RNA–Protein interactions for RNA: ENST00000580021.1

CASKIN2-203, Transcript of CASK interacting protein 2, humanhuman

TSL 3

Gene CASKIN2, Length 626 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN2-203ENST00000580021 NISCHQ9Y2I1 1504 aa46.38■■■■■ 5.02
CASKIN2-203ENST00000580021 ABCC9O60706 1549 aa41.59■■■■■ 4.25
CASKIN2-203ENST00000580021 CCDC180Q9P1Z9 1646 aa41.58■■■■■ 4.25
CASKIN2-203ENST00000580021 RB1CC1Q8TDY2 1594 aa39.55■■■■□ 3.92
CASKIN2-203ENST00000580021 NACADO15069 1562 aa39.28■■■■□ 3.88
CASKIN2-203ENST00000580021 DCAF8L2P0C7V8 631 aa39.26■■■■□ 3.88
CASKIN2-203ENST00000580021 DNAJC5BQ9UF47 199 aa38.97■■■■□ 3.83
CASKIN2-203ENST00000580021 UNC13AQ9UPW8 1703 aa38.79■■■■□ 3.8
CASKIN2-203ENST00000580021 PABPN1Q86U42 306 aaKnown RBP eCLIP38.76■■■■□ 3.8
CASKIN2-203ENST00000580021 MYO15BQ96JP2 1530 aa38.69■■■■□ 3.78
CASKIN2-203ENST00000580021 ZCCHC6Q5VYS8 1495 aaKnown RBP38.44■■■■□ 3.74
CASKIN2-203ENST00000580021 BICRAQ9NZM4 1560 aa38.43■■■■□ 3.74
CASKIN2-203ENST00000580021 DCAF1Q9Y4B6 1507 aa38.25■■■■□ 3.71
CASKIN2-203ENST00000580021 SCRIBQ14160 1630 aa37.97■■■■□ 3.67
CASKIN2-203ENST00000580021 SHROOM4Q9ULL8 1493 aa37.77■■■■□ 3.64
CASKIN2-203ENST00000580021 CC2D2AQ9P2K1 1620 aa37.56■■■■□ 3.6
CASKIN2-203ENST00000580021 EIF4G1Q04637 1599 aaKnown RBP37.46■■■■□ 3.59
CASKIN2-203ENST00000580021 CECR2Q9BXF3 1484 aa37.4■■■■□ 3.58
CASKIN2-203ENST00000580021 NCAPD3P42695 1498 aa36.26■■■■□ 3.4
CASKIN2-203ENST00000580021 SMARCA4P51532 1647 aa36.19■■■■□ 3.38
CASKIN2-203ENST00000580021 ATAD2BQ9ULI0 1458 aa36.18■■■■□ 3.38
CASKIN2-203ENST00000580021 SMARCA2P51531 1590 aa36.06■■■■□ 3.36
CASKIN2-203ENST00000580021 BAZ1AQ9NRL2 1556 aaPredicted RBP35.99■■■■□ 3.35
CASKIN2-203ENST00000580021 HMGXB3Q12766 1538 aa35.98■■■■□ 3.35
CASKIN2-203ENST00000580021 ERCC6Q03468 1493 aa35.86■■■■□ 3.33
CASKIN2-203ENST00000580021 BAZ1BQ9UIG0 1483 aaKnown RBP35.85■■■■□ 3.33
CASKIN2-203ENST00000580021 MROH2BQ7Z745 1585 aa35.79■■■■□ 3.32
CASKIN2-203ENST00000580021 PEG3Q9GZU2 1588 aa35.78■■■■□ 3.32
CASKIN2-203ENST00000580021 NESP48681 1621 aa35.76■■■■□ 3.32
CASKIN2-203ENST00000580021 CUX2O14529 1486 aa35.7■■■■□ 3.31
CASKIN2-203ENST00000580021 DNAJC5Q9H3Z4 198 aa35.66■■■■□ 3.3
CASKIN2-203ENST00000580021 LAMC3Q9Y6N6 1575 aa35.43■■■■□ 3.26
CASKIN2-203ENST00000580021 WIZO95785 1651 aa35.41■■■■□ 3.26
CASKIN2-203ENST00000580021 THOC2Q8NI27 1593 aaKnown RBP35.33■■■■□ 3.25
CASKIN2-203ENST00000580021 KIF21AQ7Z4S6 1674 aa35.32■■■■□ 3.24
CASKIN2-203ENST00000580021 PDS5BQ9NTI5 1447 aa35.22■■■■□ 3.23
CASKIN2-203ENST00000580021 CADPSQ9ULU8 1353 aa35.17■■■■□ 3.22
CASKIN2-203ENST00000580021 RSF1Q96T23 1441 aaPredicted RBP35.05■■■■□ 3.2
CASKIN2-203ENST00000580021 MRC2Q9UBG0 1479 aa34.93■■■■□ 3.18
CASKIN2-203ENST00000580021 TOP2AP11388 1531 aaKnown RBP34.88■■■■□ 3.17
CASKIN2-203ENST00000580021 WDR62O43379 1518 aa34.84■■■■□ 3.17
CASKIN2-203ENST00000580021 CEP164Q9UPV0 1460 aa34.81■■■■□ 3.16
CASKIN2-203ENST00000580021 FANCD2Q9BXW9 1451 aa34.79■■■■□ 3.16
CASKIN2-203ENST00000580021 CFTRP13569 1480 aa34.78■■■■□ 3.16
CASKIN2-203ENST00000580021 PRDM2Q13029 1718 aa34.52■■■■□ 3.12
CASKIN2-203ENST00000580021 URB2Q14146 1524 aaKnown RBP34.52■■■■□ 3.12
CASKIN2-203ENST00000580021 CCDC88BA6NC98 1476 aa34.52■■■■□ 3.12
CASKIN2-203ENST00000580021 TRIM41Q8WV44 630 aa34.21■■■■□ 3.07
CASKIN2-203ENST00000580021 OSCARQ8IYS5 282 aa34.16■■■■□ 3.06
CASKIN2-203ENST00000580021 TOPBP1Q92547 1522 aa34.15■■■■□ 3.06
CASKIN2-203ENST00000580021 ZNF608Q9ULD9 1512 aaPredicted RBP34.1■■■■□ 3.05
CASKIN2-203ENST00000580021 IFT140Q96RY7 1462 aa34.1■■■■□ 3.05
CASKIN2-203ENST00000580021 ABCC8Q09428 1581 aa34.03■■■■□ 3.04
CASKIN2-203ENST00000580021 DNMBPQ6XZF7 1577 aa34.02■■■■□ 3.04
CASKIN2-203ENST00000580021 EIF4G3O43432 1585 aaKnown RBP33.89■■■■□ 3.02
CASKIN2-203ENST00000580021 TARBP1Q13395 1621 aaKnown RBP33.85■■■■□ 3.01
CASKIN2-203ENST00000580021 AQRO60306 1485 aaKnown RBP eCLIP33.81■■■■□ 3
CASKIN2-203ENST00000580021 POLA1P09884 1462 aaPredicted RBP33.8■■■■□ 3
CASKIN2-203ENST00000580021 RIMBP3CA6NJZ7 1639 aa33.73■■■□□ 2.99
CASKIN2-203ENST00000580021 RIMBP3BA6NNM3 1639 aa33.73■■■□□ 2.99
CASKIN2-203ENST00000580021 RIMBP3Q9UFD9 1639 aa33.73■■■□□ 2.99
CASKIN2-203ENST00000580021 RAD54L2Q9Y4B4 1467 aa33.73■■■□□ 2.99
CASKIN2-203ENST00000580021 CHD1O14646 1710 aa33.7■■■□□ 2.99
CASKIN2-203ENST00000580021 SUPT5HO00267 1087 aaKnown RBP33.66■■■□□ 2.98
CASKIN2-203ENST00000580021 SOGA1O94964 1423 aa33.66■■■□□ 2.98
CASKIN2-203ENST00000580021 FGD5Q6ZNL6 1462 aa33.63■■■□□ 2.97
CASKIN2-203ENST00000580021 TDRD9Q8NDG6 1382 aaKnown RBP33.61■■■□□ 2.97
CASKIN2-203ENST00000580021 CUX1P39880 1505 aa33.61■■■□□ 2.97
CASKIN2-203ENST00000580021 FBLN2P98095 1184 aa33.6■■■□□ 2.97
CASKIN2-203ENST00000580021 ARHGEF11O15085 1522 aa33.59■■■□□ 2.97
CASKIN2-203ENST00000580021 SNAPC4Q5SXM2 1469 aa33.44■■■□□ 2.94
CASKIN2-203ENST00000580021 WDR97A6NE52 1622 aa33.42■■■□□ 2.94
CASKIN2-203ENST00000580021 CYB5RLQ6IPT4 315 aa33.4■■■□□ 2.94
CASKIN2-203ENST00000580021 GRIN2BQ13224 1484 aa33.32■■■□□ 2.92
CASKIN2-203ENST00000580021 CHMP7Q8WUX9 453 aaPredicted RBP33.32■■■□□ 2.92
CASKIN2-203ENST00000580021 MAGI1Q96QZ7 1491 aaPredicted RBP33.31■■■□□ 2.92
CASKIN2-203ENST00000580021 PBRM1Q86U86 1689 aa33.29■■■□□ 2.92
CASKIN2-203ENST00000580021 ARAP1Q96P48 1450 aa33.27■■■□□ 2.92
CASKIN2-203ENST00000580021 GAPVD1Q14C86 1478 aa33.25■■■□□ 2.91
CASKIN2-203ENST00000580021 CLASP1Q7Z460 1538 aa33.23■■■□□ 2.91
CASKIN2-203ENST00000580021 SYNJ1O43426 1573 aa33.21■■■□□ 2.91
CASKIN2-203ENST00000580021 SYNJ2O15056 1496 aa33.21■■■□□ 2.91
CASKIN2-203ENST00000580021 ABCA10Q8WWZ4 1543 aa33.2■■■□□ 2.91
CASKIN2-203ENST00000580021 ABCA5Q8WWZ7 1642 aa33.17■■■□□ 2.9
CASKIN2-203ENST00000580021 BIVM-ERCC5R4GMW8 1640 aa33.09■■■□□ 2.89
CASKIN2-203ENST00000580021 WRNQ14191 1432 aaPredicted RBP eCLIP33.08■■■□□ 2.89
CASKIN2-203ENST00000580021 TOP2BQ02880 1626 aa33.07■■■□□ 2.88
CASKIN2-203ENST00000580021 TRHP20396 242 aaPredicted RBP33.01■■■□□ 2.87
CASKIN2-203ENST00000580021 GRIN2AQ12879 1464 aa32.92■■■□□ 2.86
CASKIN2-203ENST00000580021 ADAMTS12P58397 1594 aa32.92■■■□□ 2.86
CASKIN2-203ENST00000580021 CEP170Q5SW79 1584 aa32.83■■■□□ 2.85
CASKIN2-203ENST00000580021 FHAD1B1AJZ9 1412 aa32.8■■■□□ 2.84
CASKIN2-203ENST00000580021 ERCC6L2Q5T890 1561 aa32.79■■■□□ 2.84
CASKIN2-203ENST00000580021 NUP160Q12769 1436 aa32.78■■■□□ 2.84
CASKIN2-203ENST00000580021 ERICH3Q5RHP9 1530 aa32.78■■■□□ 2.84
CASKIN2-203ENST00000580021 SHROOM2Q13796 1616 aa32.66■■■□□ 2.82
CASKIN2-203ENST00000580021 PRG4Q92954 1404 aaPredicted RBP32.51■■■□□ 2.79
CASKIN2-203ENST00000580021 JPH4Q96JJ6 628 aa32.49■■■□□ 2.79
CASKIN2-203ENST00000580021 RUSC2Q8N2Y8 1516 aa32.44■■■□□ 2.78
CASKIN2-203ENST00000580021 IGF1RP08069 1367 aa32.42■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 413.3 ms