 ERICH3Q5RHP9 1530 aa20.23■□□□□ 0.83
RN7SL336P-201ENST00000580171 FHAD1B1AJZ9 1412 aa20.22■□□□□ 0.83
RN7SL336P-201ENST00000580171 NUP160Q12769 1436 aa20.19■□□□□ 0.82
RN7SL336P-201ENST00000580171 CEP170Q5SW79 1584 aa20.17■□□□□ 0.82
RN7SL336P-201ENST00000580171 TRHP20396 242 aaPredicted RBP20.16■□□□□ 0.82
RN7SL336P-201ENST00000580171 SHROOM2Q13796 1616 aa20.09■□□□□ 0.81
RN7SL336P-201ENST00000580171 ERCC6L2Q5T890 1561 aa20.06■□□□□ 0.8
RN7SL336P-201ENST00000580171 RUSC2Q8N2Y8 1516 aa20.02■□□□□ 0.79
RN7SL336P-201ENST00000580171 KIF27Q86VH2 1401 aa20.02■□□□□ 0.79
RN7SL336P-201ENST00000580171 CUL7Q14999 1698 aa19.99■□□□□ 0.79
RN7SL336P-201ENST00000580171 PRG4Q92954 1404 aaPredicted RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms