RNA–Protein interactions for RNA: ENST00000579591.1

CDKN2B-203, Transcript of cyclin dependent kinase inhibitor 2B, humanhuman

Gene CDKN2B, Length 1,069 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2B-203ENST00000579591 NISCHQ9Y2I1 1504 aa44.18■■■■■ 4.66
CDKN2B-203ENST00000579591 CCDC180Q9P1Z9 1646 aa39.65■■■■□ 3.94
CDKN2B-203ENST00000579591 ABCC9O60706 1549 aa39.28■■■■□ 3.88
CDKN2B-203ENST00000579591 RB1CC1Q8TDY2 1594 aa37.62■■■■□ 3.61
CDKN2B-203ENST00000579591 NACADO15069 1562 aa37.42■■■■□ 3.58
CDKN2B-203ENST00000579591 DCAF8L2P0C7V8 631 aa37.09■■■■□ 3.53
CDKN2B-203ENST00000579591 MYO15BQ96JP2 1530 aa37.03■■■■□ 3.52
CDKN2B-203ENST00000579591 DNAJC5BQ9UF47 199 aa37■■■■□ 3.51
CDKN2B-203ENST00000579591 UNC13AQ9UPW8 1703 aa36.67■■■■□ 3.46
CDKN2B-203ENST00000579591 ZCCHC6Q5VYS8 1495 aaKnown RBP36.67■■■■□ 3.46
CDKN2B-203ENST00000579591 PABPN1Q86U42 306 aaKnown RBP eCLIP36.64■■■■□ 3.46
CDKN2B-203ENST00000579591 DCAF1Q9Y4B6 1507 aa36.6■■■■□ 3.45
CDKN2B-203ENST00000579591 BICRAQ9NZM4 1560 aa36.4■■■■□ 3.42
CDKN2B-203ENST00000579591 SHROOM4Q9ULL8 1493 aa36.16■■■■□ 3.38
CDKN2B-203ENST00000579591 SCRIBQ14160 1630 aa36■■■■□ 3.35
CDKN2B-203ENST00000579591 EIF4G1Q04637 1599 aaKnown RBP35.54■■■■□ 3.28
CDKN2B-203ENST00000579591 CC2D2AQ9P2K1 1620 aa35.54■■■■□ 3.28
CDKN2B-203ENST00000579591 CECR2Q9BXF3 1484 aa35.41■■■■□ 3.26
CDKN2B-203ENST00000579591 NCAPD3P42695 1498 aa34.51■■■■□ 3.11
CDKN2B-203ENST00000579591 SMARCA4P51532 1647 aa34.42■■■■□ 3.1
CDKN2B-203ENST00000579591 SMARCA2P51531 1590 aa34.39■■■■□ 3.1
CDKN2B-203ENST00000579591 ATAD2BQ9ULI0 1458 aa34.39■■■■□ 3.1
CDKN2B-203ENST00000579591 BAZ1AQ9NRL2 1556 aaPredicted RBP34.33■■■■□ 3.09
CDKN2B-203ENST00000579591 HMGXB3Q12766 1538 aa34.3■■■■□ 3.08
CDKN2B-203ENST00000579591 PEG3Q9GZU2 1588 aa34.14■■■■□ 3.06
CDKN2B-203ENST00000579591 BAZ1BQ9UIG0 1483 aaKnown RBP34.1■■■■□ 3.05
CDKN2B-203ENST00000579591 ERCC6Q03468 1493 aa33.99■■■■□ 3.03
CDKN2B-203ENST00000579591 MROH2BQ7Z745 1585 aa33.98■■■■□ 3.03
CDKN2B-203ENST00000579591 DNAJC5Q9H3Z4 198 aa33.96■■■■□ 3.03
CDKN2B-203ENST00000579591 CUX2O14529 1486 aa33.91■■■■□ 3.02
CDKN2B-203ENST00000579591 NESP48681 1621 aa33.77■■■■□ 3
CDKN2B-203ENST00000579591 LAMC3Q9Y6N6 1575 aa33.73■■■□□ 2.99
CDKN2B-203ENST00000579591 WIZO95785 1651 aa33.58■■■□□ 2.97
CDKN2B-203ENST00000579591 PDS5BQ9NTI5 1447 aa33.53■■■□□ 2.96
CDKN2B-203ENST00000579591 THOC2Q8NI27 1593 aaKnown RBP33.47■■■□□ 2.95
CDKN2B-203ENST00000579591 CADPSQ9ULU8 1353 aa33.46■■■□□ 2.95
CDKN2B-203ENST00000579591 KIF21AQ7Z4S6 1674 aa33.4■■■□□ 2.94
CDKN2B-203ENST00000579591 RSF1Q96T23 1441 aaPredicted RBP33.37■■■□□ 2.93
CDKN2B-203ENST00000579591 TOP2AP11388 1531 aaKnown RBP33.26■■■□□ 2.91
CDKN2B-203ENST00000579591 MRC2Q9UBG0 1479 aa33.19■■■□□ 2.9
CDKN2B-203ENST00000579591 CFTRP13569 1480 aa33.12■■■□□ 2.89
CDKN2B-203ENST00000579591 CEP164Q9UPV0 1460 aa33.12■■■□□ 2.89
CDKN2B-203ENST00000579591 WDR62O43379 1518 aa33.1■■■□□ 2.89
CDKN2B-203ENST00000579591 FANCD2Q9BXW9 1451 aa33.05■■■□□ 2.88
CDKN2B-203ENST00000579591 PRDM2Q13029 1718 aa32.85■■■□□ 2.85
CDKN2B-203ENST00000579591 CCDC88BA6NC98 1476 aa32.81■■■□□ 2.84
CDKN2B-203ENST00000579591 URB2Q14146 1524 aaKnown RBP32.73■■■□□ 2.83
CDKN2B-203ENST00000579591 TRIM41Q8WV44 630 aa32.62■■■□□ 2.81
CDKN2B-203ENST00000579591 ABCC8Q09428 1581 aa32.51■■■□□ 2.79
CDKN2B-203ENST00000579591 IFT140Q96RY7 1462 aa32.45■■■□□ 2.79
CDKN2B-203ENST00000579591 TOPBP1Q92547 1522 aa32.45■■■□□ 2.78
CDKN2B-203ENST00000579591 DNMBPQ6XZF7 1577 aa32.39■■■□□ 2.78
CDKN2B-203ENST00000579591 OSCARQ8IYS5 282 aa32.34■■■□□ 2.77
CDKN2B-203ENST00000579591 ZNF608Q9ULD9 1512 aaPredicted RBP32.26■■■□□ 2.75
CDKN2B-203ENST00000579591 EIF4G3O43432 1585 aaKnown RBP32.16■■■□□ 2.74
CDKN2B-203ENST00000579591 TARBP1Q13395 1621 aaKnown RBP32.14■■■□□ 2.74
CDKN2B-203ENST00000579591 POLA1P09884 1462 aaPredicted RBP32.13■■■□□ 2.73
CDKN2B-203ENST00000579591 AQRO60306 1485 aaKnown RBP eCLIP32■■■□□ 2.71
CDKN2B-203ENST00000579591 SOGA1O94964 1423 aa31.99■■■□□ 2.71
CDKN2B-203ENST00000579591 WDR97A6NE52 1622 aa31.98■■■□□ 2.71
CDKN2B-203ENST00000579591 SUPT5HO00267 1087 aaKnown RBP31.98■■■□□ 2.71
CDKN2B-203ENST00000579591 FGD5Q6ZNL6 1462 aa31.95■■■□□ 2.7
CDKN2B-203ENST00000579591 RAD54L2Q9Y4B4 1467 aa31.94■■■□□ 2.7
CDKN2B-203ENST00000579591 CUX1P39880 1505 aa31.93■■■□□ 2.7
CDKN2B-203ENST00000579591 CHD1O14646 1710 aa31.87■■■□□ 2.69
CDKN2B-203ENST00000579591 RIMBP3CA6NJZ7 1639 aa31.86■■■□□ 2.69
CDKN2B-203ENST00000579591 RIMBP3BA6NNM3 1639 aa31.86■■■□□ 2.69
CDKN2B-203ENST00000579591 RIMBP3Q9UFD9 1639 aa31.86■■■□□ 2.69
CDKN2B-203ENST00000579591 TDRD9Q8NDG6 1382 aaKnown RBP31.84■■■□□ 2.69
CDKN2B-203ENST00000579591 ARHGEF11O15085 1522 aa31.8■■■□□ 2.68
CDKN2B-203ENST00000579591 FBLN2P98095 1184 aa31.76■■■□□ 2.67
CDKN2B-203ENST00000579591 MAGI1Q96QZ7 1491 aaPredicted RBP31.74■■■□□ 2.67
CDKN2B-203ENST00000579591 GRIN2BQ13224 1484 aa31.73■■■□□ 2.67
CDKN2B-203ENST00000579591 SNAPC4Q5SXM2 1469 aa31.72■■■□□ 2.67
CDKN2B-203ENST00000579591 CYB5RLQ6IPT4 315 aa31.65■■■□□ 2.66
CDKN2B-203ENST00000579591 ABCA10Q8WWZ4 1543 aa31.65■■■□□ 2.66
CDKN2B-203ENST00000579591 GAPVD1Q14C86 1478 aa31.62■■■□□ 2.65
CDKN2B-203ENST00000579591 CHMP7Q8WUX9 453 aaPredicted RBP31.62■■■□□ 2.65
CDKN2B-203ENST00000579591 SYNJ2O15056 1496 aa31.6■■■□□ 2.65
CDKN2B-203ENST00000579591 PBRM1Q86U86 1689 aa31.59■■■□□ 2.65
CDKN2B-203ENST00000579591 SYNJ1O43426 1573 aa31.59■■■□□ 2.65
CDKN2B-203ENST00000579591 WRNQ14191 1432 aaPredicted RBP eCLIP31.58■■■□□ 2.65
CDKN2B-203ENST00000579591 ABCA5Q8WWZ7 1642 aa31.56■■■□□ 2.64
CDKN2B-203ENST00000579591 TOP2BQ02880 1626 aa31.54■■■□□ 2.64
CDKN2B-203ENST00000579591 BIVM-ERCC5R4GMW8 1640 aa31.54■■■□□ 2.64
CDKN2B-203ENST00000579591 CLASP1Q7Z460 1538 aa31.54■■■□□ 2.64
CDKN2B-203ENST00000579591 ARAP1Q96P48 1450 aa31.47■■■□□ 2.63
CDKN2B-203ENST00000579591 TRHP20396 242 aaPredicted RBP31.38■■■□□ 2.61
CDKN2B-203ENST00000579591 ADAMTS12P58397 1594 aa31.3■■■□□ 2.6
CDKN2B-203ENST00000579591 GRIN2AQ12879 1464 aa31.3■■■□□ 2.6
CDKN2B-203ENST00000579591 ERICH3Q5RHP9 1530 aa31.29■■■□□ 2.6
CDKN2B-203ENST00000579591 FHAD1B1AJZ9 1412 aa31.25■■■□□ 2.59
CDKN2B-203ENST00000579591 NUP160Q12769 1436 aa31.19■■■□□ 2.58
CDKN2B-203ENST00000579591 CEP170Q5SW79 1584 aa31.13■■■□□ 2.57
CDKN2B-203ENST00000579591 SHROOM2Q13796 1616 aa31.03■■■□□ 2.56
CDKN2B-203ENST00000579591 KIF27Q86VH2 1401 aa30.95■■■□□ 2.54
CDKN2B-203ENST00000579591 ERCC6L2Q5T890 1561 aa30.95■■■□□ 2.54
CDKN2B-203ENST00000579591 CUL7Q14999 1698 aa30.88■■■□□ 2.53
CDKN2B-203ENST00000579591 RUSC2Q8N2Y8 1516 aa30.86■■■□□ 2.53
CDKN2B-203ENST00000579591 PRG4Q92954 1404 aaPredicted RBP30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms