RNA–Protein interactions for RNA: ENST00000580030.1

DHX40-207, Transcript of DEAH-box helicase 40, humanhuman

TSL 5

Gene DHX40, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-207ENST00000580030 NISCHQ9Y2I1 1504 aa43.43■■■■■ 4.54
DHX40-207ENST00000580030 CCDC180Q9P1Z9 1646 aa38.63■■■■□ 3.77
DHX40-207ENST00000580030 ABCC9O60706 1549 aa37.83■■■■□ 3.65
DHX40-207ENST00000580030 RB1CC1Q8TDY2 1594 aa36.4■■■■□ 3.42
DHX40-207ENST00000580030 NACADO15069 1562 aa36.35■■■■□ 3.41
DHX40-207ENST00000580030 DCAF8L2P0C7V8 631 aa36.34■■■■□ 3.41
DHX40-207ENST00000580030 ZCCHC6Q5VYS8 1495 aaKnown RBP36.15■■■■□ 3.38
DHX40-207ENST00000580030 MYO15BQ96JP2 1530 aa36.12■■■■□ 3.37
DHX40-207ENST00000580030 DCAF1Q9Y4B6 1507 aa35.94■■■■□ 3.34
DHX40-207ENST00000580030 UNC13AQ9UPW8 1703 aa35.49■■■■□ 3.27
DHX40-207ENST00000580030 PABPN1Q86U42 306 aaKnown RBP eCLIP35.35■■■■□ 3.25
DHX40-207ENST00000580030 BICRAQ9NZM4 1560 aa35.25■■■■□ 3.23
DHX40-207ENST00000580030 SCRIBQ14160 1630 aa35.22■■■■□ 3.23
DHX40-207ENST00000580030 SHROOM4Q9ULL8 1493 aa34.93■■■■□ 3.18
DHX40-207ENST00000580030 DNAJC5BQ9UF47 199 aa34.74■■■■□ 3.15
DHX40-207ENST00000580030 EIF4G1Q04637 1599 aaKnown RBP34.35■■■■□ 3.09
DHX40-207ENST00000580030 CC2D2AQ9P2K1 1620 aa34.21■■■■□ 3.07
DHX40-207ENST00000580030 CECR2Q9BXF3 1484 aa34.01■■■■□ 3.03
DHX40-207ENST00000580030 SMARCA4P51532 1647 aa33.69■■■□□ 2.98
DHX40-207ENST00000580030 BAZ1AQ9NRL2 1556 aaPredicted RBP33.68■■■□□ 2.98
DHX40-207ENST00000580030 NCAPD3P42695 1498 aa33.54■■■□□ 2.96
DHX40-207ENST00000580030 ATAD2BQ9ULI0 1458 aa33.54■■■□□ 2.96
DHX40-207ENST00000580030 SMARCA2P51531 1590 aa33.51■■■□□ 2.95
DHX40-207ENST00000580030 MROH2BQ7Z745 1585 aa33.45■■■□□ 2.95
DHX40-207ENST00000580030 PEG3Q9GZU2 1588 aa33.37■■■□□ 2.93
DHX40-207ENST00000580030 HMGXB3Q12766 1538 aa33.36■■■□□ 2.93
DHX40-207ENST00000580030 BAZ1BQ9UIG0 1483 aaKnown RBP33.27■■■□□ 2.92
DHX40-207ENST00000580030 WIZO95785 1651 aa33.07■■■□□ 2.89
DHX40-207ENST00000580030 RSF1Q96T23 1441 aaPredicted RBP33.07■■■□□ 2.88
DHX40-207ENST00000580030 TOP2AP11388 1531 aaKnown RBP32.75■■■□□ 2.83
DHX40-207ENST00000580030 NESP48681 1621 aa32.7■■■□□ 2.83
DHX40-207ENST00000580030 LAMC3Q9Y6N6 1575 aa32.66■■■□□ 2.82
DHX40-207ENST00000580030 ERCC6Q03468 1493 aa32.64■■■□□ 2.82
DHX40-207ENST00000580030 CADPSQ9ULU8 1353 aa32.57■■■□□ 2.8
DHX40-207ENST00000580030 PDS5BQ9NTI5 1447 aa32.47■■■□□ 2.79
DHX40-207ENST00000580030 CCDC88BA6NC98 1476 aa32.37■■■□□ 2.77
DHX40-207ENST00000580030 CFTRP13569 1480 aa32.35■■■□□ 2.77
DHX40-207ENST00000580030 CUX2O14529 1486 aa32.31■■■□□ 2.76
DHX40-207ENST00000580030 KIF21AQ7Z4S6 1674 aa32.3■■■□□ 2.76
DHX40-207ENST00000580030 SUPT5HO00267 1087 aaKnown RBP32.23■■■□□ 2.75
DHX40-207ENST00000580030 THOC2Q8NI27 1593 aaKnown RBP32.22■■■□□ 2.75
DHX40-207ENST00000580030 FANCD2Q9BXW9 1451 aa32.18■■■□□ 2.74
DHX40-207ENST00000580030 CEP164Q9UPV0 1460 aa32.16■■■□□ 2.74
DHX40-207ENST00000580030 MRC2Q9UBG0 1479 aa32.11■■■□□ 2.73
DHX40-207ENST00000580030 PRDM2Q13029 1718 aa32.06■■■□□ 2.72
DHX40-207ENST00000580030 WDR62O43379 1518 aa31.99■■■□□ 2.71
DHX40-207ENST00000580030 URB2Q14146 1524 aaKnown RBP31.84■■■□□ 2.69
DHX40-207ENST00000580030 ABCC8Q09428 1581 aa31.69■■■□□ 2.66
DHX40-207ENST00000580030 TOPBP1Q92547 1522 aa31.65■■■□□ 2.66
DHX40-207ENST00000580030 DNMBPQ6XZF7 1577 aa31.61■■■□□ 2.65
DHX40-207ENST00000580030 IFT140Q96RY7 1462 aa31.48■■■□□ 2.63
DHX40-207ENST00000580030 CUX1P39880 1505 aa31.39■■■□□ 2.61
DHX40-207ENST00000580030 POLA1P09884 1462 aaPredicted RBP31.38■■■□□ 2.61
DHX40-207ENST00000580030 DNAJC5Q9H3Z4 198 aa31.36■■■□□ 2.61
DHX40-207ENST00000580030 ZNF608Q9ULD9 1512 aaPredicted RBP31.3■■■□□ 2.6
DHX40-207ENST00000580030 FGD5Q6ZNL6 1462 aa31.3■■■□□ 2.6
DHX40-207ENST00000580030 TARBP1Q13395 1621 aaKnown RBP31.3■■■□□ 2.6
DHX40-207ENST00000580030 SOGA1O94964 1423 aa31.28■■■□□ 2.6
DHX40-207ENST00000580030 RAD54L2Q9Y4B4 1467 aa31.23■■■□□ 2.59
DHX40-207ENST00000580030 WRNQ14191 1432 aaPredicted RBP eCLIP31.2■■■□□ 2.59
DHX40-207ENST00000580030 EIF4G3O43432 1585 aaKnown RBP31.18■■■□□ 2.58
DHX40-207ENST00000580030 AQRO60306 1485 aaKnown RBP eCLIP31.14■■■□□ 2.58
DHX40-207ENST00000580030 TOP2BQ02880 1626 aa31.12■■■□□ 2.57
DHX40-207ENST00000580030 BIVM-ERCC5R4GMW8 1640 aa31.1■■■□□ 2.57
DHX40-207ENST00000580030 TDRD9Q8NDG6 1382 aaKnown RBP31.09■■■□□ 2.57
DHX40-207ENST00000580030 WDR97A6NE52 1622 aa31.08■■■□□ 2.57
DHX40-207ENST00000580030 SYNJ1O43426 1573 aa31.08■■■□□ 2.57
DHX40-207ENST00000580030 ABCA10Q8WWZ4 1543 aa31■■■□□ 2.55
DHX40-207ENST00000580030 OSCARQ8IYS5 282 aa30.98■■■□□ 2.55
DHX40-207ENST00000580030 GRIN2BQ13224 1484 aa30.92■■■□□ 2.54
DHX40-207ENST00000580030 GAPVD1Q14C86 1478 aa30.91■■■□□ 2.54
DHX40-207ENST00000580030 SNAPC4Q5SXM2 1469 aa30.86■■■□□ 2.53
DHX40-207ENST00000580030 ABCA5Q8WWZ7 1642 aa30.86■■■□□ 2.53
DHX40-207ENST00000580030 MAGI1Q96QZ7 1491 aaPredicted RBP30.84■■■□□ 2.53
DHX40-207ENST00000580030 FBLN2P98095 1184 aa30.82■■■□□ 2.52
DHX40-207ENST00000580030 PBRM1Q86U86 1689 aa30.8■■■□□ 2.52
DHX40-207ENST00000580030 CHD1O14646 1710 aa30.78■■■□□ 2.52
DHX40-207ENST00000580030 CHMP7Q8WUX9 453 aaPredicted RBP30.74■■■□□ 2.51
DHX40-207ENST00000580030 SYNJ2O15056 1496 aa30.71■■■□□ 2.51
DHX40-207ENST00000580030 ERICH3Q5RHP9 1530 aa30.63■■■□□ 2.49
DHX40-207ENST00000580030 ADAMTS12P58397 1594 aa30.57■■■□□ 2.48
DHX40-207ENST00000580030 KIF27Q86VH2 1401 aa30.56■■■□□ 2.48
DHX40-207ENST00000580030 FHAD1B1AJZ9 1412 aa30.56■■■□□ 2.48
DHX40-207ENST00000580030 GRIN2AQ12879 1464 aa30.5■■■□□ 2.47
DHX40-207ENST00000580030 CLASP1Q7Z460 1538 aa30.47■■■□□ 2.47
DHX40-207ENST00000580030 TRIM41Q8WV44 630 aa30.46■■■□□ 2.47
DHX40-207ENST00000580030 ARHGEF11O15085 1522 aa30.44■■■□□ 2.46
DHX40-207ENST00000580030 RIMBP3CA6NJZ7 1639 aa30.44■■■□□ 2.46
DHX40-207ENST00000580030 RIMBP3BA6NNM3 1639 aa30.44■■■□□ 2.46
DHX40-207ENST00000580030 RIMBP3Q9UFD9 1639 aa30.44■■■□□ 2.46
DHX40-207ENST00000580030 IGF1RP08069 1367 aa30.42■■■□□ 2.46
DHX40-207ENST00000580030 NUP160Q12769 1436 aa30.37■■■□□ 2.45
DHX40-207ENST00000580030 CUL7Q14999 1698 aa30.35■■■□□ 2.45
DHX40-207ENST00000580030 CEP170Q5SW79 1584 aa30.33■■■□□ 2.45
DHX40-207ENST00000580030 CARMIL1Q5VZK9 1371 aa30.26■■■□□ 2.43
DHX40-207ENST00000580030 RUSC2Q8N2Y8 1516 aa30.22■■■□□ 2.43
DHX40-207ENST00000580030 CYB5RLQ6IPT4 315 aa30.2■■■□□ 2.43
DHX40-207ENST00000580030 ARAP1Q96P48 1450 aa30.19■■■□□ 2.42
DHX40-207ENST00000580030 SHROOM2Q13796 1616 aa30.12■■■□□ 2.41
DHX40-207ENST00000580030 JPH4Q96JJ6 628 aa30.09■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms