RNA–Protein interactions for RNA: ENST00000579225.2

SRGAP2-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 3

Gene SRGAP2, Length 1,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-204ENST00000579225 NISCHQ9Y2I1 1504 aa42.4■■■■■ 4.38
SRGAP2-204ENST00000579225 ABCC9O60706 1549 aa38.35■■■■□ 3.73
SRGAP2-204ENST00000579225 CCDC180Q9P1Z9 1646 aa38.08■■■■□ 3.69
SRGAP2-204ENST00000579225 RB1CC1Q8TDY2 1594 aa36.39■■■■□ 3.42
SRGAP2-204ENST00000579225 DNAJC5BQ9UF47 199 aa36.25■■■■□ 3.39
SRGAP2-204ENST00000579225 NACADO15069 1562 aa36.1■■■■□ 3.37
SRGAP2-204ENST00000579225 DCAF8L2P0C7V8 631 aa35.93■■■■□ 3.34
SRGAP2-204ENST00000579225 PABPN1Q86U42 306 aaKnown RBP eCLIP35.72■■■■□ 3.31
SRGAP2-204ENST00000579225 MYO15BQ96JP2 1530 aa35.54■■■■□ 3.28
SRGAP2-204ENST00000579225 UNC13AQ9UPW8 1703 aa35.52■■■■□ 3.28
SRGAP2-204ENST00000579225 BICRAQ9NZM4 1560 aa35.35■■■■□ 3.25
SRGAP2-204ENST00000579225 ZCCHC6Q5VYS8 1495 aaKnown RBP35.07■■■■□ 3.2
SRGAP2-204ENST00000579225 DCAF1Q9Y4B6 1507 aa35■■■■□ 3.19
SRGAP2-204ENST00000579225 SHROOM4Q9ULL8 1493 aa34.84■■■■□ 3.17
SRGAP2-204ENST00000579225 SCRIBQ14160 1630 aa34.7■■■■□ 3.14
SRGAP2-204ENST00000579225 CC2D2AQ9P2K1 1620 aa34.62■■■■□ 3.13
SRGAP2-204ENST00000579225 CECR2Q9BXF3 1484 aa34.58■■■■□ 3.13
SRGAP2-204ENST00000579225 EIF4G1Q04637 1599 aaKnown RBP34.49■■■■□ 3.11
SRGAP2-204ENST00000579225 DNAJC5Q9H3Z4 198 aa33.44■■■□□ 2.94
SRGAP2-204ENST00000579225 NCAPD3P42695 1498 aa33.37■■■□□ 2.93
SRGAP2-204ENST00000579225 ATAD2BQ9ULI0 1458 aa33.21■■■□□ 2.91
SRGAP2-204ENST00000579225 CUX2O14529 1486 aa33.14■■■□□ 2.9
SRGAP2-204ENST00000579225 ERCC6Q03468 1493 aa33.12■■■□□ 2.89
SRGAP2-204ENST00000579225 SMARCA4P51532 1647 aa33.09■■■□□ 2.89
SRGAP2-204ENST00000579225 SMARCA2P51531 1590 aa33.08■■■□□ 2.89
SRGAP2-204ENST00000579225 HMGXB3Q12766 1538 aa33.04■■■□□ 2.88
SRGAP2-204ENST00000579225 BAZ1AQ9NRL2 1556 aaPredicted RBP32.91■■■□□ 2.86
SRGAP2-204ENST00000579225 NESP48681 1621 aa32.89■■■□□ 2.86
SRGAP2-204ENST00000579225 BAZ1BQ9UIG0 1483 aaKnown RBP32.86■■■□□ 2.85
SRGAP2-204ENST00000579225 PEG3Q9GZU2 1588 aa32.79■■■□□ 2.84
SRGAP2-204ENST00000579225 MROH2BQ7Z745 1585 aa32.66■■■□□ 2.82
SRGAP2-204ENST00000579225 LAMC3Q9Y6N6 1575 aa32.6■■■□□ 2.81
SRGAP2-204ENST00000579225 THOC2Q8NI27 1593 aaKnown RBP32.55■■■□□ 2.8
SRGAP2-204ENST00000579225 PDS5BQ9NTI5 1447 aa32.45■■■□□ 2.79
SRGAP2-204ENST00000579225 KIF21AQ7Z4S6 1674 aa32.4■■■□□ 2.78
SRGAP2-204ENST00000579225 CADPSQ9ULU8 1353 aa32.34■■■□□ 2.77
SRGAP2-204ENST00000579225 WIZO95785 1651 aa32.24■■■□□ 2.75
SRGAP2-204ENST00000579225 MRC2Q9UBG0 1479 aa32.16■■■□□ 2.74
SRGAP2-204ENST00000579225 WDR62O43379 1518 aa32.08■■■□□ 2.73
SRGAP2-204ENST00000579225 CEP164Q9UPV0 1460 aa31.98■■■□□ 2.71
SRGAP2-204ENST00000579225 FANCD2Q9BXW9 1451 aa31.95■■■□□ 2.7
SRGAP2-204ENST00000579225 RSF1Q96T23 1441 aaPredicted RBP31.93■■■□□ 2.7
SRGAP2-204ENST00000579225 CFTRP13569 1480 aa31.91■■■□□ 2.7
SRGAP2-204ENST00000579225 TRIM41Q8WV44 630 aa31.84■■■□□ 2.69
SRGAP2-204ENST00000579225 TOP2AP11388 1531 aaKnown RBP31.81■■■□□ 2.68
SRGAP2-204ENST00000579225 URB2Q14146 1524 aaKnown RBP31.7■■■□□ 2.67
SRGAP2-204ENST00000579225 OSCARQ8IYS5 282 aa31.66■■■□□ 2.66
SRGAP2-204ENST00000579225 CCDC88BA6NC98 1476 aa31.5■■■□□ 2.63
SRGAP2-204ENST00000579225 PRDM2Q13029 1718 aa31.48■■■□□ 2.63
SRGAP2-204ENST00000579225 IFT140Q96RY7 1462 aa31.37■■■□□ 2.61
SRGAP2-204ENST00000579225 ZNF608Q9ULD9 1512 aaPredicted RBP31.35■■■□□ 2.61
SRGAP2-204ENST00000579225 TOPBP1Q92547 1522 aa31.31■■■□□ 2.6
SRGAP2-204ENST00000579225 ABCC8Q09428 1581 aa31.24■■■□□ 2.59
SRGAP2-204ENST00000579225 RIMBP3CA6NJZ7 1639 aa31.19■■■□□ 2.58
SRGAP2-204ENST00000579225 RIMBP3BA6NNM3 1639 aa31.19■■■□□ 2.58
SRGAP2-204ENST00000579225 RIMBP3Q9UFD9 1639 aa31.19■■■□□ 2.58
SRGAP2-204ENST00000579225 DNMBPQ6XZF7 1577 aa31.16■■■□□ 2.58
SRGAP2-204ENST00000579225 EIF4G3O43432 1585 aaKnown RBP31.11■■■□□ 2.57
SRGAP2-204ENST00000579225 ARHGEF11O15085 1522 aa31.08■■■□□ 2.57
SRGAP2-204ENST00000579225 AQRO60306 1485 aaKnown RBP eCLIP31.06■■■□□ 2.56
SRGAP2-204ENST00000579225 TARBP1Q13395 1621 aaKnown RBP31.05■■■□□ 2.56
SRGAP2-204ENST00000579225 POLA1P09884 1462 aaPredicted RBP30.98■■■□□ 2.55
SRGAP2-204ENST00000579225 CYB5RLQ6IPT4 315 aa30.92■■■□□ 2.54
SRGAP2-204ENST00000579225 CHD1O14646 1710 aa30.92■■■□□ 2.54
SRGAP2-204ENST00000579225 FBLN2P98095 1184 aa30.91■■■□□ 2.54
SRGAP2-204ENST00000579225 RAD54L2Q9Y4B4 1467 aa30.89■■■□□ 2.54
SRGAP2-204ENST00000579225 SOGA1O94964 1423 aa30.87■■■□□ 2.53
SRGAP2-204ENST00000579225 TDRD9Q8NDG6 1382 aaKnown RBP30.84■■■□□ 2.53
SRGAP2-204ENST00000579225 ARAP1Q96P48 1450 aa30.76■■■□□ 2.52
SRGAP2-204ENST00000579225 FGD5Q6ZNL6 1462 aa30.76■■■□□ 2.51
SRGAP2-204ENST00000579225 SNAPC4Q5SXM2 1469 aa30.7■■■□□ 2.5
SRGAP2-204ENST00000579225 WDR97A6NE52 1622 aa30.69■■■□□ 2.5
SRGAP2-204ENST00000579225 CUX1P39880 1505 aa30.69■■■□□ 2.5
SRGAP2-204ENST00000579225 CHMP7Q8WUX9 453 aaPredicted RBP30.66■■■□□ 2.5
SRGAP2-204ENST00000579225 TRHP20396 242 aaPredicted RBP30.64■■■□□ 2.5
SRGAP2-204ENST00000579225 MAGI1Q96QZ7 1491 aaPredicted RBP30.62■■■□□ 2.49
SRGAP2-204ENST00000579225 GRIN2BQ13224 1484 aa30.6■■■□□ 2.49
SRGAP2-204ENST00000579225 CLASP1Q7Z460 1538 aa30.59■■■□□ 2.49
SRGAP2-204ENST00000579225 SYNJ1O43426 1573 aa30.54■■■□□ 2.48
SRGAP2-204ENST00000579225 SYNJ2O15056 1496 aa30.52■■■□□ 2.48
SRGAP2-204ENST00000579225 GAPVD1Q14C86 1478 aa30.47■■■□□ 2.47
SRGAP2-204ENST00000579225 PBRM1Q86U86 1689 aa30.4■■■□□ 2.46
SRGAP2-204ENST00000579225 ABCA10Q8WWZ4 1543 aa30.4■■■□□ 2.46
SRGAP2-204ENST00000579225 SUPT5HO00267 1087 aaKnown RBP30.38■■■□□ 2.45
SRGAP2-204ENST00000579225 ABCA5Q8WWZ7 1642 aa30.34■■■□□ 2.45
SRGAP2-204ENST00000579225 WRNQ14191 1432 aaPredicted RBP eCLIP30.25■■■□□ 2.43
SRGAP2-204ENST00000579225 GRIN2AQ12879 1464 aa30.2■■■□□ 2.43
SRGAP2-204ENST00000579225 TOP2BQ02880 1626 aa30.13■■■□□ 2.41
SRGAP2-204ENST00000579225 ADAMTS12P58397 1594 aa30.12■■■□□ 2.41
SRGAP2-204ENST00000579225 NUP160Q12769 1436 aa30.12■■■□□ 2.41
SRGAP2-204ENST00000579225 ERCC6L2Q5T890 1561 aa30.11■■■□□ 2.41
SRGAP2-204ENST00000579225 BIVM-ERCC5R4GMW8 1640 aa30.11■■■□□ 2.41
SRGAP2-204ENST00000579225 CEP170Q5SW79 1584 aa30.09■■■□□ 2.41
SRGAP2-204ENST00000579225 FHAD1B1AJZ9 1412 aa30.08■■■□□ 2.41
SRGAP2-204ENST00000579225 ERICH3Q5RHP9 1530 aa30.01■■■□□ 2.39
SRGAP2-204ENST00000579225 SHROOM2Q13796 1616 aa29.98■■■□□ 2.39
SRGAP2-204ENST00000579225 AEBP2Q6ZN18 517 aaPredicted RBP29.89■■■□□ 2.38
SRGAP2-204ENST00000579225 JPH4Q96JJ6 628 aa29.86■■■□□ 2.37
SRGAP2-204ENST00000579225 PRG4Q92954 1404 aaPredicted RBP29.86■■■□□ 2.37
SRGAP2-204ENST00000579225 RUSC2Q8N2Y8 1516 aa29.7■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms