RNA–Protein interactions for RNA: ENST00000579474.1

LINC02563-201, Transcript of long intergenic non-protein coding RNA 2563, humanhuman

TSL 3 BASIC

Gene LINC02563, Length 277 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02563-201ENST00000579474 NISCHQ9Y2I1 1504 aa13.46□□□□□ -0.25
LINC02563-201ENST00000579474 CCDC180Q9P1Z9 1646 aa11.92□□□□□ -0.5
LINC02563-201ENST00000579474 ABCC9O60706 1549 aa11.39□□□□□ -0.59
LINC02563-201ENST00000579474 ZCCHC6Q5VYS8 1495 aaKnown RBP11.3□□□□□ -0.6
LINC02563-201ENST00000579474 DCAF1Q9Y4B6 1507 aa11.17□□□□□ -0.62
LINC02563-201ENST00000579474 MYO15BQ96JP2 1530 aa11.13□□□□□ -0.63
LINC02563-201ENST00000579474 NACADO15069 1562 aa11.12□□□□□ -0.63
LINC02563-201ENST00000579474 RB1CC1Q8TDY2 1594 aa11.09□□□□□ -0.63
LINC02563-201ENST00000579474 DCAF8L2P0C7V8 631 aa11.09□□□□□ -0.63
LINC02563-201ENST00000579474 SCRIBQ14160 1630 aa10.89□□□□□ -0.67
LINC02563-201ENST00000579474 UNC13AQ9UPW8 1703 aa10.81□□□□□ -0.68
LINC02563-201ENST00000579474 SHROOM4Q9ULL8 1493 aa10.76□□□□□ -0.69
LINC02563-201ENST00000579474 BICRAQ9NZM4 1560 aa10.7□□□□□ -0.7
LINC02563-201ENST00000579474 PABPN1Q86U42 306 aaKnown RBP eCLIP10.62□□□□□ -0.71
LINC02563-201ENST00000579474 BAZ1AQ9NRL2 1556 aaPredicted RBP10.45□□□□□ -0.74
LINC02563-201ENST00000579474 EIF4G1Q04637 1599 aaKnown RBP10.43□□□□□ -0.74
LINC02563-201ENST00000579474 SMARCA4P51532 1647 aa10.42□□□□□ -0.74
LINC02563-201ENST00000579474 CECR2Q9BXF3 1484 aa10.42□□□□□ -0.74
LINC02563-201ENST00000579474 MROH2BQ7Z745 1585 aa10.37□□□□□ -0.75
LINC02563-201ENST00000579474 RSF1Q96T23 1441 aaPredicted RBP10.33□□□□□ -0.76
LINC02563-201ENST00000579474 CC2D2AQ9P2K1 1620 aa10.32□□□□□ -0.76
LINC02563-201ENST00000579474 SMARCA2P51531 1590 aa10.31□□□□□ -0.76
LINC02563-201ENST00000579474 PEG3Q9GZU2 1588 aa10.31□□□□□ -0.76
LINC02563-201ENST00000579474 WIZO95785 1651 aa10.28□□□□□ -0.76
LINC02563-201ENST00000579474 ATAD2BQ9ULI0 1458 aa10.27□□□□□ -0.77
LINC02563-201ENST00000579474 HMGXB3Q12766 1538 aa10.25□□□□□ -0.77
LINC02563-201ENST00000579474 BAZ1BQ9UIG0 1483 aaKnown RBP10.24□□□□□ -0.77
LINC02563-201ENST00000579474 NCAPD3P42695 1498 aa10.22□□□□□ -0.77
LINC02563-201ENST00000579474 TOP2AP11388 1531 aaKnown RBP10.22□□□□□ -0.77
LINC02563-201ENST00000579474 SUPT5HO00267 1087 aaKnown RBP10.21□□□□□ -0.77
LINC02563-201ENST00000579474 DNAJC5BQ9UF47 199 aa10.11□□□□□ -0.79
LINC02563-201ENST00000579474 CCDC88BA6NC98 1476 aa10.04□□□□□ -0.8
LINC02563-201ENST00000579474 LAMC3Q9Y6N6 1575 aa9.97□□□□□ -0.81
LINC02563-201ENST00000579474 PRDM2Q13029 1718 aa9.94□□□□□ -0.82
LINC02563-201ENST00000579474 CFTRP13569 1480 aa9.94□□□□□ -0.82
LINC02563-201ENST00000579474 CADPSQ9ULU8 1353 aa9.93□□□□□ -0.82
LINC02563-201ENST00000579474 NESP48681 1621 aa9.9□□□□□ -0.82
LINC02563-201ENST00000579474 PDS5BQ9NTI5 1447 aa9.87□□□□□ -0.83
LINC02563-201ENST00000579474 FANCD2Q9BXW9 1451 aa9.85□□□□□ -0.83
LINC02563-201ENST00000579474 CEP164Q9UPV0 1460 aa9.85□□□□□ -0.83
LINC02563-201ENST00000579474 ERCC6Q03468 1493 aa9.85□□□□□ -0.83
LINC02563-201ENST00000579474 KIF21AQ7Z4S6 1674 aa9.83□□□□□ -0.84
LINC02563-201ENST00000579474 MRC2Q9UBG0 1479 aa9.78□□□□□ -0.84
LINC02563-201ENST00000579474 ABCC8Q09428 1581 aa9.77□□□□□ -0.85
LINC02563-201ENST00000579474 THOC2Q8NI27 1593 aaKnown RBP9.76□□□□□ -0.85
LINC02563-201ENST00000579474 WRNQ14191 1432 aaPredicted RBP eCLIP9.76□□□□□ -0.85
LINC02563-201ENST00000579474 DNMBPQ6XZF7 1577 aa9.75□□□□□ -0.85
LINC02563-201ENST00000579474 WDR62O43379 1518 aa9.73□□□□□ -0.85
LINC02563-201ENST00000579474 CUX1P39880 1505 aa9.73□□□□□ -0.85
LINC02563-201ENST00000579474 BIVM-ERCC5R4GMW8 1640 aa9.73□□□□□ -0.85
LINC02563-201ENST00000579474 URB2Q14146 1524 aaKnown RBP9.72□□□□□ -0.85
LINC02563-201ENST00000579474 SYNJ1O43426 1573 aa9.72□□□□□ -0.85
LINC02563-201ENST00000579474 TOP2BQ02880 1626 aa9.72□□□□□ -0.85
LINC02563-201ENST00000579474 TOPBP1Q92547 1522 aa9.72□□□□□ -0.85
LINC02563-201ENST00000579474 FGD5Q6ZNL6 1462 aa9.66□□□□□ -0.86
LINC02563-201ENST00000579474 POLA1P09884 1462 aaPredicted RBP9.66□□□□□ -0.86
LINC02563-201ENST00000579474 CHIC1Q5VXU3 224 aa9.64□□□□□ -0.87
LINC02563-201ENST00000579474 TRIM41Q8WV44 630 aa9.64□□□□□ -0.87
LINC02563-201ENST00000579474 CUX2O14529 1486 aa9.64□□□□□ -0.87
LINC02563-201ENST00000579474 IFT140Q96RY7 1462 aa9.61□□□□□ -0.87
LINC02563-201ENST00000579474 WDR97A6NE52 1622 aa9.6□□□□□ -0.87
LINC02563-201ENST00000579474 TARBP1Q13395 1621 aaKnown RBP9.59□□□□□ -0.87
LINC02563-201ENST00000579474 SOGA1O94964 1423 aa9.58□□□□□ -0.88
LINC02563-201ENST00000579474 ABCA10Q8WWZ4 1543 aa9.58□□□□□ -0.88
LINC02563-201ENST00000579474 RAD54L2Q9Y4B4 1467 aa9.58□□□□□ -0.88
LINC02563-201ENST00000579474 EIF4G3O43432 1585 aaKnown RBP9.55□□□□□ -0.88
LINC02563-201ENST00000579474 ABCA5Q8WWZ7 1642 aa9.54□□□□□ -0.88
LINC02563-201ENST00000579474 EEA1Q15075 1411 aa9.54□□□□□ -0.88
LINC02563-201ENST00000579474 KIF27Q86VH2 1401 aa9.54□□□□□ -0.88
LINC02563-201ENST00000579474 PBRM1Q86U86 1689 aa9.51□□□□□ -0.89
LINC02563-201ENST00000579474 ZNF608Q9ULD9 1512 aaPredicted RBP9.51□□□□□ -0.89
LINC02563-201ENST00000579474 GAPVD1Q14C86 1478 aa9.51□□□□□ -0.89
LINC02563-201ENST00000579474 TDRD9Q8NDG6 1382 aaKnown RBP9.5□□□□□ -0.89
LINC02563-201ENST00000579474 ERICH3Q5RHP9 1530 aa9.49□□□□□ -0.89
LINC02563-201ENST00000579474 GRIN2BQ13224 1484 aa9.48□□□□□ -0.89
LINC02563-201ENST00000579474 CUL7Q14999 1698 aa9.48□□□□□ -0.89
LINC02563-201ENST00000579474 AQRO60306 1485 aaKnown RBP eCLIP9.47□□□□□ -0.89
LINC02563-201ENST00000579474 SNAPC4Q5SXM2 1469 aa9.46□□□□□ -0.9
LINC02563-201ENST00000579474 RUSC2Q8N2Y8 1516 aa9.46□□□□□ -0.9
LINC02563-201ENST00000579474 ADAMTS12P58397 1594 aa9.46□□□□□ -0.9
LINC02563-201ENST00000579474 MAGI1Q96QZ7 1491 aaPredicted RBP9.45□□□□□ -0.9
LINC02563-201ENST00000579474 FAM9AQ8IZU1 332 aaPredicted RBP9.43□□□□□ -0.9
LINC02563-201ENST00000579474 KIF21BO75037 1637 aa9.42□□□□□ -0.9
LINC02563-201ENST00000579474 FHAD1B1AJZ9 1412 aa9.41□□□□□ -0.9
LINC02563-201ENST00000579474 SYNJ2O15056 1496 aa9.4□□□□□ -0.9
LINC02563-201ENST00000579474 IGF1RP08069 1367 aa9.4□□□□□ -0.9
LINC02563-201ENST00000579474 CSRNP3Q8WYN3 585 aa9.4□□□□□ -0.9
LINC02563-201ENST00000579474 PRXQ9BXM0 1461 aa9.4□□□□□ -0.91
LINC02563-201ENST00000579474 GOLGA3Q08378 1498 aa9.39□□□□□ -0.91
LINC02563-201ENST00000579474 RAPGEF2Q9Y4G8 1499 aa9.39□□□□□ -0.91
LINC02563-201ENST00000579474 CARMIL1Q5VZK9 1371 aa9.38□□□□□ -0.91
LINC02563-201ENST00000579474 GRIN2AQ12879 1464 aa9.37□□□□□ -0.91
LINC02563-201ENST00000579474 CHD1O14646 1710 aa9.36□□□□□ -0.91
LINC02563-201ENST00000579474 CTTNBP2Q8WZ74 1663 aa9.33□□□□□ -0.92
LINC02563-201ENST00000579474 CHMP7Q8WUX9 453 aaPredicted RBP9.33□□□□□ -0.92
LINC02563-201ENST00000579474 FBLN2P98095 1184 aa9.32□□□□□ -0.92
LINC02563-201ENST00000579474 CEP170Q5SW79 1584 aa9.31□□□□□ -0.92
LINC02563-201ENST00000579474 NUP160Q12769 1436 aa9.31□□□□□ -0.92
LINC02563-201ENST00000579474 EHMT2Q96KQ7 1210 aa9.3□□□□□ -0.92
LINC02563-201ENST00000579474 IQGAP2Q13576 1575 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms