RNA–Protein interactions for RNA: ENST00000579762.1

TMEM199-206, Transcript of transmembrane protein 199, humanhuman

TSL 5

Gene TMEM199, Length 385 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM199-206ENST00000579762 NISCHQ9Y2I1 1504 aa52.59■■■■■ 6.01
TMEM199-206ENST00000579762 CCDC180Q9P1Z9 1646 aa46.79■■■■■ 5.08
TMEM199-206ENST00000579762 ABCC9O60706 1549 aa45.61■■■■■ 4.89
TMEM199-206ENST00000579762 RB1CC1Q8TDY2 1594 aa44■■■■■ 4.63
TMEM199-206ENST00000579762 NACADO15069 1562 aa43.95■■■■■ 4.63
TMEM199-206ENST00000579762 DCAF8L2P0C7V8 631 aa43.88■■■■■ 4.62
TMEM199-206ENST00000579762 ZCCHC6Q5VYS8 1495 aaKnown RBP43.83■■■■■ 4.61
TMEM199-206ENST00000579762 MYO15BQ96JP2 1530 aa43.72■■■■■ 4.59
TMEM199-206ENST00000579762 DCAF1Q9Y4B6 1507 aa43.56■■■■■ 4.56
TMEM199-206ENST00000579762 UNC13AQ9UPW8 1703 aa42.95■■■■■ 4.47
TMEM199-206ENST00000579762 SCRIBQ14160 1630 aa42.64■■■■■ 4.42
TMEM199-206ENST00000579762 PABPN1Q86U42 306 aaKnown RBP eCLIP42.58■■■■■ 4.41
TMEM199-206ENST00000579762 BICRAQ9NZM4 1560 aa42.56■■■■■ 4.4
TMEM199-206ENST00000579762 SHROOM4Q9ULL8 1493 aa42.26■■■■■ 4.36
TMEM199-206ENST00000579762 DNAJC5BQ9UF47 199 aa41.65■■■■■ 4.26
TMEM199-206ENST00000579762 EIF4G1Q04637 1599 aaKnown RBP41.48■■■■■ 4.23
TMEM199-206ENST00000579762 CC2D2AQ9P2K1 1620 aa41.28■■■■■ 4.2
TMEM199-206ENST00000579762 CECR2Q9BXF3 1484 aa40.99■■■■■ 4.15
TMEM199-206ENST00000579762 BAZ1AQ9NRL2 1556 aaPredicted RBP40.81■■■■■ 4.12
TMEM199-206ENST00000579762 SMARCA4P51532 1647 aa40.81■■■■■ 4.12
TMEM199-206ENST00000579762 SMARCA2P51531 1590 aa40.57■■■■■ 4.08
TMEM199-206ENST00000579762 ATAD2BQ9ULI0 1458 aa40.53■■■■■ 4.08
TMEM199-206ENST00000579762 NCAPD3P42695 1498 aa40.51■■■■■ 4.07
TMEM199-206ENST00000579762 MROH2BQ7Z745 1585 aa40.5■■■■■ 4.07
TMEM199-206ENST00000579762 PEG3Q9GZU2 1588 aa40.4■■■■■ 4.06
TMEM199-206ENST00000579762 HMGXB3Q12766 1538 aa40.37■■■■■ 4.05
TMEM199-206ENST00000579762 BAZ1BQ9UIG0 1483 aaKnown RBP40.26■■■■■ 4.03
TMEM199-206ENST00000579762 WIZO95785 1651 aa40.08■■■■■ 4.01
TMEM199-206ENST00000579762 RSF1Q96T23 1441 aaPredicted RBP40.07■■■■■ 4
TMEM199-206ENST00000579762 TOP2AP11388 1531 aaKnown RBP39.7■■■■□ 3.95
TMEM199-206ENST00000579762 LAMC3Q9Y6N6 1575 aa39.49■■■■□ 3.91
TMEM199-206ENST00000579762 NESP48681 1621 aa39.47■■■■□ 3.91
TMEM199-206ENST00000579762 ERCC6Q03468 1493 aa39.38■■■■□ 3.9
TMEM199-206ENST00000579762 CADPSQ9ULU8 1353 aa39.33■■■■□ 3.89
TMEM199-206ENST00000579762 PDS5BQ9NTI5 1447 aa39.21■■■■□ 3.87
TMEM199-206ENST00000579762 CCDC88BA6NC98 1476 aa39.18■■■■□ 3.86
TMEM199-206ENST00000579762 SUPT5HO00267 1087 aaKnown RBP39.12■■■■□ 3.85
TMEM199-206ENST00000579762 CFTRP13569 1480 aa39.11■■■■□ 3.85
TMEM199-206ENST00000579762 KIF21AQ7Z4S6 1674 aa39.06■■■■□ 3.84
TMEM199-206ENST00000579762 CUX2O14529 1486 aa38.93■■■■□ 3.82
TMEM199-206ENST00000579762 PRDM2Q13029 1718 aa38.92■■■■□ 3.82
TMEM199-206ENST00000579762 THOC2Q8NI27 1593 aaKnown RBP38.91■■■■□ 3.82
TMEM199-206ENST00000579762 FANCD2Q9BXW9 1451 aa38.9■■■■□ 3.82
TMEM199-206ENST00000579762 CEP164Q9UPV0 1460 aa38.87■■■■□ 3.81
TMEM199-206ENST00000579762 MRC2Q9UBG0 1479 aa38.79■■■■□ 3.8
TMEM199-206ENST00000579762 WDR62O43379 1518 aa38.63■■■■□ 3.78
TMEM199-206ENST00000579762 URB2Q14146 1524 aaKnown RBP38.47■■■■□ 3.75
TMEM199-206ENST00000579762 ABCC8Q09428 1581 aa38.36■■■■□ 3.73
TMEM199-206ENST00000579762 TOPBP1Q92547 1522 aa38.28■■■■□ 3.72
TMEM199-206ENST00000579762 DNMBPQ6XZF7 1577 aa38.27■■■■□ 3.72
TMEM199-206ENST00000579762 IFT140Q96RY7 1462 aa38.04■■■■□ 3.68
TMEM199-206ENST00000579762 CUX1P39880 1505 aa38■■■■□ 3.67
TMEM199-206ENST00000579762 POLA1P09884 1462 aaPredicted RBP37.95■■■■□ 3.67
TMEM199-206ENST00000579762 FGD5Q6ZNL6 1462 aa37.88■■■■□ 3.65
TMEM199-206ENST00000579762 TARBP1Q13395 1621 aaKnown RBP37.85■■■■□ 3.65
TMEM199-206ENST00000579762 WRNQ14191 1432 aaPredicted RBP eCLIP37.83■■■■□ 3.65
TMEM199-206ENST00000579762 SOGA1O94964 1423 aa37.8■■■■□ 3.64
TMEM199-206ENST00000579762 ZNF608Q9ULD9 1512 aaPredicted RBP37.79■■■■□ 3.64
TMEM199-206ENST00000579762 RAD54L2Q9Y4B4 1467 aa37.75■■■■□ 3.63
TMEM199-206ENST00000579762 TOP2BQ02880 1626 aa37.75■■■■□ 3.63
TMEM199-206ENST00000579762 BIVM-ERCC5R4GMW8 1640 aa37.75■■■■□ 3.63
TMEM199-206ENST00000579762 EIF4G3O43432 1585 aaKnown RBP37.72■■■■□ 3.63
TMEM199-206ENST00000579762 SYNJ1O43426 1573 aa37.69■■■■□ 3.62
TMEM199-206ENST00000579762 WDR97A6NE52 1622 aa37.65■■■■□ 3.62
TMEM199-206ENST00000579762 AQRO60306 1485 aaKnown RBP eCLIP37.59■■■■□ 3.618e-6■■■■□ 23.2
TMEM199-206ENST00000579762 DNAJC5Q9H3Z4 198 aa37.55■■■■□ 3.6
TMEM199-206ENST00000579762 TDRD9Q8NDG6 1382 aaKnown RBP37.55■■■■□ 3.6
TMEM199-206ENST00000579762 ABCA10Q8WWZ4 1543 aa37.53■■■■□ 3.6
TMEM199-206ENST00000579762 GRIN2BQ13224 1484 aa37.39■■■■□ 3.58
TMEM199-206ENST00000579762 GAPVD1Q14C86 1478 aa37.39■■■■□ 3.58
TMEM199-206ENST00000579762 ABCA5Q8WWZ7 1642 aa37.37■■■■□ 3.57
TMEM199-206ENST00000579762 PBRM1Q86U86 1689 aa37.34■■■■□ 3.57
TMEM199-206ENST00000579762 OSCARQ8IYS5 282 aa37.3■■■■□ 3.56
TMEM199-206ENST00000579762 SNAPC4Q5SXM2 1469 aa37.3■■■■□ 3.56
TMEM199-206ENST00000579762 MAGI1Q96QZ7 1491 aaPredicted RBP37.29■■■■□ 3.56
TMEM199-206ENST00000579762 CHD1O14646 1710 aa37.23■■■■□ 3.55
TMEM199-206ENST00000579762 FBLN2P98095 1184 aa37.17■■■■□ 3.54
TMEM199-206ENST00000579762 SYNJ2O15056 1496 aa37.13■■■■□ 3.53
TMEM199-206ENST00000579762 ERICH3Q5RHP9 1530 aa37.11■■■■□ 3.53
TMEM199-206ENST00000579762 CHMP7Q8WUX9 453 aaPredicted RBP37.1■■■■□ 3.53
TMEM199-206ENST00000579762 KIF27Q86VH2 1401 aa37.05■■■■□ 3.52
TMEM199-206ENST00000579762 ADAMTS12P58397 1594 aa37.02■■■■□ 3.52
TMEM199-206ENST00000579762 TRIM41Q8WV44 630 aa36.98■■■■□ 3.51
TMEM199-206ENST00000579762 FHAD1B1AJZ9 1412 aa36.97■■■■□ 3.51
TMEM199-206ENST00000579762 GRIN2AQ12879 1464 aa36.88■■■■□ 3.5
TMEM199-206ENST00000579762 CUL7Q14999 1698 aa36.83■■■■□ 3.49
TMEM199-206ENST00000579762 IGF1RP08069 1367 aa36.81■■■■□ 3.48
TMEM199-206ENST00000579762 CLASP1Q7Z460 1538 aa36.8■■■■□ 3.48
TMEM199-206ENST00000579762 NUP160Q12769 1436 aa36.7■■■■□ 3.47
TMEM199-206ENST00000579762 RIMBP3CA6NJZ7 1639 aa36.69■■■■□ 3.46
TMEM199-206ENST00000579762 RIMBP3BA6NNM3 1639 aa36.69■■■■□ 3.46
TMEM199-206ENST00000579762 RIMBP3Q9UFD9 1639 aa36.69■■■■□ 3.46
TMEM199-206ENST00000579762 ARHGEF11O15085 1522 aa36.69■■■■□ 3.46
TMEM199-206ENST00000579762 CEP170Q5SW79 1584 aa36.68■■■■□ 3.46
TMEM199-206ENST00000579762 CARMIL1Q5VZK9 1371 aa36.64■■■■□ 3.46
TMEM199-206ENST00000579762 RUSC2Q8N2Y8 1516 aa36.62■■■■□ 3.45
TMEM199-206ENST00000579762 CHIC1Q5VXU3 224 aa36.53■■■■□ 3.44
TMEM199-206ENST00000579762 RAPGEF2Q9Y4G8 1499 aa36.46■■■■□ 3.43
TMEM199-206ENST00000579762 EEA1Q15075 1411 aa36.44■■■■□ 3.42
TMEM199-206ENST00000579762 SHROOM2Q13796 1616 aa36.43■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms