RNA–Protein interactions for RNA: ENST00000579973.5

KCTD1-206, Transcript of potassium channel tetramerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD1, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD1-206ENST00000579973 NISCHQ9Y2I1 1504 aa24.98■■□□□ 1.59
KCTD1-206ENST00000579973 AEBP2Q6ZN18 517 aaPredicted RBP23.3■■□□□ 1.32
KCTD1-206ENST00000579973 ABCC9O60706 1549 aa22.9■■□□□ 1.26
KCTD1-206ENST00000579973 CHIC1Q5VXU3 224 aa22.83■■□□□ 1.25
KCTD1-206ENST00000579973 CCDC180Q9P1Z9 1646 aa22.21■■□□□ 1.15
KCTD1-206ENST00000579973 DNAJC5BQ9UF47 199 aa21.99■■□□□ 1.11
KCTD1-206ENST00000579973 RB1CC1Q8TDY2 1594 aa21.49■■□□□ 1.03
KCTD1-206ENST00000579973 PABPN1Q86U42 306 aaKnown RBP eCLIP21.24■□□□□ 0.99
KCTD1-206ENST00000579973 NACADO15069 1562 aa21.19■□□□□ 0.98
KCTD1-206ENST00000579973 DCAF8L2P0C7V8 631 aa21.07■□□□□ 0.96
KCTD1-206ENST00000579973 ZCCHC6Q5VYS8 1495 aaKnown RBP20.92■□□□□ 0.94
KCTD1-206ENST00000579973 UNC13AQ9UPW8 1703 aa20.85■□□□□ 0.93
KCTD1-206ENST00000579973 BICRAQ9NZM4 1560 aa20.83■□□□□ 0.93
KCTD1-206ENST00000579973 CECR2Q9BXF3 1484 aa20.69■□□□□ 0.9
KCTD1-206ENST00000579973 DNAJC5Q9H3Z4 198 aa20.68■□□□□ 0.9
KCTD1-206ENST00000579973 MYO15BQ96JP2 1530 aa20.68■□□□□ 0.9
KCTD1-206ENST00000579973 CC2D2AQ9P2K1 1620 aa20.59■□□□□ 0.89
KCTD1-206ENST00000579973 SHROOM4Q9ULL8 1493 aa20.55■□□□□ 0.88
KCTD1-206ENST00000579973 DCAF1Q9Y4B6 1507 aa20.54■□□□□ 0.88
KCTD1-206ENST00000579973 EIF4G1Q04637 1599 aaKnown RBP20.41■□□□□ 0.86
KCTD1-206ENST00000579973 SCRIBQ14160 1630 aa20.25■□□□□ 0.83
KCTD1-206ENST00000579973 PHF23Q9BUL5 403 aaPredicted RBP20.19■□□□□ 0.82
KCTD1-206ENST00000579973 CUX2O14529 1486 aa19.98■□□□□ 0.79
KCTD1-206ENST00000579973 ERCC6Q03468 1493 aa19.84■□□□□ 0.77
KCTD1-206ENST00000579973 SENP3Q9H4L4 574 aaPredicted RBP19.79■□□□□ 0.76
KCTD1-206ENST00000579973 NCAPD3P42695 1498 aa19.58■□□□□ 0.73
KCTD1-206ENST00000579973 TRIM41Q8WV44 630 aa19.58■□□□□ 0.72
KCTD1-206ENST00000579973 SUPT5HO00267 1087 aaKnown RBP19.54■□□□□ 0.72
KCTD1-206ENST00000579973 NESP48681 1621 aa19.46■□□□□ 0.71
KCTD1-206ENST00000579973 ATAD2BQ9ULI0 1458 aa19.44■□□□□ 0.7
KCTD1-206ENST00000579973 RSF1Q96T23 1441 aaPredicted RBP19.36■□□□□ 0.69
KCTD1-206ENST00000579973 HMGXB3Q12766 1538 aa19.36■□□□□ 0.69
KCTD1-206ENST00000579973 MROH2BQ7Z745 1585 aa19.36■□□□□ 0.69
KCTD1-206ENST00000579973 SMARCA2P51531 1590 aa19.35■□□□□ 0.69
KCTD1-206ENST00000579973 THOC2Q8NI27 1593 aaKnown RBP19.34■□□□□ 0.69
KCTD1-206ENST00000579973 BAZ1AQ9NRL2 1556 aaPredicted RBP19.24■□□□□ 0.67
KCTD1-206ENST00000579973 BAZ1BQ9UIG0 1483 aaKnown RBP19.24■□□□□ 0.67
KCTD1-206ENST00000579973 SMARCA4P51532 1647 aa19.22■□□□□ 0.67
KCTD1-206ENST00000579973 LAMC3Q9Y6N6 1575 aa19.21■□□□□ 0.67
KCTD1-206ENST00000579973 PDS5BQ9NTI5 1447 aa19.19■□□□□ 0.66
KCTD1-206ENST00000579973 WIZO95785 1651 aa19.17■□□□□ 0.66
KCTD1-206ENST00000579973 KIF21AQ7Z4S6 1674 aa19.12■□□□□ 0.65
KCTD1-206ENST00000579973 MRC2Q9UBG0 1479 aa19.05■□□□□ 0.64
KCTD1-206ENST00000579973 PEG3Q9GZU2 1588 aa19.03■□□□□ 0.64
KCTD1-206ENST00000579973 OSCARQ8IYS5 282 aa19■□□□□ 0.63
KCTD1-206ENST00000579973 CADPSQ9ULU8 1353 aa18.98■□□□□ 0.63
KCTD1-206ENST00000579973 WDR62O43379 1518 aa18.98■□□□□ 0.63
KCTD1-206ENST00000579973 TOP2AP11388 1531 aaKnown RBP18.88■□□□□ 0.61
KCTD1-206ENST00000579973 CEP164Q9UPV0 1460 aa18.85■□□□□ 0.61
KCTD1-206ENST00000579973 CCDC88BA6NC98 1476 aa18.78■□□□□ 0.6
KCTD1-206ENST00000579973 FANCD2Q9BXW9 1451 aa18.76■□□□□ 0.59
KCTD1-206ENST00000579973 RIMBP3CA6NJZ7 1639 aa18.74■□□□□ 0.59
KCTD1-206ENST00000579973 RIMBP3BA6NNM3 1639 aa18.74■□□□□ 0.59
KCTD1-206ENST00000579973 RIMBP3Q9UFD9 1639 aa18.74■□□□□ 0.59
KCTD1-206ENST00000579973 ARHGEF11O15085 1522 aa18.65■□□□□ 0.58
KCTD1-206ENST00000579973 PLPPR3Q6T4P5 718 aa18.65■□□□□ 0.58
KCTD1-206ENST00000579973 TRHP20396 242 aaPredicted RBP18.63■□□□□ 0.57
KCTD1-206ENST00000579973 URB2Q14146 1524 aaKnown RBP18.62■□□□□ 0.57
KCTD1-206ENST00000579973 CFTRP13569 1480 aa18.61■□□□□ 0.57
KCTD1-206ENST00000579973 CYB5RLQ6IPT4 315 aa18.61■□□□□ 0.57
KCTD1-206ENST00000579973 ZNF608Q9ULD9 1512 aaPredicted RBP18.5■□□□□ 0.55
KCTD1-206ENST00000579973 IFT140Q96RY7 1462 aa18.5■□□□□ 0.55
KCTD1-206ENST00000579973 FOXD1Q16676 465 aa18.46■□□□□ 0.55
KCTD1-206ENST00000579973 ARAP1Q96P48 1450 aa18.43■□□□□ 0.54
KCTD1-206ENST00000579973 ABCC8Q09428 1581 aa18.36■□□□□ 0.53
KCTD1-206ENST00000579973 FBLN2P98095 1184 aa18.35■□□□□ 0.53
KCTD1-206ENST00000579973 EIF4G3O43432 1585 aaKnown RBP18.34■□□□□ 0.53
KCTD1-206ENST00000579973 TOPBP1Q92547 1522 aa18.32■□□□□ 0.52
KCTD1-206ENST00000579973 CHD1O14646 1710 aa18.27■□□□□ 0.52
KCTD1-206ENST00000579973 AQRO60306 1485 aaKnown RBP eCLIP18.27■□□□□ 0.51
KCTD1-206ENST00000579973 PRDM2Q13029 1718 aa18.25■□□□□ 0.51
KCTD1-206ENST00000579973 DNMBPQ6XZF7 1577 aa18.19■□□□□ 0.5
KCTD1-206ENST00000579973 WRNQ14191 1432 aaPredicted RBP eCLIP18.19■□□□□ 0.5
KCTD1-206ENST00000579973 TARBP1Q13395 1621 aaKnown RBP18.16■□□□□ 0.5
KCTD1-206ENST00000579973 SYNJ1O43426 1573 aa18.15■□□□□ 0.5
KCTD1-206ENST00000579973 CHMP7Q8WUX9 453 aaPredicted RBP18.1■□□□□ 0.49
KCTD1-206ENST00000579973 CLASP1Q7Z460 1538 aa18.1■□□□□ 0.49
KCTD1-206ENST00000579973 POLA1P09884 1462 aaPredicted RBP18.09■□□□□ 0.49
KCTD1-206ENST00000579973 CUX1P39880 1505 aa18.09■□□□□ 0.49
KCTD1-206ENST00000579973 TDRD9Q8NDG6 1382 aaKnown RBP18.09■□□□□ 0.49
KCTD1-206ENST00000579973 FAM9AQ8IZU1 332 aaPredicted RBP18.09■□□□□ 0.49
KCTD1-206ENST00000579973 SNAPC4Q5SXM2 1469 aa18.07■□□□□ 0.48
KCTD1-206ENST00000579973 RAD54L2Q9Y4B4 1467 aa18.05■□□□□ 0.48
KCTD1-206ENST00000579973 SOGA1O94964 1423 aa18.03■□□□□ 0.48
KCTD1-206ENST00000579973 TOP2BQ02880 1626 aa18.02■□□□□ 0.48
KCTD1-206ENST00000579973 GAPVD1Q14C86 1478 aa18■□□□□ 0.47
KCTD1-206ENST00000579973 MAGI1Q96QZ7 1491 aaPredicted RBP17.99■□□□□ 0.47
KCTD1-206ENST00000579973 RUSC2Q8N2Y8 1516 aa17.98■□□□□ 0.47
KCTD1-206ENST00000579973 BIVM-ERCC5R4GMW8 1640 aa17.97■□□□□ 0.47
KCTD1-206ENST00000579973 LOC105371045A0A1W2PR82 267 aa17.96■□□□□ 0.47
KCTD1-206ENST00000579973 WDR97A6NE52 1622 aa17.95■□□□□ 0.46
KCTD1-206ENST00000579973 SYNJ2O15056 1496 aa17.95■□□□□ 0.46
KCTD1-206ENST00000579973 GRIN2BQ13224 1484 aa17.95■□□□□ 0.46
KCTD1-206ENST00000579973 EHMT2Q96KQ7 1210 aa17.92■□□□□ 0.46
KCTD1-206ENST00000579973 FGD5Q6ZNL6 1462 aa17.91■□□□□ 0.46
KCTD1-206ENST00000579973 CSRNP3Q8WYN3 585 aa17.8■□□□□ 0.44
KCTD1-206ENST00000579973 MYT1Q01538 1121 aa17.78■□□□□ 0.44
KCTD1-206ENST00000579973 ILDR1Q86SU0 546 aaPredicted RBP17.78■□□□□ 0.44
KCTD1-206ENST00000579973 ERCC6L2Q5T890 1561 aa17.76■□□□□ 0.43
KCTD1-206ENST00000579973 PBRM1Q86U86 1689 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 5.9 ms