RNA–Protein interactions for RNA: ENST00000579474.1

LINC02563-201, Transcript of long intergenic non-protein coding RNA 2563, humanhuman

TSL 3 BASIC

Gene LINC02563, Length 277 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02563-201ENST00000579474 NISCHQ9Y2I1 1504 aa13.46□□□□□ -0.25
LINC02563-201ENST00000579474 CCDC180Q9P1Z9 1646 aa11.92□□□□□ -0.5
LINC02563-201ENST00000579474 ABCC9O60706 1549 aa11.39□□□□□ -0.59
LINC02563-201ENST00000579474 ZCCHC6Q5VYS8 1495 aaKnown RBP11.3□□□□□ -0.6
LINC02563-201ENST00000579474 DCAF1Q9Y4B6 1507 aa11.17□□□□□ -0.62
LINC02563-201ENST00000579474 MYO15BQ96JP2 1530 aa11.13□□□□□ -0.63
LINC02563-201ENST00000579474 NACADO15069 1562 aa11.12□□□□□ -0.63
LINC02563-201ENST00000579474 RB1CC1Q8TDY2 1594 aa11.09□□□□□ -0.63
LINC02563-201ENST00000579474 DCAF8L2P0C7V8 631 aa11.09□□□□□ -0.63
LINC02563-201ENST00000579474 SCRIBQ14160 1630 aa10.89□□□□□ -0.67
LINC02563-201ENST00000579474 UNC13AQ9UPW8 1703 aa10.81□□□□□ -0.68
LINC02563-201ENST00000579474 SHROOM4Q9ULL8 1493 aa10.76□□□□□ -0.69
LINC02563-201ENST00000579474 BICRAQ9NZM4 1560 aa10.7□□□□□ -0.7
LINC02563-201ENST00000579474 PABPN1Q86U42 306 aaKnown RBP eCLIP10.62□□□□□ -0.71
LINC02563-201ENST00000579474 BAZ1AQ9NRL2 1556 aaPredicted RBP10.45□□□□□ -0.74
LINC02563-201ENST00000579474 EIF4G1Q04637 1599 aaKnown RBP10.43□□□□□ -0.74
LINC02563-201ENST00000579474 SMARCA4P51532 1647 aa10.42□□□□□ -0.74
LINC02563-201ENST00000579474 CECR2Q9BXF3 1484 aa10.42□□□□□ -0.74
LINC02563-201ENST00000579474 MROH2BQ7Z745 1585 aa10.37□□□□□ -0.75
LINC02563-201ENST00000579474 RSF1Q96T23 1441 aaPredicted RBP10.33□□□□□ -0.76
LINC02563-201ENST00000579474 CC2D2AQ9P2K1 1620 aa10.32□□□□□ -0.76
LINC02563-201ENST00000579474 SMARCA2P51531 1590 aa10.31□□□□□ -0.76
LINC02563-201ENST00000579474 PEG3Q9GZU2 1588 aa10.31□□□□□ -0.76
LINC02563-201ENST00000579474 WIZO95785 1651 aa10.28□□□□□ -0.76
LINC02563-201ENST00000579474 ATAD2BQ9ULI0 1458 aa10.27□□□□□ -0.77
LINC02563-201ENST00000579474 HMGXB3Q12766 1538 aa10.25□□□□□ -0.77
LINC02563-201ENST00000579474 BAZ1BQ9UIG0 1483 aaKnown RBP10.24□□□□□ -0.77
LINC02563-201ENST00000579474 NCAPD3P42695 1498 aa10.22□□□□□ -0.77
LINC02563-201ENST00000579474 TOP2AP11388 1531 aaKnown RBP10.22□□□□□ -0.77
LINC02563-201ENST00000579474 SUPT5HO00267 1087 aaKnown RBP10.21□□□□□ -0.77
LINC02563-201ENST00000579474 DNAJC5BQ9UF47 199 aa10.11□□□□□ -0.79
LINC02563-201ENST00000579474 CCDC88BA6NC98 1476 aa10.04□□□□□ -0.8
LINC02563-201ENST00000579474 LAMC3Q9Y6N6 1575 aa9.97□□□□□ -0.81
LINC02563-201ENST00000579474 PRDM2Q13029 1718 aa9.94□□□□□ -0.82
LINC02563-201ENST00000579474 CFTRP13569 1480 aa9.94□□□□□ -0.82
LINC02563-201ENST00000579474 CADPSQ9ULU8 1353 aa9.93□□□□□ -0.82
LINC02563-201ENST00000579474 NESP48681 1621 aa9.9□□□□□ -0.82
LINC02563-201ENST00000579474 PDS5BQ9NTI5 1447 aa9.87□□□□□ -0.83
LINC02563-201ENST00000579474 FANCD2Q9BXW9 1451 aa9.85□□□□□ -0.83
LINC02563-201ENST00000579474 CEP164Q9UPV0 1460 aa9.85□□□□□ -0.83
LINC02563-201ENST00000579474 ERCC6Q03468 1493 aa9.85□□□□□ -0.83
LINC02563-201ENST00000579474 KIF21AQ7Z4S6 1674 aa9.83□□□□□ -0.84
LINC02563-201ENST00000579474 MRC2Q9UBG0 1479 aa9.78□□□□□ -0.84
LINC02563-201ENST00000579474 ABCC8Q09428 1581 aa9.77□□□□□ -0.85
LINC02563-201ENST00000579474 THOC2Q8NI27 1593 aaKnown RBP9.76□□□□□ -0.85
LINC02563-201ENST00000579474 WRNQ14191 1432 aaPredicted RBP eCLIP9.76□□□□□ -0.85
LINC02563-201ENST00000579474 DNMBPQ6XZF7 1577 aa9.75□□□□□ -0.85
LINC02563-201ENST00000579474 WDR62O43379 1518 aa9.73□□□□□ -0.85
LINC02563-201ENST00000579474 CUX1P39880 1505 aa9.73□□□□□ -0.85
LINC02563-201ENST00000579474 BIVM-ERCC5R4GMW8 1640 aa9.73□□□□□ -0.85
LINC02563-201ENST00000579474 URB2Q14146 1524 aaKnown RBP9.72□□□□□ -0.85
LINC02563-201ENST00000579474 SYNJ1O43426 1573 aa9.72□□□□□ -0.85
LINC02563-201ENST00000579474 TOP2BQ02880 1626 aa9.72□□□□□ -0.85
LINC02563-201ENST00000579474 TOPBP1Q92547 1522 aa9.72□□□□□ -0.85
LINC02563-201ENST00000579474 FGD5Q6ZNL6 1462 aa9.66□□□□□ -0.86
LINC02563-201ENST00000579474 POLA1P09884 1462 aaPredicted RBP9.66□□□□□ -0.86
LINC02563-201ENST00000579474 CHIC1Q5VXU3 224 aa9.64□□□□□ -0.87
LINC02563-201ENST00000579474 TRIM41Q8WV44 630 aa9.64□□□□□ -0.87
LINC02563-201ENST00000579474 CUX2O14529 1486 aa9.64□□□□□ -0.87
LINC02563-201ENST00000579474 IFT140Q96RY7 1462 aa9.61□□□□□ -0.87
LINC02563-201ENST00000579474 WDR97A6NE52 1622 aa9.6□□□□□ -0.87
LINC02563-201ENST00000579474 TARBP1Q13395 1621 aaKnown RBP9.59□□□□□ -0.87
LINC02563-201ENST00000579474 SOGA1O94964 1423 aa9.58□□□□□ -0.88
LINC02563-201ENST00000579474 ABCA10Q8WWZ4 1543 aa9.58□□□□□ -0.88
LINC02563-201ENST00000579474 RAD54L2Q9Y4B4 1467 aa9.58□□□□□ -0.88
LINC02563-201ENST00000579474 EIF4G3O43432 1585 aaKnown RBP9.55□□□□□ -0.88
LINC02563-201ENST00000579474 ABCA5Q8WWZ7 1642 aa9.54□□□□□ -0.88
LINC02563-201ENST00000579474 EEA1Q15075 1411 aa9.54□□□□□ -0.88
LINC02563-201ENST00000579474 KIF27Q86VH2 1401 aa9.54□□□□□ -0.88
LINC02563-201ENST00000579474 PBRM1Q86U86 1689 aa9.51□□□□□ -0.89
LINC02563-201ENST00000579474 ZNF608Q9ULD9 1512 aaPredicted RBP9.51□□□□□ -0.89
LINC02563-201ENST00000579474 GAPVD1Q14C86 1478 aa9.51□□□□□ -0.89
LINC02563-201ENST00000579474 TDRD9Q8NDG6 1382 aaKnown RBP9.5□□□□□ -0.89
LINC02563-201ENST00000579474 ERICH3Q5RHP9 1530 aa9.49□□□□□ -0.89
LINC02563-201ENST00000579474 GRIN2BQ13224 1484 aa9.48□□□□□ -0.89
LINC02563-201ENST00000579474 CUL7Q14999 1698 aa9.48□□□□□ -0.89
LINC02563-201ENST00000579474 AQRO60306 1485 aaKnown RBP eCLIP9.47□□□□□ -0.89
LINC02563-201ENST00000579474 SNAPC4Q5SXM2 1469 aa9.46□□□□□ -0.9
LINC02563-201ENST00000579474 RUSC2Q8N2Y8 1516 aa9.46□□□□□ -0.9
LINC02563-201ENST00000579474 ADAMTS12P58397 1594 aa9.46□□□□□ -0.9
LINC02563-201ENST00000579474 MAGI1Q96QZ7 1491 aaPredicted RBP9.45□□□□□ -0.9
LINC02563-201ENST00000579474 FAM9AQ8IZU1 332 aaPredicted RBP9.43□□□□□ -0.9
LINC02563-201ENST00000579474 KIF21BO75037 1637 aa9.42□□□□□ -0.9
LINC02563-201ENST00000579474 FHAD1B1AJZ9 1412 aa9.41□□□□□ -0.9
LINC02563-201ENST00000579474 SYNJ2O15056 1496 aa9.4□□□□□ -0.9
LINC02563-201ENST00000579474 IGF1RP08069 1367 aa9.4□□□□□ -0.9
LINC02563-201ENST00000579474 CSRNP3Q8WYN3 585 aa9.4□□□□□ -0.9
LINC02563-201ENST00000579474 PRXQ9BXM0 1461 aa9.4□□□□□ -0.91
LINC02563-201ENST00000579474 GOLGA3Q08378 1498 aa9.39□□□□□ -0.91
LINC02563-201ENST00000579474 RAPGEF2Q9Y4G8 1499 aa9.39□□□□□ -0.91
LINC02563-201ENST00000579474 CARMIL1Q5VZK9 1371 aa9.38□□□□□ -0.91
LINC02563-201ENST00000579474 GRIN2AQ12879 1464 aa9.37□□□□□ -0.91
LINC02563-201ENST00000579474 CHD1O14646 1710 aa9.36□□□□□ -0.91
LINC02563-201ENST00000579474 CTTNBP2Q8WZ74 1663 aa9.33□□□□□ -0.92
LINC02563-201ENST00000579474 CHMP7Q8WUX9 453 aaPredicted RBP9.33□□□□□ -0.92
LINC02563-201ENST00000579474 FBLN2P98095 1184 aa9.32□□□□□ -0.92
LINC02563-201ENST00000579474 CEP170Q5SW79 1584 aa9.31□□□□□ -0.92
LINC02563-201ENST00000579474 NUP160Q12769 1436 aa9.31□□□□□ -0.92
LINC02563-201ENST00000579474 EHMT2Q96KQ7 1210 aa9.3□□□□□ -0.92
LINC02563-201ENST00000579474 IQGAP2Q13576 1575 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms