RNA–Protein interactions for RNA: ENST00000579549.6

STRADA-213, Transcript of STE20-related kinase adaptor alpha, humanhuman

TSL 5

Gene STRADA, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADA-213ENST00000579549 NISCHQ9Y2I1 1504 aa41.61■■■■■ 4.25
STRADA-213ENST00000579549 CCDC180Q9P1Z9 1646 aa37.05■■■■□ 3.52
STRADA-213ENST00000579549 ABCC9O60706 1549 aa36.29■■■■□ 3.4
STRADA-213ENST00000579549 RB1CC1Q8TDY2 1594 aa34.89■■■■□ 3.18
STRADA-213ENST00000579549 NACADO15069 1562 aa34.86■■■■□ 3.17
STRADA-213ENST00000579549 MYO15BQ96JP2 1530 aa34.67■■■■□ 3.14
STRADA-213ENST00000579549 DCAF8L2P0C7V8 631 aa34.64■■■■□ 3.14
STRADA-213ENST00000579549 ZCCHC6Q5VYS8 1495 aaKnown RBP34.62■■■■□ 3.13
STRADA-213ENST00000579549 DCAF1Q9Y4B6 1507 aa34.47■■■■□ 3.11
STRADA-213ENST00000579549 UNC13AQ9UPW8 1703 aa34.18■■■■□ 3.06
STRADA-213ENST00000579549 BICRAQ9NZM4 1560 aa33.93■■■■□ 3.02
STRADA-213ENST00000579549 PABPN1Q86U42 306 aaKnown RBP eCLIP33.89■■■■□ 3.02
STRADA-213ENST00000579549 SCRIBQ14160 1630 aa33.71■■■□□ 2.99
STRADA-213ENST00000579549 DNAJC5BQ9UF47 199 aa33.54■■■□□ 2.96
STRADA-213ENST00000579549 SHROOM4Q9ULL8 1493 aa33.52■■■□□ 2.96
STRADA-213ENST00000579549 EIF4G1Q04637 1599 aaKnown RBP32.97■■■□□ 2.87
STRADA-213ENST00000579549 CC2D2AQ9P2K1 1620 aa32.87■■■□□ 2.85
STRADA-213ENST00000579549 CECR2Q9BXF3 1484 aa32.64■■■□□ 2.82
STRADA-213ENST00000579549 SMARCA4P51532 1647 aa32.29■■■□□ 2.76
STRADA-213ENST00000579549 BAZ1AQ9NRL2 1556 aaPredicted RBP32.22■■■□□ 2.75
STRADA-213ENST00000579549 NCAPD3P42695 1498 aa32.2■■■□□ 2.75
STRADA-213ENST00000579549 ATAD2BQ9ULI0 1458 aa32.16■■■□□ 2.74
STRADA-213ENST00000579549 SMARCA2P51531 1590 aa32.09■■■□□ 2.73
STRADA-213ENST00000579549 MROH2BQ7Z745 1585 aa32.06■■■□□ 2.72
STRADA-213ENST00000579549 PEG3Q9GZU2 1588 aa32.04■■■□□ 2.72
STRADA-213ENST00000579549 HMGXB3Q12766 1538 aa31.99■■■□□ 2.71
STRADA-213ENST00000579549 BAZ1BQ9UIG0 1483 aaKnown RBP31.82■■■□□ 2.68
STRADA-213ENST00000579549 WIZO95785 1651 aa31.69■■■□□ 2.66
STRADA-213ENST00000579549 RSF1Q96T23 1441 aaPredicted RBP31.65■■■□□ 2.66
STRADA-213ENST00000579549 NESP48681 1621 aa31.41■■■□□ 2.62
STRADA-213ENST00000579549 TOP2AP11388 1531 aaKnown RBP31.34■■■□□ 2.61
STRADA-213ENST00000579549 LAMC3Q9Y6N6 1575 aa31.32■■■□□ 2.6
STRADA-213ENST00000579549 ERCC6Q03468 1493 aa31.23■■■□□ 2.59
STRADA-213ENST00000579549 CADPSQ9ULU8 1353 aa31.21■■■□□ 2.59
STRADA-213ENST00000579549 PDS5BQ9NTI5 1447 aa31.08■■■□□ 2.57
STRADA-213ENST00000579549 CUX2O14529 1486 aa31.05■■■□□ 2.56
STRADA-213ENST00000579549 KIF21AQ7Z4S6 1674 aa31.04■■■□□ 2.56
STRADA-213ENST00000579549 CFTRP13569 1480 aa31.02■■■□□ 2.56
STRADA-213ENST00000579549 THOC2Q8NI27 1593 aaKnown RBP30.98■■■□□ 2.55
STRADA-213ENST00000579549 CCDC88BA6NC98 1476 aa30.98■■■□□ 2.55
STRADA-213ENST00000579549 FANCD2Q9BXW9 1451 aa30.82■■■□□ 2.52
STRADA-213ENST00000579549 MRC2Q9UBG0 1479 aa30.77■■■□□ 2.52
STRADA-213ENST00000579549 PRDM2Q13029 1718 aa30.77■■■□□ 2.52
STRADA-213ENST00000579549 CEP164Q9UPV0 1460 aa30.76■■■□□ 2.52
STRADA-213ENST00000579549 WDR62O43379 1518 aa30.71■■■□□ 2.51
STRADA-213ENST00000579549 SUPT5HO00267 1087 aaKnown RBP30.61■■■□□ 2.49
STRADA-213ENST00000579549 URB2Q14146 1524 aaKnown RBP30.56■■■□□ 2.48
STRADA-213ENST00000579549 ABCC8Q09428 1581 aa30.33■■■□□ 2.45
STRADA-213ENST00000579549 TOPBP1Q92547 1522 aa30.33■■■□□ 2.45
STRADA-213ENST00000579549 DNAJC5Q9H3Z4 198 aa30.29■■■□□ 2.44
STRADA-213ENST00000579549 DNMBPQ6XZF7 1577 aa30.28■■■□□ 2.44
STRADA-213ENST00000579549 IFT140Q96RY7 1462 aa30.16■■■□□ 2.42
STRADA-213ENST00000579549 CUX1P39880 1505 aa30.06■■■□□ 2.4
STRADA-213ENST00000579549 POLA1P09884 1462 aaPredicted RBP30.06■■■□□ 2.4
STRADA-213ENST00000579549 TARBP1Q13395 1621 aaKnown RBP30.06■■■□□ 2.4
STRADA-213ENST00000579549 ZNF608Q9ULD9 1512 aaPredicted RBP30.05■■■□□ 2.4
STRADA-213ENST00000579549 FGD5Q6ZNL6 1462 aa29.95■■■□□ 2.39
STRADA-213ENST00000579549 SOGA1O94964 1423 aa29.93■■■□□ 2.38
STRADA-213ENST00000579549 RAD54L2Q9Y4B4 1467 aa29.93■■■□□ 2.38
STRADA-213ENST00000579549 EIF4G3O43432 1585 aaKnown RBP29.9■■■□□ 2.38
STRADA-213ENST00000579549 AQRO60306 1485 aaKnown RBP eCLIP29.85■■■□□ 2.373e-6■■□□□ 13.8
STRADA-213ENST00000579549 WDR97A6NE52 1622 aa29.79■■■□□ 2.36
STRADA-213ENST00000579549 BIVM-ERCC5R4GMW8 1640 aa29.79■■■□□ 2.36
STRADA-213ENST00000579549 WRNQ14191 1432 aaPredicted RBP eCLIP29.79■■■□□ 2.36
STRADA-213ENST00000579549 TOP2BQ02880 1626 aa29.78■■■□□ 2.36
STRADA-213ENST00000579549 TDRD9Q8NDG6 1382 aaKnown RBP29.77■■■□□ 2.36
STRADA-213ENST00000579549 SYNJ1O43426 1573 aa29.75■■■□□ 2.35
STRADA-213ENST00000579549 OSCARQ8IYS5 282 aa29.73■■■□□ 2.35
STRADA-213ENST00000579549 ABCA10Q8WWZ4 1543 aa29.7■■■□□ 2.34
STRADA-213ENST00000579549 GRIN2BQ13224 1484 aa29.59■■■□□ 2.33
STRADA-213ENST00000579549 ABCA5Q8WWZ7 1642 aa29.59■■■□□ 2.33
STRADA-213ENST00000579549 CHD1O14646 1710 aa29.57■■■□□ 2.32
STRADA-213ENST00000579549 GAPVD1Q14C86 1478 aa29.57■■■□□ 2.32
STRADA-213ENST00000579549 SNAPC4Q5SXM2 1469 aa29.55■■■□□ 2.32
STRADA-213ENST00000579549 MAGI1Q96QZ7 1491 aaPredicted RBP29.54■■■□□ 2.32
STRADA-213ENST00000579549 PBRM1Q86U86 1689 aa29.53■■■□□ 2.32
STRADA-213ENST00000579549 SYNJ2O15056 1496 aa29.42■■■□□ 2.3
STRADA-213ENST00000579549 FBLN2P98095 1184 aa29.41■■■□□ 2.3
STRADA-213ENST00000579549 CHMP7Q8WUX9 453 aaPredicted RBP29.37■■■□□ 2.29
STRADA-213ENST00000579549 ERICH3Q5RHP9 1530 aa29.33■■■□□ 2.29
STRADA-213ENST00000579549 ADAMTS12P58397 1594 aa29.28■■■□□ 2.28
STRADA-213ENST00000579549 CLASP1Q7Z460 1538 aa29.28■■■□□ 2.28
STRADA-213ENST00000579549 RIMBP3CA6NJZ7 1639 aa29.27■■■□□ 2.28
STRADA-213ENST00000579549 RIMBP3BA6NNM3 1639 aa29.27■■■□□ 2.28
STRADA-213ENST00000579549 RIMBP3Q9UFD9 1639 aa29.27■■■□□ 2.28
STRADA-213ENST00000579549 ARHGEF11O15085 1522 aa29.25■■■□□ 2.27
STRADA-213ENST00000579549 FHAD1B1AJZ9 1412 aa29.24■■■□□ 2.27
STRADA-213ENST00000579549 GRIN2AQ12879 1464 aa29.21■■■□□ 2.27
STRADA-213ENST00000579549 KIF27Q86VH2 1401 aa29.16■■■□□ 2.26
STRADA-213ENST00000579549 IGF1RP08069 1367 aa29.13■■■□□ 2.25
STRADA-213ENST00000579549 NUP160Q12769 1436 aa29.13■■■□□ 2.25
STRADA-213ENST00000579549 CEP170Q5SW79 1584 aa29.09■■■□□ 2.25
STRADA-213ENST00000579549 TRIM41Q8WV44 630 aa29.08■■■□□ 2.25
STRADA-213ENST00000579549 ARAP1Q96P48 1450 aa29.02■■■□□ 2.24
STRADA-213ENST00000579549 CUL7Q14999 1698 aa29.02■■■□□ 2.24
STRADA-213ENST00000579549 CYB5RLQ6IPT4 315 aa28.95■■■□□ 2.22
STRADA-213ENST00000579549 SHROOM2Q13796 1616 aa28.94■■■□□ 2.22
STRADA-213ENST00000579549 RUSC2Q8N2Y8 1516 aa28.92■■■□□ 2.22
STRADA-213ENST00000579549 CARMIL1Q5VZK9 1371 aa28.91■■■□□ 2.22
STRADA-213ENST00000579549 ERCC6L2Q5T890 1561 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms