RNA–Protein interactions for RNA: ENST00000579688.1

SPECC1-213, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 4

Gene SPECC1, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-213ENST00000579688 NISCHQ9Y2I1 1504 aa49.12■■■■■ 5.45
SPECC1-213ENST00000579688 CCDC180Q9P1Z9 1646 aa44.17■■■■■ 4.66
SPECC1-213ENST00000579688 ABCC9O60706 1549 aa44.13■■■■■ 4.65
SPECC1-213ENST00000579688 RB1CC1Q8TDY2 1594 aa42.02■■■■■ 4.32
SPECC1-213ENST00000579688 NACADO15069 1562 aa41.71■■■■■ 4.27
SPECC1-213ENST00000579688 DNAJC5BQ9UF47 199 aa41.39■■■■■ 4.22
SPECC1-213ENST00000579688 DCAF8L2P0C7V8 631 aa41.36■■■■■ 4.21
SPECC1-213ENST00000579688 UNC13AQ9UPW8 1703 aa41.17■■■■■ 4.18
SPECC1-213ENST00000579688 MYO15BQ96JP2 1530 aa41.13■■■■■ 4.17
SPECC1-213ENST00000579688 PABPN1Q86U42 306 aaKnown RBP eCLIP41.02■■■■■ 4.16
SPECC1-213ENST00000579688 BICRAQ9NZM4 1560 aa40.82■■■■■ 4.12
SPECC1-213ENST00000579688 ZCCHC6Q5VYS8 1495 aaKnown RBP40.71■■■■■ 4.11
SPECC1-213ENST00000579688 DCAF1Q9Y4B6 1507 aa40.58■■■■■ 4.09
SPECC1-213ENST00000579688 SHROOM4Q9ULL8 1493 aa40.26■■■■■ 4.03
SPECC1-213ENST00000579688 SCRIBQ14160 1630 aa40.2■■■■■ 4.03
SPECC1-213ENST00000579688 CC2D2AQ9P2K1 1620 aa39.91■■■■□ 3.98
SPECC1-213ENST00000579688 EIF4G1Q04637 1599 aaKnown RBP39.8■■■■□ 3.96
SPECC1-213ENST00000579688 CECR2Q9BXF3 1484 aa39.75■■■■□ 3.95
SPECC1-213ENST00000579688 NCAPD3P42695 1498 aa38.47■■■■□ 3.75
SPECC1-213ENST00000579688 ATAD2BQ9ULI0 1458 aa38.36■■■■□ 3.73
SPECC1-213ENST00000579688 SMARCA4P51532 1647 aa38.36■■■■□ 3.73
SPECC1-213ENST00000579688 SMARCA2P51531 1590 aa38.28■■■■□ 3.72
SPECC1-213ENST00000579688 HMGXB3Q12766 1538 aa38.23■■■■□ 3.71
SPECC1-213ENST00000579688 BAZ1AQ9NRL2 1556 aaPredicted RBP38.14■■■■□ 3.7
SPECC1-213ENST00000579688 ERCC6Q03468 1493 aa38.1■■■■□ 3.69
SPECC1-213ENST00000579688 CUX2O14529 1486 aa38.07■■■■□ 3.68
SPECC1-213ENST00000579688 DNAJC5Q9H3Z4 198 aa38.04■■■■□ 3.68
SPECC1-213ENST00000579688 PEG3Q9GZU2 1588 aa37.99■■■■□ 3.67
SPECC1-213ENST00000579688 BAZ1BQ9UIG0 1483 aaKnown RBP37.99■■■■□ 3.67
SPECC1-213ENST00000579688 NESP48681 1621 aa37.9■■■■□ 3.66
SPECC1-213ENST00000579688 MROH2BQ7Z745 1585 aa37.85■■■■□ 3.65
SPECC1-213ENST00000579688 LAMC3Q9Y6N6 1575 aa37.67■■■■□ 3.62
SPECC1-213ENST00000579688 THOC2Q8NI27 1593 aaKnown RBP37.59■■■■□ 3.61
SPECC1-213ENST00000579688 KIF21AQ7Z4S6 1674 aa37.5■■■■□ 3.59
SPECC1-213ENST00000579688 WIZO95785 1651 aa37.42■■■■□ 3.58
SPECC1-213ENST00000579688 PDS5BQ9NTI5 1447 aa37.39■■■■□ 3.58
SPECC1-213ENST00000579688 CADPSQ9ULU8 1353 aa37.29■■■■□ 3.56
SPECC1-213ENST00000579688 MRC2Q9UBG0 1479 aa37.1■■■■□ 3.53
SPECC1-213ENST00000579688 WDR62O43379 1518 aa37.04■■■■□ 3.52
SPECC1-213ENST00000579688 RSF1Q96T23 1441 aaPredicted RBP37.02■■■■□ 3.52
SPECC1-213ENST00000579688 CEP164Q9UPV0 1460 aa36.95■■■■□ 3.51
SPECC1-213ENST00000579688 TOP2AP11388 1531 aaKnown RBP36.94■■■■□ 3.5
SPECC1-213ENST00000579688 FANCD2Q9BXW9 1451 aa36.89■■■■□ 3.5
SPECC1-213ENST00000579688 CFTRP13569 1480 aa36.88■■■■□ 3.5
SPECC1-213ENST00000579688 PRDM2Q13029 1718 aa36.65■■■■□ 3.46
SPECC1-213ENST00000579688 URB2Q14146 1524 aaKnown RBP36.61■■■■□ 3.45
SPECC1-213ENST00000579688 CCDC88BA6NC98 1476 aa36.48■■■■□ 3.43
SPECC1-213ENST00000579688 TRIM41Q8WV44 630 aa36.34■■■■□ 3.41
SPECC1-213ENST00000579688 OSCARQ8IYS5 282 aa36.25■■■■□ 3.39
SPECC1-213ENST00000579688 TOPBP1Q92547 1522 aa36.2■■■■□ 3.39
SPECC1-213ENST00000579688 IFT140Q96RY7 1462 aa36.2■■■■□ 3.39
SPECC1-213ENST00000579688 ZNF608Q9ULD9 1512 aaPredicted RBP36.15■■■■□ 3.38
SPECC1-213ENST00000579688 ABCC8Q09428 1581 aa36.1■■■■□ 3.37
SPECC1-213ENST00000579688 DNMBPQ6XZF7 1577 aa36.08■■■■□ 3.37
SPECC1-213ENST00000579688 EIF4G3O43432 1585 aaKnown RBP36.01■■■■□ 3.35
SPECC1-213ENST00000579688 TARBP1Q13395 1621 aaKnown RBP35.93■■■■□ 3.34
SPECC1-213ENST00000579688 RIMBP3CA6NJZ7 1639 aa35.9■■■■□ 3.34
SPECC1-213ENST00000579688 RIMBP3BA6NNM3 1639 aa35.9■■■■□ 3.34
SPECC1-213ENST00000579688 RIMBP3Q9UFD9 1639 aa35.9■■■■□ 3.34
SPECC1-213ENST00000579688 POLA1P09884 1462 aaPredicted RBP35.83■■■■□ 3.33
SPECC1-213ENST00000579688 AQRO60306 1485 aaKnown RBP eCLIP35.8■■■■□ 3.32
SPECC1-213ENST00000579688 CHD1O14646 1710 aa35.78■■■■□ 3.32
SPECC1-213ENST00000579688 ARHGEF11O15085 1522 aa35.75■■■■□ 3.31
SPECC1-213ENST00000579688 RAD54L2Q9Y4B4 1467 aa35.67■■■■□ 3.3
SPECC1-213ENST00000579688 SOGA1O94964 1423 aa35.63■■■■□ 3.29
SPECC1-213ENST00000579688 FGD5Q6ZNL6 1462 aa35.6■■■■□ 3.29
SPECC1-213ENST00000579688 WDR97A6NE52 1622 aa35.57■■■■□ 3.28
SPECC1-213ENST00000579688 CUX1P39880 1505 aa35.57■■■■□ 3.28
SPECC1-213ENST00000579688 TDRD9Q8NDG6 1382 aaKnown RBP35.55■■■■□ 3.28
SPECC1-213ENST00000579688 FBLN2P98095 1184 aa35.52■■■■□ 3.28
SPECC1-213ENST00000579688 SNAPC4Q5SXM2 1469 aa35.46■■■■□ 3.27
SPECC1-213ENST00000579688 CYB5RLQ6IPT4 315 aa35.41■■■■□ 3.26
SPECC1-213ENST00000579688 ARAP1Q96P48 1450 aa35.39■■■■□ 3.26
SPECC1-213ENST00000579688 MAGI1Q96QZ7 1491 aaPredicted RBP35.37■■■■□ 3.25
SPECC1-213ENST00000579688 GRIN2BQ13224 1484 aa35.35■■■■□ 3.25
SPECC1-213ENST00000579688 CLASP1Q7Z460 1538 aa35.32■■■■□ 3.24
SPECC1-213ENST00000579688 PBRM1Q86U86 1689 aa35.3■■■■□ 3.24
SPECC1-213ENST00000579688 SYNJ1O43426 1573 aa35.29■■■■□ 3.24
SPECC1-213ENST00000579688 SUPT5HO00267 1087 aaKnown RBP35.28■■■■□ 3.24
SPECC1-213ENST00000579688 CHMP7Q8WUX9 453 aaPredicted RBP35.26■■■■□ 3.24
SPECC1-213ENST00000579688 SYNJ2O15056 1496 aa35.24■■■■□ 3.23
SPECC1-213ENST00000579688 GAPVD1Q14C86 1478 aa35.22■■■■□ 3.23
SPECC1-213ENST00000579688 ABCA5Q8WWZ7 1642 aa35.2■■■■□ 3.23
SPECC1-213ENST00000579688 ABCA10Q8WWZ4 1543 aa35.19■■■■□ 3.22
SPECC1-213ENST00000579688 BIVM-ERCC5R4GMW8 1640 aa35.04■■■■□ 3.2
SPECC1-213ENST00000579688 TRHP20396 242 aaPredicted RBP35.02■■■■□ 3.2
SPECC1-213ENST00000579688 WRNQ14191 1432 aaPredicted RBP eCLIP35.01■■■■□ 3.2
SPECC1-213ENST00000579688 TOP2BQ02880 1626 aa35.01■■■■□ 3.19
SPECC1-213ENST00000579688 ADAMTS12P58397 1594 aa34.92■■■■□ 3.18
SPECC1-213ENST00000579688 GRIN2AQ12879 1464 aa34.91■■■■□ 3.18
SPECC1-213ENST00000579688 CEP170Q5SW79 1584 aa34.82■■■■□ 3.16
SPECC1-213ENST00000579688 NUP160Q12769 1436 aa34.79■■■■□ 3.16
SPECC1-213ENST00000579688 ERICH3Q5RHP9 1530 aa34.76■■■■□ 3.16
SPECC1-213ENST00000579688 ERCC6L2Q5T890 1561 aa34.76■■■■□ 3.16
SPECC1-213ENST00000579688 FHAD1B1AJZ9 1412 aa34.76■■■■□ 3.16
SPECC1-213ENST00000579688 SHROOM2Q13796 1616 aa34.69■■■■□ 3.14
SPECC1-213ENST00000579688 RUSC2Q8N2Y8 1516 aa34.45■■■■□ 3.1
SPECC1-213ENST00000579688 PRG4Q92954 1404 aaPredicted RBP34.43■■■■□ 3.1
SPECC1-213ENST00000579688 JPH4Q96JJ6 628 aa34.37■■■■□ 3.09
SPECC1-213ENST00000579688 CUL7Q14999 1698 aa34.28■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms