RNA–Protein interactions for RNA: ENST00000579378.1

AC011840.3-201, humanhuman

TSL 3 BASIC

Gene AC011840.3, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011840.3-201ENST00000579378 NISCHQ9Y2I1 1504 aa21.33■■□□□ 1
AC011840.3-201ENST00000579378 ABCC9O60706 1549 aa19.46■□□□□ 0.71
AC011840.3-201ENST00000579378 CCDC180Q9P1Z9 1646 aa19.21■□□□□ 0.67
AC011840.3-201ENST00000579378 DNAJC5BQ9UF47 199 aa18.53■□□□□ 0.56
AC011840.3-201ENST00000579378 RB1CC1Q8TDY2 1594 aa18.4■□□□□ 0.54
AC011840.3-201ENST00000579378 NACADO15069 1562 aa18.23■□□□□ 0.51
AC011840.3-201ENST00000579378 DCAF8L2P0C7V8 631 aa18.17■□□□□ 0.5
AC011840.3-201ENST00000579378 PABPN1Q86U42 306 aaKnown RBP eCLIP18.12■□□□□ 0.49
AC011840.3-201ENST00000579378 UNC13AQ9UPW8 1703 aa18.04■□□□□ 0.48
AC011840.3-201ENST00000579378 BICRAQ9NZM4 1560 aa17.9■□□□□ 0.46
AC011840.3-201ENST00000579378 MYO15BQ96JP2 1530 aa17.88■□□□□ 0.45
AC011840.3-201ENST00000579378 ZCCHC6Q5VYS8 1495 aaKnown RBP17.59■□□□□ 0.41
AC011840.3-201ENST00000579378 DCAF1Q9Y4B6 1507 aa17.58■□□□□ 0.41
AC011840.3-201ENST00000579378 CC2D2AQ9P2K1 1620 aa17.57■□□□□ 0.4
AC011840.3-201ENST00000579378 SHROOM4Q9ULL8 1493 aa17.56■□□□□ 0.4
AC011840.3-201ENST00000579378 CECR2Q9BXF3 1484 aa17.54■□□□□ 0.4
AC011840.3-201ENST00000579378 SCRIBQ14160 1630 aa17.49■□□□□ 0.39
AC011840.3-201ENST00000579378 EIF4G1Q04637 1599 aaKnown RBP17.45■□□□□ 0.38
AC011840.3-201ENST00000579378 DNAJC5Q9H3Z4 198 aa17.16■□□□□ 0.34
AC011840.3-201ENST00000579378 NCAPD3P42695 1498 aa16.85■□□□□ 0.29
AC011840.3-201ENST00000579378 CUX2O14529 1486 aa16.83■□□□□ 0.28
AC011840.3-201ENST00000579378 ERCC6Q03468 1493 aa16.79■□□□□ 0.28
AC011840.3-201ENST00000579378 ATAD2BQ9ULI0 1458 aa16.76■□□□□ 0.27
AC011840.3-201ENST00000579378 SMARCA2P51531 1590 aa16.68■□□□□ 0.26
AC011840.3-201ENST00000579378 SMARCA4P51532 1647 aa16.67■□□□□ 0.26
AC011840.3-201ENST00000579378 HMGXB3Q12766 1538 aa16.66■□□□□ 0.26
AC011840.3-201ENST00000579378 NESP48681 1621 aa16.66■□□□□ 0.26
AC011840.3-201ENST00000579378 BAZ1BQ9UIG0 1483 aaKnown RBP16.56■□□□□ 0.24
AC011840.3-201ENST00000579378 BAZ1AQ9NRL2 1556 aaPredicted RBP16.55■□□□□ 0.24
AC011840.3-201ENST00000579378 PEG3Q9GZU2 1588 aa16.51■□□□□ 0.23
AC011840.3-201ENST00000579378 THOC2Q8NI27 1593 aaKnown RBP16.5■□□□□ 0.23
AC011840.3-201ENST00000579378 LAMC3Q9Y6N6 1575 aa16.48■□□□□ 0.23
AC011840.3-201ENST00000579378 KIF21AQ7Z4S6 1674 aa16.43■□□□□ 0.22
AC011840.3-201ENST00000579378 MROH2BQ7Z745 1585 aa16.43■□□□□ 0.22
AC011840.3-201ENST00000579378 PDS5BQ9NTI5 1447 aa16.41■□□□□ 0.22
AC011840.3-201ENST00000579378 CADPSQ9ULU8 1353 aa16.33■□□□□ 0.2
AC011840.3-201ENST00000579378 TRIM41Q8WV44 630 aa16.3■□□□□ 0.2
AC011840.3-201ENST00000579378 MRC2Q9UBG0 1479 aa16.26■□□□□ 0.19
AC011840.3-201ENST00000579378 WIZO95785 1651 aa16.24■□□□□ 0.19
AC011840.3-201ENST00000579378 WDR62O43379 1518 aa16.22■□□□□ 0.19
AC011840.3-201ENST00000579378 CEP164Q9UPV0 1460 aa16.16■□□□□ 0.18
AC011840.3-201ENST00000579378 FANCD2Q9BXW9 1451 aa16.13■□□□□ 0.17
AC011840.3-201ENST00000579378 OSCARQ8IYS5 282 aa16.1■□□□□ 0.17
AC011840.3-201ENST00000579378 CFTRP13569 1480 aa16.08■□□□□ 0.16
AC011840.3-201ENST00000579378 RSF1Q96T23 1441 aaPredicted RBP16.02■□□□□ 0.15
AC011840.3-201ENST00000579378 URB2Q14146 1524 aaKnown RBP16.01■□□□□ 0.15
AC011840.3-201ENST00000579378 TOP2AP11388 1531 aaKnown RBP15.97■□□□□ 0.15
AC011840.3-201ENST00000579378 PRDM2Q13029 1718 aa15.91■□□□□ 0.14
AC011840.3-201ENST00000579378 RIMBP3CA6NJZ7 1639 aa15.87■□□□□ 0.13
AC011840.3-201ENST00000579378 RIMBP3BA6NNM3 1639 aa15.87■□□□□ 0.13
AC011840.3-201ENST00000579378 RIMBP3Q9UFD9 1639 aa15.87■□□□□ 0.13
AC011840.3-201ENST00000579378 ZNF608Q9ULD9 1512 aaPredicted RBP15.86■□□□□ 0.13
AC011840.3-201ENST00000579378 CCDC88BA6NC98 1476 aa15.84■□□□□ 0.13
AC011840.3-201ENST00000579378 IFT140Q96RY7 1462 aa15.84■□□□□ 0.13
AC011840.3-201ENST00000579378 TOPBP1Q92547 1522 aa15.79■□□□□ 0.12
AC011840.3-201ENST00000579378 ARHGEF11O15085 1522 aa15.78■□□□□ 0.12
AC011840.3-201ENST00000579378 ABCC8Q09428 1581 aa15.75■□□□□ 0.11
AC011840.3-201ENST00000579378 CYB5RLQ6IPT4 315 aa15.75■□□□□ 0.11
AC011840.3-201ENST00000579378 EIF4G3O43432 1585 aaKnown RBP15.72■□□□□ 0.11
AC011840.3-201ENST00000579378 AQRO60306 1485 aaKnown RBP eCLIP15.71■□□□□ 0.1
AC011840.3-201ENST00000579378 DNMBPQ6XZF7 1577 aa15.7■□□□□ 0.1
AC011840.3-201ENST00000579378 CHD1O14646 1710 aa15.69■□□□□ 0.1
AC011840.3-201ENST00000579378 TARBP1Q13395 1621 aaKnown RBP15.68■□□□□ 0.1
AC011840.3-201ENST00000579378 FBLN2P98095 1184 aa15.67■□□□□ 0.1
AC011840.3-201ENST00000579378 TRHP20396 242 aaPredicted RBP15.63■□□□□ 0.09
AC011840.3-201ENST00000579378 POLA1P09884 1462 aaPredicted RBP15.62■□□□□ 0.09
AC011840.3-201ENST00000579378 ARAP1Q96P48 1450 aa15.61■□□□□ 0.09
AC011840.3-201ENST00000579378 RAD54L2Q9Y4B4 1467 aa15.59■□□□□ 0.09
AC011840.3-201ENST00000579378 TDRD9Q8NDG6 1382 aaKnown RBP15.58■□□□□ 0.08
AC011840.3-201ENST00000579378 SOGA1O94964 1423 aa15.58■□□□□ 0.08
AC011840.3-201ENST00000579378 CHMP7Q8WUX9 453 aaPredicted RBP15.51■□□□□ 0.07
AC011840.3-201ENST00000579378 SNAPC4Q5SXM2 1469 aa15.49■□□□□ 0.07
AC011840.3-201ENST00000579378 FGD5Q6ZNL6 1462 aa15.48■□□□□ 0.07
AC011840.3-201ENST00000579378 CLASP1Q7Z460 1538 aa15.48■□□□□ 0.07
AC011840.3-201ENST00000579378 WDR97A6NE52 1622 aa15.46■□□□□ 0.07
AC011840.3-201ENST00000579378 CUX1P39880 1505 aa15.45■□□□□ 0.06
AC011840.3-201ENST00000579378 SYNJ1O43426 1573 aa15.45■□□□□ 0.06
AC011840.3-201ENST00000579378 MAGI1Q96QZ7 1491 aaPredicted RBP15.44■□□□□ 0.06
AC011840.3-201ENST00000579378 GRIN2BQ13224 1484 aa15.43■□□□□ 0.06
AC011840.3-201ENST00000579378 SYNJ2O15056 1496 aa15.4■□□□□ 0.06
AC011840.3-201ENST00000579378 PBRM1Q86U86 1689 aa15.36■□□□□ 0.05
AC011840.3-201ENST00000579378 GAPVD1Q14C86 1478 aa15.36■□□□□ 0.05
AC011840.3-201ENST00000579378 AEBP2Q6ZN18 517 aaPredicted RBP15.34■□□□□ 0.05
AC011840.3-201ENST00000579378 ABCA10Q8WWZ4 1543 aa15.3■□□□□ 0.04
AC011840.3-201ENST00000579378 ABCA5Q8WWZ7 1642 aa15.28■□□□□ 0.04
AC011840.3-201ENST00000579378 ERCC6L2Q5T890 1561 aa15.24■□□□□ 0.03
AC011840.3-201ENST00000579378 GRIN2AQ12879 1464 aa15.23■□□□□ 0.03
AC011840.3-201ENST00000579378 CEP170Q5SW79 1584 aa15.19■□□□□ 0.02
AC011840.3-201ENST00000579378 NUP160Q12769 1436 aa15.19■□□□□ 0.02
AC011840.3-201ENST00000579378 WRNQ14191 1432 aaPredicted RBP eCLIP15.19■□□□□ 0.02
AC011840.3-201ENST00000579378 SUPT5HO00267 1087 aaKnown RBP15.19■□□□□ 0.02
AC011840.3-201ENST00000579378 ADAMTS12P58397 1594 aa15.17■□□□□ 0.02
AC011840.3-201ENST00000579378 SHROOM2Q13796 1616 aa15.15■□□□□ 0.02
AC011840.3-201ENST00000579378 FHAD1B1AJZ9 1412 aa15.15■□□□□ 0.02
AC011840.3-201ENST00000579378 BIVM-ERCC5R4GMW8 1640 aa15.14■□□□□ 0.01
AC011840.3-201ENST00000579378 TOP2BQ02880 1626 aa15.13■□□□□ 0.01
AC011840.3-201ENST00000579378 KIF13AQ9H1H9 1805 aa15.11■□□□□ 0.01
AC011840.3-201ENST00000579378 JPH4Q96JJ6 628 aa15.11■□□□□ 0.01
AC011840.3-201ENST00000579378 ERICH3Q5RHP9 1530 aa15.1■□□□□ 0.01
AC011840.3-201ENST00000579378 PRG4Q92954 1404 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms