RNA–Protein interactions for RNA: ENST00000580075.1

CASKIN2-204, Transcript of CASK interacting protein 2, humanhuman

TSL 4

Gene CASKIN2, Length 530 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN2-204ENST00000580075 NISCHQ9Y2I1 1504 aa32.13■■■□□ 2.73
CASKIN2-204ENST00000580075 CCDC180Q9P1Z9 1646 aa29.02■■■□□ 2.24
CASKIN2-204ENST00000580075 ABCC9O60706 1549 aa28.94■■■□□ 2.22
CASKIN2-204ENST00000580075 RB1CC1Q8TDY2 1594 aa27.58■■■□□ 2.01
CASKIN2-204ENST00000580075 NACADO15069 1562 aa27.35■■□□□ 1.97
CASKIN2-204ENST00000580075 UNC13AQ9UPW8 1703 aa27.06■■□□□ 1.92
CASKIN2-204ENST00000580075 DNAJC5BQ9UF47 199 aa27.05■■□□□ 1.92
CASKIN2-204ENST00000580075 DCAF8L2P0C7V8 631 aa26.99■■□□□ 1.91
CASKIN2-204ENST00000580075 MYO15BQ96JP2 1530 aa26.92■■□□□ 1.9
CASKIN2-204ENST00000580075 PABPN1Q86U42 306 aaKnown RBP eCLIP26.81■■□□□ 1.88
CASKIN2-204ENST00000580075 BICRAQ9NZM4 1560 aa26.75■■□□□ 1.87
CASKIN2-204ENST00000580075 ZCCHC6Q5VYS8 1495 aaKnown RBP26.66■■□□□ 1.86
CASKIN2-204ENST00000580075 DCAF1Q9Y4B6 1507 aa26.55■■□□□ 1.84
CASKIN2-204ENST00000580075 SHROOM4Q9ULL8 1493 aa26.42■■□□□ 1.82
CASKIN2-204ENST00000580075 SCRIBQ14160 1630 aa26.38■■□□□ 1.81
CASKIN2-204ENST00000580075 CC2D2AQ9P2K1 1620 aa26.19■■□□□ 1.78
CASKIN2-204ENST00000580075 EIF4G1Q04637 1599 aaKnown RBP26.11■■□□□ 1.77
CASKIN2-204ENST00000580075 CECR2Q9BXF3 1484 aa26.07■■□□□ 1.76
CASKIN2-204ENST00000580075 NCAPD3P42695 1498 aa25.16■■□□□ 1.62
CASKIN2-204ENST00000580075 SMARCA4P51532 1647 aa25.15■■□□□ 1.62
CASKIN2-204ENST00000580075 ATAD2BQ9ULI0 1458 aa25.1■■□□□ 1.61
CASKIN2-204ENST00000580075 SMARCA2P51531 1590 aa25.1■■□□□ 1.61
CASKIN2-204ENST00000580075 HMGXB3Q12766 1538 aa25.09■■□□□ 1.61
CASKIN2-204ENST00000580075 ERCC6Q03468 1493 aa25.02■■□□□ 1.6
CASKIN2-204ENST00000580075 CUX2O14529 1486 aa25■■□□□ 1.59
CASKIN2-204ENST00000580075 BAZ1AQ9NRL2 1556 aaPredicted RBP24.99■■□□□ 1.59
CASKIN2-204ENST00000580075 DNAJC5Q9H3Z4 198 aa24.91■■□□□ 1.58
CASKIN2-204ENST00000580075 BAZ1BQ9UIG0 1483 aaKnown RBP24.89■■□□□ 1.58
CASKIN2-204ENST00000580075 PEG3Q9GZU2 1588 aa24.88■■□□□ 1.57
CASKIN2-204ENST00000580075 NESP48681 1621 aa24.83■■□□□ 1.57
CASKIN2-204ENST00000580075 MROH2BQ7Z745 1585 aa24.76■■□□□ 1.55
CASKIN2-204ENST00000580075 THOC2Q8NI27 1593 aaKnown RBP24.71■■□□□ 1.55
CASKIN2-204ENST00000580075 LAMC3Q9Y6N6 1575 aa24.71■■□□□ 1.55
CASKIN2-204ENST00000580075 KIF21AQ7Z4S6 1674 aa24.65■■□□□ 1.54
CASKIN2-204ENST00000580075 WIZO95785 1651 aa24.51■■□□□ 1.51
CASKIN2-204ENST00000580075 PDS5BQ9NTI5 1447 aa24.49■■□□□ 1.51
CASKIN2-204ENST00000580075 CADPSQ9ULU8 1353 aa24.37■■□□□ 1.49
CASKIN2-204ENST00000580075 MRC2Q9UBG0 1479 aa24.33■■□□□ 1.49
CASKIN2-204ENST00000580075 WDR62O43379 1518 aa24.3■■□□□ 1.48
CASKIN2-204ENST00000580075 CEP164Q9UPV0 1460 aa24.24■■□□□ 1.47
CASKIN2-204ENST00000580075 TOP2AP11388 1531 aaKnown RBP24.2■■□□□ 1.47
CASKIN2-204ENST00000580075 FANCD2Q9BXW9 1451 aa24.17■■□□□ 1.46
CASKIN2-204ENST00000580075 RSF1Q96T23 1441 aaPredicted RBP24.15■■□□□ 1.46
CASKIN2-204ENST00000580075 PRDM2Q13029 1718 aa24.12■■□□□ 1.45
CASKIN2-204ENST00000580075 CFTRP13569 1480 aa24.12■■□□□ 1.45
CASKIN2-204ENST00000580075 URB2Q14146 1524 aaKnown RBP23.99■■□□□ 1.43
CASKIN2-204ENST00000580075 TRIM41Q8WV44 630 aa23.84■■□□□ 1.41
CASKIN2-204ENST00000580075 CCDC88BA6NC98 1476 aa23.83■■□□□ 1.41
CASKIN2-204ENST00000580075 IFT140Q96RY7 1462 aa23.72■■□□□ 1.39
CASKIN2-204ENST00000580075 TOPBP1Q92547 1522 aa23.72■■□□□ 1.39
CASKIN2-204ENST00000580075 OSCARQ8IYS5 282 aa23.69■■□□□ 1.38
CASKIN2-204ENST00000580075 ZNF608Q9ULD9 1512 aaPredicted RBP23.68■■□□□ 1.38
CASKIN2-204ENST00000580075 DNMBPQ6XZF7 1577 aa23.67■■□□□ 1.38
CASKIN2-204ENST00000580075 EIF4G3O43432 1585 aaKnown RBP23.66■■□□□ 1.38
CASKIN2-204ENST00000580075 ABCC8Q09428 1581 aa23.64■■□□□ 1.37
CASKIN2-204ENST00000580075 RIMBP3CA6NJZ7 1639 aa23.59■■□□□ 1.37
CASKIN2-204ENST00000580075 RIMBP3BA6NNM3 1639 aa23.59■■□□□ 1.37
CASKIN2-204ENST00000580075 RIMBP3Q9UFD9 1639 aa23.59■■□□□ 1.37
CASKIN2-204ENST00000580075 TARBP1Q13395 1621 aaKnown RBP23.55■■□□□ 1.36
CASKIN2-204ENST00000580075 CHD1O14646 1710 aa23.53■■□□□ 1.36
CASKIN2-204ENST00000580075 SUPT5HO00267 1087 aaKnown RBP23.51■■□□□ 1.35
CASKIN2-204ENST00000580075 POLA1P09884 1462 aaPredicted RBP23.47■■□□□ 1.35
CASKIN2-204ENST00000580075 ARHGEF11O15085 1522 aa23.47■■□□□ 1.35
CASKIN2-204ENST00000580075 AQRO60306 1485 aaKnown RBP eCLIP23.41■■□□□ 1.34
CASKIN2-204ENST00000580075 WDR97A6NE52 1622 aa23.35■■□□□ 1.33
CASKIN2-204ENST00000580075 RAD54L2Q9Y4B4 1467 aa23.34■■□□□ 1.33
CASKIN2-204ENST00000580075 FGD5Q6ZNL6 1462 aa23.32■■□□□ 1.32
CASKIN2-204ENST00000580075 SOGA1O94964 1423 aa23.29■■□□□ 1.32
CASKIN2-204ENST00000580075 CUX1P39880 1505 aa23.28■■□□□ 1.32
CASKIN2-204ENST00000580075 SNAPC4Q5SXM2 1469 aa23.25■■□□□ 1.31
CASKIN2-204ENST00000580075 FBLN2P98095 1184 aa23.23■■□□□ 1.31
CASKIN2-204ENST00000580075 TDRD9Q8NDG6 1382 aaKnown RBP23.23■■□□□ 1.31
CASKIN2-204ENST00000580075 ARAP1Q96P48 1450 aa23.23■■□□□ 1.31
CASKIN2-204ENST00000580075 PBRM1Q86U86 1689 aa23.21■■□□□ 1.31
CASKIN2-204ENST00000580075 MAGI1Q96QZ7 1491 aaPredicted RBP23.19■■□□□ 1.3
CASKIN2-204ENST00000580075 CLASP1Q7Z460 1538 aa23.18■■□□□ 1.3
CASKIN2-204ENST00000580075 SYNJ1O43426 1573 aa23.18■■□□□ 1.3
CASKIN2-204ENST00000580075 CYB5RLQ6IPT4 315 aa23.15■■□□□ 1.3
CASKIN2-204ENST00000580075 GRIN2BQ13224 1484 aa23.15■■□□□ 1.3
CASKIN2-204ENST00000580075 ABCA5Q8WWZ7 1642 aa23.1■■□□□ 1.29
CASKIN2-204ENST00000580075 SYNJ2O15056 1496 aa23.09■■□□□ 1.29
CASKIN2-204ENST00000580075 GAPVD1Q14C86 1478 aa23.05■■□□□ 1.28
CASKIN2-204ENST00000580075 CHMP7Q8WUX9 453 aaPredicted RBP23.04■■□□□ 1.28
CASKIN2-204ENST00000580075 ABCA10Q8WWZ4 1543 aa23.03■■□□□ 1.28
CASKIN2-204ENST00000580075 BIVM-ERCC5R4GMW8 1640 aa22.97■■□□□ 1.27
CASKIN2-204ENST00000580075 TRHP20396 242 aaPredicted RBP22.94■■□□□ 1.26
CASKIN2-204ENST00000580075 ADAMTS12P58397 1594 aa22.93■■□□□ 1.26
CASKIN2-204ENST00000580075 TOP2BQ02880 1626 aa22.92■■□□□ 1.26
CASKIN2-204ENST00000580075 WRNQ14191 1432 aaPredicted RBP eCLIP22.88■■□□□ 1.25
CASKIN2-204ENST00000580075 GRIN2AQ12879 1464 aa22.87■■□□□ 1.25
CASKIN2-204ENST00000580075 CEP170Q5SW79 1584 aa22.83■■□□□ 1.25
CASKIN2-204ENST00000580075 ERCC6L2Q5T890 1561 aa22.79■■□□□ 1.24
CASKIN2-204ENST00000580075 ERICH3Q5RHP9 1530 aa22.77■■□□□ 1.24
CASKIN2-204ENST00000580075 NUP160Q12769 1436 aa22.77■■□□□ 1.24
CASKIN2-204ENST00000580075 SHROOM2Q13796 1616 aa22.77■■□□□ 1.24
CASKIN2-204ENST00000580075 FHAD1B1AJZ9 1412 aa22.74■■□□□ 1.23
CASKIN2-204ENST00000580075 RUSC2Q8N2Y8 1516 aa22.62■■□□□ 1.21
CASKIN2-204ENST00000580075 KIF13AQ9H1H9 1805 aa22.53■■□□□ 1.2
CASKIN2-204ENST00000580075 PRG4Q92954 1404 aaPredicted RBP22.53■■□□□ 1.2
CASKIN2-204ENST00000580075 CUL7Q14999 1698 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms