RNA–Protein interactions for RNA: ENST00000579243.1

USH1G-201, Transcript of USH1 protein network component sans, humanhuman

TSL 2

Gene USH1G, Length 1,673 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1G-201ENST00000579243 NISCHQ9Y2I1 1504 aa48.28■■■■■ 5.32
USH1G-201ENST00000579243 CCDC180Q9P1Z9 1646 aa42.88■■■■■ 4.46
USH1G-201ENST00000579243 ABCC9O60706 1549 aa42.1■■■■■ 4.33
USH1G-201ENST00000579243 DCAF8L2P0C7V8 631 aa40.44■■■■■ 4.06
USH1G-201ENST00000579243 RB1CC1Q8TDY2 1594 aa40.43■■■■■ 4.06
USH1G-201ENST00000579243 NACADO15069 1562 aa40.38■■■■■ 4.05
USH1G-201ENST00000579243 ZCCHC6Q5VYS8 1495 aaKnown RBP40.19■■■■■ 4.02
USH1G-201ENST00000579243 MYO15BQ96JP2 1530 aa40.14■■■■■ 4.02
USH1G-201ENST00000579243 DCAF1Q9Y4B6 1507 aa39.93■■■■□ 3.98
USH1G-201ENST00000579243 UNC13AQ9UPW8 1703 aa39.47■■■■□ 3.91
USH1G-201ENST00000579243 PABPN1Q86U42 306 aaKnown RBP eCLIP39.38■■■■□ 3.9
USH1G-201ENST00000579243 BICRAQ9NZM4 1560 aa39.23■■■■□ 3.87
USH1G-201ENST00000579243 SCRIBQ14160 1630 aa39.16■■■■□ 3.86
USH1G-201ENST00000579243 DNAJC5BQ9UF47 199 aa38.79■■■■□ 3.8
USH1G-201ENST00000579243 SHROOM4Q9ULL8 1493 aa38.79■■■■□ 3.8
USH1G-201ENST00000579243 EIF4G1Q04637 1599 aaKnown RBP38.19■■■■□ 3.7
USH1G-201ENST00000579243 CC2D2AQ9P2K1 1620 aa38.06■■■■□ 3.68
USH1G-201ENST00000579243 CECR2Q9BXF3 1484 aa37.84■■■■□ 3.65
USH1G-201ENST00000579243 SMARCA4P51532 1647 aa37.45■■■■□ 3.59
USH1G-201ENST00000579243 BAZ1AQ9NRL2 1556 aaPredicted RBP37.4■■■■□ 3.58
USH1G-201ENST00000579243 NCAPD3P42695 1498 aa37.31■■■■□ 3.56
USH1G-201ENST00000579243 ATAD2BQ9ULI0 1458 aa37.31■■■■□ 3.56
USH1G-201ENST00000579243 SMARCA2P51531 1590 aa37.22■■■■□ 3.55
USH1G-201ENST00000579243 MROH2BQ7Z745 1585 aa37.22■■■■□ 3.55
USH1G-201ENST00000579243 PEG3Q9GZU2 1588 aa37.1■■■■□ 3.53
USH1G-201ENST00000579243 HMGXB3Q12766 1538 aa37.06■■■■□ 3.52
USH1G-201ENST00000579243 BAZ1BQ9UIG0 1483 aaKnown RBP36.97■■■■□ 3.51
USH1G-201ENST00000579243 RSF1Q96T23 1441 aaPredicted RBP36.79■■■■□ 3.48
USH1G-201ENST00000579243 WIZO95785 1651 aa36.78■■■■□ 3.48
USH1G-201ENST00000579243 NESP48681 1621 aa36.42■■■■□ 3.42
USH1G-201ENST00000579243 TOP2AP11388 1531 aaKnown RBP36.38■■■■□ 3.41
USH1G-201ENST00000579243 LAMC3Q9Y6N6 1575 aa36.28■■■■□ 3.4
USH1G-201ENST00000579243 ERCC6Q03468 1493 aa36.28■■■■□ 3.4
USH1G-201ENST00000579243 CADPSQ9ULU8 1353 aa36.22■■■■□ 3.39
USH1G-201ENST00000579243 PDS5BQ9NTI5 1447 aa36.08■■■■□ 3.37
USH1G-201ENST00000579243 CCDC88BA6NC98 1476 aa36.01■■■■□ 3.36
USH1G-201ENST00000579243 CFTRP13569 1480 aa35.99■■■■□ 3.35
USH1G-201ENST00000579243 KIF21AQ7Z4S6 1674 aa35.92■■■■□ 3.34
USH1G-201ENST00000579243 CUX2O14529 1486 aa35.92■■■■□ 3.34
USH1G-201ENST00000579243 SUPT5HO00267 1087 aaKnown RBP35.84■■■■□ 3.33
USH1G-201ENST00000579243 THOC2Q8NI27 1593 aaKnown RBP35.83■■■■□ 3.33
USH1G-201ENST00000579243 FANCD2Q9BXW9 1451 aa35.78■■■■□ 3.32
USH1G-201ENST00000579243 CEP164Q9UPV0 1460 aa35.72■■■■□ 3.31
USH1G-201ENST00000579243 MRC2Q9UBG0 1479 aa35.69■■■■□ 3.3
USH1G-201ENST00000579243 PRDM2Q13029 1718 aa35.58■■■■□ 3.29
USH1G-201ENST00000579243 WDR62O43379 1518 aa35.57■■■■□ 3.28
USH1G-201ENST00000579243 URB2Q14146 1524 aaKnown RBP35.43■■■■□ 3.26
USH1G-201ENST00000579243 TOPBP1Q92547 1522 aa35.2■■■■□ 3.23
USH1G-201ENST00000579243 ABCC8Q09428 1581 aa35.19■■■■□ 3.22
USH1G-201ENST00000579243 DNMBPQ6XZF7 1577 aa35.12■■■■□ 3.21
USH1G-201ENST00000579243 IFT140Q96RY7 1462 aa35■■■■□ 3.19
USH1G-201ENST00000579243 DNAJC5Q9H3Z4 198 aa34.97■■■■□ 3.19
USH1G-201ENST00000579243 CUX1P39880 1505 aa34.91■■■■□ 3.18
USH1G-201ENST00000579243 POLA1P09884 1462 aaPredicted RBP34.9■■■■□ 3.18
USH1G-201ENST00000579243 ZNF608Q9ULD9 1512 aaPredicted RBP34.86■■■■□ 3.17
USH1G-201ENST00000579243 TARBP1Q13395 1621 aaKnown RBP34.8■■■■□ 3.16
USH1G-201ENST00000579243 FGD5Q6ZNL6 1462 aa34.79■■■■□ 3.16
USH1G-201ENST00000579243 SOGA1O94964 1423 aa34.78■■■■□ 3.16
USH1G-201ENST00000579243 RAD54L2Q9Y4B4 1467 aa34.77■■■■□ 3.16
USH1G-201ENST00000579243 AQRO60306 1485 aaKnown RBP eCLIP34.68■■■■□ 3.14
USH1G-201ENST00000579243 WRNQ14191 1432 aaPredicted RBP eCLIP34.67■■■■□ 3.14
USH1G-201ENST00000579243 EIF4G3O43432 1585 aaKnown RBP34.66■■■■□ 3.14
USH1G-201ENST00000579243 TDRD9Q8NDG6 1382 aaKnown RBP34.61■■■■□ 3.13
USH1G-201ENST00000579243 TOP2BQ02880 1626 aa34.57■■■■□ 3.12
USH1G-201ENST00000579243 SYNJ1O43426 1573 aa34.56■■■■□ 3.12
USH1G-201ENST00000579243 BIVM-ERCC5R4GMW8 1640 aa34.54■■■■□ 3.12
USH1G-201ENST00000579243 WDR97A6NE52 1622 aa34.49■■■■□ 3.11
USH1G-201ENST00000579243 OSCARQ8IYS5 282 aa34.49■■■■□ 3.11
USH1G-201ENST00000579243 ABCA10Q8WWZ4 1543 aa34.47■■■■□ 3.11
USH1G-201ENST00000579243 GRIN2BQ13224 1484 aa34.36■■■■□ 3.09
USH1G-201ENST00000579243 GAPVD1Q14C86 1478 aa34.36■■■■□ 3.09
USH1G-201ENST00000579243 SNAPC4Q5SXM2 1469 aa34.31■■■■□ 3.08
USH1G-201ENST00000579243 ABCA5Q8WWZ7 1642 aa34.29■■■■□ 3.08
USH1G-201ENST00000579243 FBLN2P98095 1184 aa34.28■■■■□ 3.08
USH1G-201ENST00000579243 MAGI1Q96QZ7 1491 aaPredicted RBP34.26■■■■□ 3.08
USH1G-201ENST00000579243 CHD1O14646 1710 aa34.21■■■■□ 3.07
USH1G-201ENST00000579243 PBRM1Q86U86 1689 aa34.21■■■■□ 3.07
USH1G-201ENST00000579243 CHMP7Q8WUX9 453 aaPredicted RBP34.19■■■■□ 3.06
USH1G-201ENST00000579243 SYNJ2O15056 1496 aa34.14■■■■□ 3.06
USH1G-201ENST00000579243 ERICH3Q5RHP9 1530 aa34.04■■■■□ 3.04
USH1G-201ENST00000579243 ADAMTS12P58397 1594 aa33.97■■■■□ 3.03
USH1G-201ENST00000579243 FHAD1B1AJZ9 1412 aa33.96■■■■□ 3.03
USH1G-201ENST00000579243 KIF27Q86VH2 1401 aa33.96■■■■□ 3.03
USH1G-201ENST00000579243 GRIN2AQ12879 1464 aa33.91■■■■□ 3.02
USH1G-201ENST00000579243 CLASP1Q7Z460 1538 aa33.88■■■■□ 3.01
USH1G-201ENST00000579243 IGF1RP08069 1367 aa33.87■■■■□ 3.01
USH1G-201ENST00000579243 ARHGEF11O15085 1522 aa33.86■■■■□ 3.01
USH1G-201ENST00000579243 RIMBP3CA6NJZ7 1639 aa33.86■■■■□ 3.01
USH1G-201ENST00000579243 RIMBP3BA6NNM3 1639 aa33.86■■■■□ 3.01
USH1G-201ENST00000579243 RIMBP3Q9UFD9 1639 aa33.86■■■■□ 3.01
USH1G-201ENST00000579243 TRIM41Q8WV44 630 aa33.85■■■■□ 3.01
USH1G-201ENST00000579243 NUP160Q12769 1436 aa33.77■■■■□ 3
USH1G-201ENST00000579243 CEP170Q5SW79 1584 aa33.73■■■□□ 2.99
USH1G-201ENST00000579243 CUL7Q14999 1698 aa33.68■■■□□ 2.98
USH1G-201ENST00000579243 CARMIL1Q5VZK9 1371 aa33.65■■■□□ 2.98
USH1G-201ENST00000579243 RUSC2Q8N2Y8 1516 aa33.65■■■□□ 2.98
USH1G-201ENST00000579243 CYB5RLQ6IPT4 315 aa33.62■■■□□ 2.97
USH1G-201ENST00000579243 ARAP1Q96P48 1450 aa33.6■■■□□ 2.97
USH1G-201ENST00000579243 SHROOM2Q13796 1616 aa33.49■■■□□ 2.95
USH1G-201ENST00000579243 JPH4Q96JJ6 628 aa33.48■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms